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Metabolites, Volume 2, Issue 3

September 2012 - 13 articles

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Articles (13)

  • Article
  • Open Access
8 Citations
7,409 Views
16 Pages

A Topological Characterization of Medium-Dependent Essential Metabolic Reactions

  • Nikolaus Sonnenschein,
  • Carsten Marr and
  • Marc-Thorsten Hütt

24 September 2012

Metabolism has frequently been analyzed from a network perspective. A major question is how network properties correlate with biological features like growth rates, flux patterns and enzyme essentiality. Using methods from graph theory as well as est...

  • Review
  • Open Access
37 Citations
8,190 Views
18 Pages

12 September 2012

Inferring decreased or increased metabolic functions from transcript profiles is at first sight a bold and speculative attempt because of the functional layers in between: proteins, enzymatic activities, and reaction fluxes. However, the growing inte...

  • Review
  • Open Access
6 Citations
8,344 Views
29 Pages

11 September 2012

A minimal cut set is a minimal set of reactions whose inactivation would guarantee a failure in a certain network function or functions. Minimal cut sets (MCSs) were initially developed from the metabolic pathway analysis method (MPA) of elementary m...

  • Article
  • Open Access
27 Citations
12,813 Views
18 Pages

Metabolic and Pharmacokinetic Differentiation of STX209 and Racemic Baclofen in Humans

  • Raymundo Sanchez-Ponce,
  • Li-Quan Wang,
  • Wei Lu,
  • Jana Von Hehn,
  • Maryann Cherubini and
  • Roger Rush

11 September 2012

STX209 is an exploratory drug comprising the single, active R-enantiomer of baclofen which is in later stage clinical trials for the treatment of fragile x syndrome (FXS) and autism spectrum disorders (ASD). New clinical data in this article on the m...

  • Review
  • Open Access
13 Citations
7,621 Views
14 Pages

6 September 2012

Due to their sessile lifestyle, plants are exposed to a large set of environmental cues. In order to cope with changes in environmental conditions a multitude of complex strategies to regulate metabolism has evolved. The complexity is mainly attribut...

  • Review
  • Open Access
9 Citations
11,185 Views
24 Pages

Optimality Principles in the Regulation of Metabolic Networks

  • Jan Berkhout,
  • Frank J. Bruggeman and
  • Bas Teusink

29 August 2012

One of the challenging tasks in systems biology is to understand how molecular networks give rise to emergent functionality and whether universal design principles apply to molecular networks. To achieve this, the biophysical, evolutionary and physio...

  • Review
  • Open Access
143 Citations
14,585 Views
13 Pages

Polyamines under Abiotic Stress: Metabolic Crossroads and Hormonal Crosstalks in Plants

  • Marta Bitrián,
  • Xavier Zarza,
  • Teresa Altabella,
  • Antonio F. Tiburcio and
  • Rubén Alcázar

20 August 2012

Polyamines are essential compounds for cell survival and have key roles in plant stress protection. Current evidence points to the occurrence of intricate cross-talks between polyamines, stress hormones and other metabolic pathways required for their...

  • Review
  • Open Access
47 Citations
9,229 Views
20 Pages

Separation Technique for the Determination of Highly Polar Metabolites in Biological Samples

  • Yusuke Iwasaki,
  • Takahiro Sawada,
  • Kentaro Hatayama,
  • Akihito Ohyagi,
  • Yuri Tsukuda,
  • Kyohei Namekawa,
  • Rie Ito,
  • Koichi Saito and
  • Hiroyuki Nakazawa

16 August 2012

Metabolomics is a new approach that is based on the systematic study of the full complement of metabolites in a biological sample. Metabolomics has the potential to fundamentally change clinical chemistry and, by extension, the fields of nutrition, t...

  • Article
  • Open Access
15 Citations
11,128 Views
17 Pages

1H Nuclear Magnetic Resonance (NMR) Metabolomic Study of Chronic Organophosphate Exposure in Rats

  • Todd M. Alam,
  • Muniasamy Neerathilingam,
  • M. Kathleen Alam,
  • David E. Volk,
  • G. A. Shakeel Ansari,
  • Swapna Sarkar and
  • Bruce A. Luxon

24 July 2012

1H NMR spectroscopy and chemometric analysis were used to characterize rat urine obtained after chronic exposure to either tributyl phosphate (TBP) or triphenyl phosphate (TPP). In this study, the daily dose exposure was 1.5 mg/kg body weight for TBP...

  • Article
  • Open Access
5 Citations
6,442 Views
21 Pages

16 July 2012

Hypermetabolism is a significant sequela to severe trauma such as burns, as well as critical illnesses such as cancer. It persists in parallel to, or beyond, the original pathology for many months as an often-fatal comorbidity. Currently, diagnosis i...

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Metabolites - ISSN 2218-1989