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Life, Volume 6, Issue 3

2016 September - 15 articles

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Articles (15)

  • Article
  • Open Access
45 Citations
15,430 Views
25 Pages

Functional Annotations of Paralogs: A Blessing and a Curse

  • Rémi Zallot,
  • Katherine J. Harrison,
  • Bryan Kolaczkowski and
  • Valérie De Crécy-Lagard

8 September 2016

Gene duplication followed by mutation is a classic mechanism of neofunctionalization, producing gene families with functional diversity. In some cases, a single point mutation is sufficient to change the substrate specificity and/or the chemistry per...

(This article belongs to the Section Genomics and Proteomics)
  • Article
  • Open Access
4 Citations
7,551 Views
11 Pages

6 September 2016

Increasing evidence suggests that bdelloid rotifers regularly undergo horizontal gene transfer, apparently as a surrogate mechanism of genetic exchange in the absence of true sexual reproduction, in part because of their ability to withstand desiccat...

(This article belongs to the Section Genomics and Proteomics)
  • Article
  • Open Access
14 Citations
9,558 Views
11 Pages

2 September 2016

Halophilic archaea experience high levels of ultraviolet (UV) light in their environments and demonstrate resistance to UV irradiation. DNA repair systems and carotenoids provide UV protection but do not account for the high resistance observed. Here...

(This article belongs to the Special Issue Proceedings from the 11th Conference on Halophilic Microorganisms Halophiles 2016)
  • Editorial
  • Open Access
10 Citations
11,936 Views
5 Pages

25 August 2016

Francis Crick (Figure 1) was born on 8 June 1916, in Northampton, England, and passed away on 28 July 2004, in La Jolla, California, USA.[...]

(This article belongs to the Special Issue The Origin and Evolution of the Genetic Code: 100th Anniversary Year of the Birth of Francis Crick)
  • Article
  • Open Access
1 Citations
6,327 Views
9 Pages

20 August 2016

In recent years, biodiesel, a substitute for fossil fuels, has led to the excessive production of crude glycerol. The resulting crude glycerol can possess a high concentration of salts and an alkaline pH. Moreover, current crude glycerol purification...

(This article belongs to the Special Issue Proceedings from the 11th Conference on Halophilic Microorganisms Halophiles 2016)
  • Concept Paper
  • Open Access
25 Citations
8,101 Views
8 Pages

Pressure as a Limiting Factor for Life

  • Rachael Hazael,
  • Filip Meersman,
  • Fumihisa Ono and
  • Paul F. McMillan

17 August 2016

Facts concerning the stability and functioning of key biomolecular components suggest that cellular life should no longer be viable above a few thousand atmospheres (200–300 MPa). However, organisms are seen to survive in the laboratory to much highe...

(This article belongs to the Special Issue The Physico-Chemical Limits of Life)
  • Review
  • Open Access
46 Citations
16,856 Views
15 Pages

11 August 2016

We propose that the first step in the origin of cellular life on Earth was the self-assembly of fatty acids with the building blocks of RNA and protein, resulting in a stable aggregate. This scheme provides explanations for the selection and concentr...

(This article belongs to the Special Issue Origin of Cellular Life)
  • Opinion
  • Open Access
9 Citations
7,288 Views
9 Pages

Ultra Large Gene Families: A Matter of Adaptation or Genomic Parasites?

  • Philipp H. Schiffer,
  • Jan Gravemeyer,
  • Martina Rauscher and
  • Thomas Wiehe

8 August 2016

Gene duplication is an important mechanism of molecular evolution. It offers a fast track to modification, diversification, redundancy or rescue of gene function. However, duplication may also be neutral or (slightly) deleterious, and often ends in p...

(This article belongs to the Special Issue Structure and Evolution of Genome)
  • Article
  • Open Access
2 Citations
6,288 Views
18 Pages

3 August 2016

The existence of multiple copies of genes is a well-known phenomenon. A gene family is a set of sufficiently similar genes, formed by gene duplication. In earlier works conducted on a limited number of completely sequenced and annotated genomes it wa...

(This article belongs to the Special Issue Structure and Evolution of Genome)
  • Article
  • Open Access
5,317 Views
13 Pages

3 August 2016

Haloferax volcanii AglM and Halobacterium salinarum VNG1048G are UDP-glucose dehydrogenases involved in N-glycosylation in each species. Despite sharing >60% sequence identity and the ability of VNG1048G to functionally replace AglM in vivo, these...

(This article belongs to the Special Issue Proceedings from the 11th Conference on Halophilic Microorganisms Halophiles 2016)
  • Article
  • Open Access
7 Citations
12,802 Views
19 Pages

2 August 2016

RNA played a central role in the emergence of the first life-like system on primitive Earth since RNA molecules contain both genetic information and catalytic activity. However, there are several drawbacks regarding the RNA world hypothesis. Here, I...

(This article belongs to the Special Issue Origin of Cellular Life)
  • Article
  • Open Access
128 Citations
12,774 Views
12 Pages

26 July 2016

The endoergic nature of protein and nucleic acid assembly in aqueous media presents two questions that are fundamental to the understanding of life’s origins: (i) how did the polymers arise in an aqueous prebiotic world; and (ii) once formed in some...

(This article belongs to the Special Issue The Emergence of Life: From Chemical Origins to Synthetic Biology)
  • Article
  • Open Access
12 Citations
8,260 Views
10 Pages

Conservation of the Exon-Intron Structure of Long Intergenic Non-Coding RNA Genes in Eutherian Mammals

  • Diana Chernikova,
  • David Managadze,
  • Galina V. Glazko,
  • Wojciech Makalowski and
  • Igor B. Rogozin

15 July 2016

The abundance of mammalian long intergenic non-coding RNA (lincRNA) genes is high, yet their functions remain largely unknown. One possible way to study this important question is to use large-scale comparisons of various characteristics of lincRNA w...

(This article belongs to the Special Issue Structure and Evolution of Genome)
  • Review
  • Open Access
22 Citations
12,208 Views
12 Pages

13 July 2016

The mystery of the origin of life can be divided into two parts. The first part is the origin of biomolecules: under what physicochemical conditions did biomolecules such as amino acids, nucleotides, and their polymers arise? The second part of the m...

(This article belongs to the Special Issue Origin of Cellular Life)
  • Essay
  • Open Access
33 Citations
26,025 Views
27 Pages

30 June 2016

Life on Earth provides a unique biological record from single-cell microbes to technologically intelligent life forms. Our evolution is marked by several major steps or innovations along a path of increasing complexity from microbes to space-faring h...

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Life - ISSN 2075-1729