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Journal of Fungi publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic and all Special Issue submissions follow MDPI's standard editorial process. The journal’s Editor-in-Chief and/or designated Editorial Board Member will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. Further information on MDPI's Special Issue policies and Guest Editor responsibilities can be found here. For any inquiries related to a Special Issue, please contact the Editorial Office.

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Fungal Infections: New Challenges and Opportunities, 3rd Edition

edited by

Célia F. Rodrigues

and

Lucia Černáková

submission deadline 31 Aug 2025 | 5 articles | Viewed by 3346 | Submission Open

Keywords: fungi; infection; antifungal resistance; Candida spp.; Aspergillus spp.; co-infection; detection method; identification; alternative treatment; virulence

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Pathogenic Mechanisms and Biological Control in Entomopathogenic Fungi

edited by Guoxiong Peng and

Senmiao Tong

submission deadline 31 Aug 2025 | 2 articles | Viewed by 2982 | Submission Open

Keywords: fungi; virulence; insect; immunity; metabolites; infection; biological control; microbiota

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Control of Postharvest Fungal Diseases, 2nd Edition

edited by

Huali Xue

submission deadline 31 Aug 2025 | 4 articles | Viewed by 2348 | Submission Open

Keywords: plant disease; induced resistance; mycotoxin; disease control; pathogenic fungi; isolation and identification

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Fungal Diversity in Europe, 3rd Edition

edited by

Giuseppe Venturella

submission deadline 31 Aug 2025 | 3 articles | Viewed by 2108 | Submission Open

Keywords: fungi checklists; Europe; diversity; ecology; conservation

(This special issue belongs to the Section Fungal Evolution, Biodiversity and Systematics)

Proteomic Studies of Pathogenic Fungi and Hosts

edited by Lucélia Santi

submission deadline 31 Aug 2025 | 2 articles | Viewed by 1546 | Submission Open

Keywords: pathogenic fungus; proteomics; host– pathogen interaction

Human Fungal Pathogens: Emerging Threats, Diagnostic and Therapeutic Innovations and Global Impacts

edited by

Maria José Soares Mendes Giannini

Ana Marisa Fusco Almeida

Angel Gonzalez Marin

and

Marcia S.C. Melhem

submission deadline 31 Aug 2025 | 2 articles | Viewed by 1433 | Submission Open

Keywords: fungal pathogens; newly emerging and newly recognized infections; geographical spread of infections; drug-resistant fungi; microbial adaptation and evolution; human susceptibility to infection; one health approach to fungal infections; changing ecosystems; biofilms fungi and their microbial interactions; molecular tools to study host-pathogen interactions; new or improved diagnostic methods

Antifungal Resistance Mechanisms from a One Health Perspective

edited by

Felipe Queiroga Sarmento Guerra

and

Edeltrudes O. Lima

submission deadline 31 Aug 2025 | 1 articles | Viewed by 1173 | Submission Open

Keywords: antifungal resistance; molecular mechanisms of resistance; One Health; environmental mycology; phytopalogy and zoonotic diseases

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Research Progress on Edible Fungi

edited by

Shujing Sun

submission deadline 31 Aug 2025 | 1 articles | Viewed by 1044 | Submission Open

Keywords: genetic diversity; signal transduction regulation; genetic manipulation; breeding; physiology

Candida and Candidiasis: From Basics to Clinics

edited by

Arnaldo Lopes Colombo

and Marcello Mihailenko Chaves Magri

submission deadline 31 Aug 2025 | 1 articles | Viewed by 937 | Submission Open

Keywords: Candida and candidiasis ; taxonomy; genetics; and molecular biology ; pathogenesis ; host-pathogen interactions ; epidemiology ; antifungal resistance ; emerging Candida species ; diagnosis and treatment ; protocols ; immune responses ; antifungal therapy

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Basic Science and Clinical Research of Coccidioides and Coccidioidomycosis

edited by

Jose Luis Lopez-Ribot

and

Chiung-Yu Hung

submission deadline 31 Aug 2025 | Viewed by 306 | Submission Open

Keywords: Coccidioides spp.; coccidioidomycosis; vaccine development; medical mycology

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Latest Research on the Fungal Cell Wall

edited by

Hector M. Mora-Montes

submission deadline 31 Aug 2025 | Viewed by 260 | Submission Open

Keywords: virulence factor; polysaccharides; immune sensing; immune evasion; antifungal drugs; mycosis; diagnosis; glucan; chitin; glycans

Recent Advances in Clinical Mycology

edited by Christopher P. Eades

submission deadline 31 Aug 2025 | Viewed by 192 | Submission Open

Keywords: fungal disease; mycoses; clinical science; laboratory; diagnostics; antifungals

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Bioinformatics and Current Techniques in Medical Mycology: Combining Laboratory and Clinical Viewpoints

edited by

Dejan Stojković

and

Ana Ćirić

submission deadline 31 Aug 2025 | Viewed by 127 | Submission Open

Keywords: medical mycology; fungal infections; antifungal resistance; bioinformatics in mycology; diagnostic advancements; host– pathogen interactions; antifungal therapy; epidemiology of fungal diseases; translational mycology; clinical mycology

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Yeasts’ Excellent Contribution to Beverage Fermentation

edited by Christian Ariel Lopes and

María Angélica Ganga

submission deadline 31 Aug 2025 | Viewed by 96 | Submission Open

Keywords: wine yeasts; cider yeasts; brewing yeasts; traditional fermentation; yeast diversity; yeast metabolism; flavor; mixed cultures; starter cultures; spoilage yeasts; sustainable fermentation processes

Edible and Medicinal Macrofungi, 4th Edition

edited by

Ruilin Zhao

and

Ling Liu

submission deadline 31 Aug 2025 | Viewed by 85 | Submission Open

Keywords: mushroom; evolution; phylogeny; biology; bioactive compound

Diversity, Taxonomy and Ecology of Ascomycota, 2nd Edition

edited by Renan do Nascimento Barbosa and Jadson Diogo Pereira Bezerra

submission deadline 31 Aug 2025 | Viewed by 82 | Submission Open

Keywords: ascomycota; endophytic fungi; insect– fungal associations; fungal taxonomy; fungal ecology; polyphasic taxonomy; speleomycology

Fungi in Sustainable Applications and the Circular Economy: A Themed Issue Dedicated to Academician Yu Li

edited by Changtian Li

submission deadline 10 Sep 2025 | 2 articles | Viewed by 1100 | Submission Open

Keywords: fungal resources; breeding; biofuels; biomass; spent mushroom substrate; fungal materials; environmental analysis; fungal protein; edible mushrooms

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Integrated Management of Plant Fungal Diseases

edited by

Mahfuz Rahman

and

Tofazzal Islam

submission deadline 30 Sep 2025 | 4 articles | Viewed by 6973 | Submission Open

Keywords: fungi; plant disease; integrated management; biology; epidemiology; biological control; chemical control; host resistance; fungicide resistance

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Gut Mycobiome, 2nd Edition

edited by Mysore V Tejesvi

submission deadline 30 Sep 2025 | 3 articles | Viewed by 4385 | Submission Open

Keywords: mycobiome; Candida; host– fungus interactions; fungal– bacterial interations; mycobiome and gut brain axis; mycobiome and fungal metabolites

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Morphology, Phylogeny and Pathogenicity of Fusarium

edited by

Maria Laura Ramirez

and Eugenia Cendoya

submission deadline 30 Sep 2025 | 3 articles | Viewed by 4316 | Submission Open

Keywords: Fusarium; pathogens; mycotoxins; taxonomy; virulence

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Recent Advances in Yeast Lipid Production

edited by Zongbao Zhao

submission deadline 30 Sep 2025 | 2 articles | Viewed by 2955 | Submission Open

Keywords: biodiesel; functional lipids; lipid production process; lipidomics; metabolic engineering; oleochemicals; systems biology; sustainable aviation fuels; yeast lipids

(This special issue belongs to the Section Fungal Cell Biology, Metabolism and Physiology)

Alternative Therapeutic Approaches of Candida Infections, 4th Edition

edited by

Renátó Kovács

submission deadline 30 Sep 2025 | 1 articles | Viewed by 437 | Submission Open

Keywords: Candida; in vitro and in vivo susceptibility; therapy; biofilms; combination; antifungals; quorum-sensing; natural products; antifungal peptides and proteins; photodynamic therapy; resistance; synergy; Candida auris; echinocandin resistance

Prevention and Treatment of Cryptococcal Meningitis

edited by Thomas S. Harrison

submission deadline 30 Sep 2025 | Viewed by 299 | Submission Open

Keywords: cryptococcal meningitis; cryptococcal antigen; screening antifungals; amphotericin; fluconazole; flucytosine; liposomal amphotericin; HIV-associated; non-HIV-associated intracranial pressure; immune reconstitution

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Fungal Pigments, 4th Edition

edited by

Laurent Dufossé

submission deadline 30 Sep 2025 | Viewed by 277 | Submission Open

Keywords: filamentous fungi; pigment; colorant; carotenoid; polyketide; azaphilone; anthraquinone; naphthoquinone; screening; biodiversity

(This special issue belongs to the Section Fungal Cell Biology, Metabolism and Physiology)

New Perspectives on Insect-Associated Fungi

edited by Renan do Nascimento Barbosa and Ana Carla da Silva Santos

submission deadline 30 Sep 2025 | Viewed by 109 | Submission Open

Keywords: biological control; entomopathogenic fungi; insect– fungus associations; mutualistic fungi of insects

Fungal Immunology and Vaccinology, 2nd Edition

edited by Stuart M. Levitz

submission deadline 30 Sep 2025 | Viewed by 80 | Submission Open

Keywords: fungal immunology; fungal vaccines; host defenses against fungi; cryptococcosis; aspergillosis; candidiasis; mucormycosis; dimorphic fungi

Focus on Histoplasmosis: Tackling a Neglected Disease

edited by Claire E. Scantlebury

submission deadline 30 Sep 2025 | Viewed by 70 | Submission Open

Keywords: one health; histoplasmosis; coordinated disease control; neglected disease; global health challenges

Stress Tolerance in Yeast Biotechnology

edited by

Isabel Sá-Correia

and

Lucília Domingues

submission deadline 30 Sep 2025 | Viewed by 29 | Submission Open

Keywords: response and adaptation to stress; stress tolerance; gene and genomic expression under stress; stress-induced signaling pathways; yeast diversity; saccharomyces and non-Saccharomyces yeasts; tolerance improvement; metabolic engineering; synthetic biology; adaptive laboratory evolution; strain robustness; multi-tolerance to stress; fermentation efficiency; bioprocess optimization; bioprocesses in the food and beverage industry; valorization of agro-industrial residues; bioconversion of lignocellulosic biomass; yeast biorefineries; circular bioeconomy; industrial biotechnology

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Advances in Research on Entomopathogenic Fungi

edited by Isabele da Costa Angelo

submission deadline 30 Sep 2025 | Viewed by 14 | Submission Open

Keywords: entomopathogenic fungi; biological control; molecular taxonomy; fungal virulence; arthropod immunity; biotechnological tools; pathogenicity genes; host– pathogen interaction; fungal metabolites; pest management

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Ascomycota: Diversity, Taxonomy and Phylogeny, 3rd Edition

edited by

Jian-Kui Liu

submission deadline 1 Oct 2025 | 1 articles | Viewed by 773 | Submission Open

Keywords: asexual/sexual morph; classification; fungal ecology; molecular data; morphology; novel taxa; phylogeny

(This special issue belongs to the Section Fungal Evolution, Biodiversity and Systematics)

Plant Pathogenic Sclerotiniaceae

edited by

George Karaoglanidis

and

Stefanos Testempasis

submission deadline 10 Oct 2025 | Viewed by 36 | Submission Open

Keywords: Botrytis spp.; Sclerotinia spp.; Monilinia spp.; plant pathogenic fungi; host– pathogen interactions; disease epidemiology; fungal genetics and genomics; “ omic” technologies; disease detection and diagnosis; sustainable disease management

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Pathogenic Fungi: Morphogenesis, Pathogenicity and Biosynthesis of Secondary Metabolites—Second Edition

edited by

Zhenhong Zhuang

submission deadline 20 Oct 2025 | 2 articles | Viewed by 1540 | Submission Open

Keywords: pathogenic fungi; morphogenesis; pathogenicity; secondary metabolites

(This special issue belongs to the Section Fungal Cell Biology, Metabolism and Physiology)

Azole Resistance in Aspergillus spp., 2nd Edition

edited by

Teresa Peláez-García de la Rasilla

submission deadline 30 Oct 2025 | 1 articles | Viewed by 3372 | Submission Open

Keywords: Aspergillus spp. azole resistance molecular mechanisms; clinical azole resistance; environmental azole resistance; evolution of azole resistance; detection of azole resistance; azole tolerance/persistence

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Mycological Research in Spain

edited by

Ana Alastruey-Izquierdo

submission deadline 31 Oct 2025 | 2 articles | Viewed by 1399 | Submission Open

Keywords: fungal pathogenesis fungal disease control; antifungal susceptibility testing; fungal biodiversity and systematics; fungal ecology molecular and genetic studies of fungi; fungal biotechnology and industrial applications

Multidrug-Resistant Fungi, 2nd Edition

edited by

Antônio Ferreira-Pereira

submission deadline 31 Oct 2025 | 1 articles | Viewed by 1079 | Submission Open

Keywords: antimicrobial resistance; efflux pumps; multidrug resistance; antifungal

Biological Control of Fungal Diseases, 2nd Edition

edited by

Alessandro Vitale

submission deadline 31 Oct 2025 | 2 articles | Viewed by 809 | Submission Open

Keywords: post-harvest diseases; biological control; fungal diseases; diseases of tropical fruits

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Candidiasis: Changes and Challenges in Its Epidemiology, Pathogenesis, Diagnosis, Treatment and Prevention

edited by Guillermo Quindos

submission deadline 31 Oct 2025 | Viewed by 108 | Submission Open

Keywords: medical mycology; mycoses; candida; candidiasis; mycobiome; biofilms; diagnosis; antifungal agents

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

New Perspectives on Fungal Immunology

edited by

Dongmei Li

submission deadline 31 Oct 2025 | Viewed by 101 | Submission Open

Keywords: antifungal immunity; host– fungus interaction; biological; microbiome-driven immune response; diagnostic invention; antifungal vaccine

Fungal Biotechnology Application in Pesticide Bioremediation

edited by Carina Elizabeth Magnoli and Carla Lorena Barberis

submission deadline 31 Oct 2025 | Viewed by 40 | Submission Open

Keywords: pesticides; fungi; bioremediation; ecosystems; bioinputs; degradation; biotechnology

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Host–Fungal Interplay: Virulence, Immunity, Antifungal Resistance, and Therapeutic Strategies

edited by Claudia Elena Sotomayor,

Juan Pablo Caeiro

and Fernando Oscar Riera

submission deadline 10 Nov 2025 | Viewed by 79 | Submission Open

Keywords: fungal pathogenesis; host immune response; antifungal resistance; therapeutic approaches; emerging fungal pathogens

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Molecular Biology of Mushroom

edited by Young-Jin Park

submission deadline 15 Nov 2025 | 3 articles | Viewed by 2486 | Submission Open

Keywords: molecular biology; genetics; genomics; transcriptomics; medicinal uses; metabolism and metabolites; evolution; fruiting body development; genome editing; phylogeny

(This special issue belongs to the Section Fungal Genomics, Genetics and Molecular Biology)

Advances in Antifungal Drugs, 2nd Edition

edited by Antonella Lupetti and Iacopo Franconi

submission deadline 20 Nov 2025 | 2 articles | Viewed by 2896 | Submission Open

Keywords: new antifungal drugs; antifungal resistance; antifungal therapy; Candida spp. infections; Aspergillus spp. infections; fungal infections; antifungal compounds

(This special issue belongs to the Section Fungal Pathogenesis and Disease Control)

Filamentous Fungi as Excellent Industrial Strains: Development and Applications, 2nd Edition

edited by

Sandra Garrigues

and

Mónica Gandía

submission deadline 30 Nov 2025 | 1 articles | Viewed by 1875 | Submission Open

Keywords: fungal strain improvement; classical strain development; fungal biotechnology; fungal synthetic biology; fungal biofactories; industrial applications

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Medical Mycology: Antifungal Resistance, Diagnosis, and Infection Control

edited by

Reginaldo Gonçalves de Lima-Neto

and

Patrice Le Pape

submission deadline 30 Nov 2025 | Viewed by 146 | Submission Open

Keywords: medical mycology; fungal diseases; antifungal resistance; diagnosis; infection control

Emerging Investigators in Marine Fungi

edited by

Wei Li

Gaetan Burgaud

and

Senouwa Segla Koffi Dossou

submission deadline 30 Nov 2025 | Viewed by 106 | Submission Open

Keywords: marine mycology; fungal biodiversity and taxonomy; fungal biogeography; ecosystem functions; temporal dynamic; fungal phylogeny; fungal-microbe interactions; biotechnological potential; multi-omics

New Insights into Arbuscular Mycorrhizal Fungi

edited by

Bruno Tomio Goto

and

Fábio Sérgio Barbosa Da Silva

submission deadline 30 Nov 2025 | Viewed by 81 | Submission Open

Keywords: taxonomy; systematic; ecology; biodiversity; Glomeromycota; phytochemistry; biotechnology

(This special issue belongs to the Section Fungi in Agriculture and Biotechnology)

Fungal Diversity in Various Environments, 4th Edition

edited by

Seung-Yoon Oh

submission deadline 30 Nov 2025 | Viewed by 71 | Submission Open

Keywords: fungal diversity; fungal taxonomy; phylogenetics evolution bioinformatics

Metabolism and Ecological Role of Fungi in Extreme Environments

edited by

Changhong Liu

submission deadline 30 Nov 2025 | Viewed by 42 | Submission Open

Keywords: fungi; extreme environments; metabolism; adaptation; ecological role; biogeochemical cycles; survival strategies; fungal diversity

(This special issue belongs to the Section Environmental and Ecological Interactions of Fungi)

The Gift of Marine Fungi: Abundant Secondary Metabolites, 2nd Edition

edited by

Ling Liu

and

Mancheng Tang

submission deadline 30 Nov 2025 | Viewed by 29 | Submission Open

Keywords: marine fungi; bioactivity; structure elucidation; natural products; new strategies; biosynthetic gene clusters

Synthetic Biology and Metabolic Engineering of Yeast

edited by

Mingfeng Cao

submission deadline 30 Nov 2025 | Viewed by 23 | Submission Open

Keywords: yeast; synthetic biology; metabolic engineering; cell factories; genome editing; systems biology

(This special issue belongs to the Section Fungal Genomics, Genetics and Molecular Biology)

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