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Data, Volume 4, Issue 2

2019 June - 43 articles

Cover Story: The daily production of clinical and biomedical research data can help enable data-driven healthcare through novel biomedical discoveries, improved diagnostics processes, epidemiology, and education. Finding and gaining access to these data and relevant metadata to achieve these goals, however, remains a challenge. These data sources are often geographically distributed, have diverse characteristics, and are controlled by a host of logistical and legal factors that require appropriate governance and access control guarantees. The primary desirable dataset properties are, thus, that the data should be findable, accessible, interoperable, and reusable (FAIR). In the proposed research work, we introduce and describe an abstract framework Data integration and indexing System (DiiS) that models these ideal goals and could be a step toward supporting data driven research. View this paper
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Articles (43)

  • Data Descriptor
  • Open Access
30 Citations
9,526 Views
12 Pages

The Ionic Liquid Property Explorer: An Extensive Library of Task-Specific Solvents

  • Vishwesh Venkatraman,
  • Sigvart Evjen and
  • Kallidanthiyil Chellappan Lethesh

21 June 2019

Ionic liquids have a broad spectrum of applications ranging from gas separation to sensors and pharmaceuticals. Rational selection of the constituent ions is key to achieving tailor-made materials with functional properties. To facilitate the discove...

  • Data Descriptor
  • Open Access
4 Citations
7,611 Views
13 Pages

21 June 2019

Collatz conjecture is also known as 3X + 1 conjecture. For verifying the conjecture, we designed an algorithm that can output reduced dynamics (occurred 3 × x + 1 or x/2 computations from a starting integer to the first integer smaller than the...

  • Data Descriptor
  • Open Access
4,462 Views
8 Pages

Dataset on Substrate-Borne Vibrations of Constrictotermes cyphergaster (Blattodea: Isoptera) Termites

  • Lívia Fonseca Nunes,
  • Paulo Fellipe Cristaldo,
  • Pedro Sérgio Silva,
  • Leonardo Bonato Felix,
  • Danilo Miranda Ribeiro and
  • Og DeSouza

19 June 2019

Here we present data on distinct stimuli as elicitors of substrate-borne vibrations performed by groups of termites belonging to the species Constrictotermes cyphergaster (Blattodea: Isoptera: Termitidae: Nasutitermitinae). The study consisted of ass...

  • Article
  • Open Access
8 Citations
7,564 Views
25 Pages

A Topology Based Spatio-Temporal Map Algebra for Big Data Analysis

  • Sören Gebbert,
  • Thomas Leppelt and
  • Edzer Pebesma

18 June 2019

Continental and global datasets based on earth observations or computational models challenge the existing map algebra approaches. The available datasets differ in their spatio-temporal extents and their spatio-temporal granularity, which makes it di...

  • Editorial
  • Open Access
5 Citations
3,442 Views
4 Pages

Special Issue on the Curative Power of Medical Data

  • Daniela Gîfu,
  • Diana Trandabăț,
  • Kevin Cohen and
  • Jingbo Xia

14 June 2019

With the massive amounts of medical data made available online, language technologies have proven to be indispensable in processing biomedical and molecular biology literature, health data or patient records. With huge amount of reports, evaluating t...

  • Article
  • Open Access
7 Citations
7,273 Views
11 Pages

CaosDB—Research Data Management for Complex, Changing, and Automated Research Workflows

  • Timm Fitschen,
  • Alexander Schlemmer,
  • Daniel Hornung,
  • Henrik tom Wörden,
  • Ulrich Parlitz and
  • Stefan Luther

10 June 2019

We present CaosDB, a Research Data Management System (RDMS) designed to ensure seamless integration of inhomogeneous data sources and repositories of legacy data in a FAIR way. Its primary purpose is the management of data from biomedical sciences, b...

  • Article
  • Open Access
15 Citations
4,949 Views
12 Pages

Pedagogical Demonstration of Twitter Data Analysis: A Case Study of World AIDS Day, 2014

  • Isaac Chun-Hai Fung,
  • Jingjing Yin,
  • Keisha D. Pressley,
  • Carmen H. Duke,
  • Chen Mo,
  • Hai Liang,
  • King-Wa Fu,
  • Zion Tsz Ho Tse and
  • Su-I Hou

10 June 2019

As a pedagogical demonstration of Twitter data analysis, a case study of HIV/AIDS-related tweets around World AIDS Day, 2014, was presented. This study examined if Twitter users from countries with various income levels responded differently to World...

  • Data Descriptor
  • Open Access
6 Citations
5,495 Views
10 Pages

Homisland-IO: Homogeneous Land Use/Land Cover over the Small Islands of the Indian Ocean

  • Christophe Révillion,
  • Artadji Attoumane and
  • Vincent Herbreteau

8 June 2019

Many small islands are located in the southwestern Indian Ocean. These islands have their own environmental specificities and very fragmented landscapes. Generic land use products developed from low and medium resolution satellite images are not suit...

  • Article
  • Open Access
11 Citations
5,669 Views
12 Pages

Graph Theoretic and Pearson Correlation-Based Discovery of Network Biomarkers for Cancer

  • Raihanul Bari Tanvir,
  • Tasmia Aqila,
  • Mona Maharjan,
  • Abdullah Al Mamun and
  • Ananda Mohan Mondal

5 June 2019

Two graph theoretic concepts—clique and bipartite graphs—are explored to identify the network biomarkers for cancer at the gene network level. The rationale is that a group of genes work together by forming a cluster or a clique-like stru...

  • Data Descriptor
  • Open Access
2 Citations
4,697 Views
9 Pages

Survey Data for Measuring Musical Creativity and the Impact of Information

  • Petros Kostagiolas,
  • Charilaos Lavranos and
  • Panagiotis Manolitzas

1 June 2019

This paper presents data about the analysis of Webster’s model of creative thinking in music products, and the impact of information on musical creativity. For this purpose, a specially designed closed-ended structured questionnaire was develop...

  • Article
  • Open Access
8 Citations
7,977 Views
14 Pages

A New Crop Spectral Signatures Database Interactive Tool (CSSIT)

  • Mohamad M. Awad,
  • Bassem Alawar and
  • Rana Jbeily

24 May 2019

In many countries, commodities provided by the agriculture sector play an important role in the economy. Securing food is one aspect of this role, which can be achieved when the decision makers are supported by tools. The need for cheap, fast, and ac...

  • Data Descriptor
  • Open Access
9 Citations
4,547 Views
5 Pages

24 May 2019

Assessing the state of fish stocks requires the determination of descriptors. They correspond to the absolute and relative (to the carrying capacity of the habitat) fish biomasses in the ecosystem, and the absolute and relative (to the intrinsic grow...

  • Article
  • Open Access
3,287 Views
7 Pages

24 May 2019

Speckle tracking echography is used to measure myocardial strain patterns in order to assess the state of myocardial tissue. Because electro-mechanical coupling in myocardial tissue is complex and nonlinear, and because of the measurement errors the...

  • Article
  • Open Access
14 Citations
4,409 Views
13 Pages

23 May 2019

Feature subset selection is a process to choose a set of relevant features from a high dimensionality dataset to improve the performance of classifiers. The meaningful words extracted from data forms a set of features for sentiment analysis. Many evo...

  • Article
  • Open Access
65 Citations
13,471 Views
28 Pages

A Novel Hybrid Model for Stock Price Forecasting Based on Metaheuristics and Support Vector Machine

  • Mojtaba Sedighi,
  • Hossein Jahangirnia,
  • Mohsen Gharakhani and
  • Saeed Farahani Fard

22 May 2019

This paper intends to present a new model for the accurate forecast of the stock’s future price. Stock price forecasting is one of the most complicated issues in view of the high fluctuation of the stock exchange and also it is a key issue for...

  • Data Descriptor
  • Open Access
73 Citations
6,672 Views
17 Pages

21 May 2019

Buildings and homes in Canada will be exposed to unprecedented climatic conditions in the future as a consequence of global climate change. To improve the climate resiliency of existing and new buildings, it is important to evaluate their performance...

  • Data Descriptor
  • Open Access
18 Citations
6,787 Views
15 Pages

21 May 2019

Coastal dunes offer numerous functions to society, such as sea defense and recreation, and host unique habitats with high biodiversity. Research on coastal dune dynamics has traditionally focused on the erosional impact of short-duration (hours to da...

  • Article
  • Open Access
4 Citations
5,729 Views
18 Pages

A Study on Visual Representations for Active Plant Wall Data Analysis

  • Kahin Akram Hassan,
  • Yu Liu,
  • Lonni Besançon,
  • Jimmy Johansson and
  • Niklas Rönnberg

21 May 2019

The indoor climate is closely related to human health, well-being, and comfort. Thus, an understanding of the indoor climate is vital. One way to improve the indoor climates is to place an aesthetically pleasing active plant wall in the environment....

  • Article
  • Open Access
3 Citations
4,311 Views
19 Pages

Isolation, Characterization, and Agent-Based Modeling of Mesenchymal Stem Cells in a Bio-construct for Myocardial Regeneration Scaffold Design

  • Diana Victoria Ramírez López,
  • María Isabel Melo Escobar,
  • Carlos A. Peña-Reyes,
  • Álvaro J. Rojas Arciniegas and
  • Paola Andrea Neuta Arciniegas

19 May 2019

Regenerative medicine involves methods to control and modify normal tissue repair processes. Polymer and cell constructs are under research to create tissue that replaces the affected area in cardiac tissue after myocardial infarction (MI). The aim o...

  • Data Descriptor
  • Open Access
3 Citations
4,442 Views
7 Pages

Stem-Maps of Forest Restoration Cuttings in Pinus ponderosa-Dominated Forests in the Interior West, USA

  • Justin P. Ziegler,
  • Chad M. Hoffman,
  • Mike A. Battaglia and
  • William Mell

14 May 2019

Stem-maps, maps of tree locations with optional associated measurements, are increasingly being used for ecological study in forest and plant sciences. Analyses of stem-map data have led to greater scientific understanding and improved forest managem...

  • Data Descriptor
  • Open Access
20 Citations
11,149 Views
37 Pages

Exploration of Youth’s Digital Competencies: A Dataset in the Educational Context of Vietnam

  • Anh-Vinh Le,
  • Duc-Lan Do,
  • Duc-Quang Pham,
  • Phuong-Hanh Hoang,
  • Thu-Huong Duong,
  • Hoai-Nam Nguyen,
  • Thu-Trang Vuong,
  • Hong-Kong T. Nguyen,
  • Manh-Toan Ho and
  • Quan-Hoang Vuong
  • + 1 author

14 May 2019

The recent surge of the Fourth Industrial Revolution has set forth demands for a new generation of the labor force with a comprehensive set of skills to meet the standards of the global market. Despite widespread concerns about educational reforms an...

  • Data Descriptor
  • Open Access
8 Citations
23,045 Views
4 Pages

11 May 2019

As queues in supermarkets seem to be inevitable, researchers try to find solutions that can improve and speed up the checkout process. This, however, requires access to real-world data for developing and validating models. With this objective in mind...

  • Article
  • Open Access
33 Citations
17,729 Views
18 Pages

Predictive Models of Student College Commitment Decisions Using Machine Learning

  • Kanadpriya Basu,
  • Treena Basu,
  • Ron Buckmire and
  • Nishu Lal

8 May 2019

Every year, academic institutions invest considerable effort and substantial resources to influence, predict and understand the decision-making choices of applicants who have been offered admission. In this study, we applied several supervised machin...

  • Data Descriptor
  • Open Access
8 Citations
6,077 Views
11 Pages

Lateral Root and Nodule Transcriptomes of Soybean

  • Sajag Adhikari,
  • Suresh Damodaran and
  • Senthil Subramanian

8 May 2019

Symbiotic legume nodules and lateral roots arise away from the root meristem via dedifferentiation events. While these organs share some morphological and developmental similarities, whether legume nodules are modified lateral roots is an open questi...

  • Data Descriptor
  • Open Access
15 Citations
10,207 Views
20 Pages

8 May 2019

Agro-climatic data by county (ACDC) is designed to provide the major agro-climatic variables from publicly available spatial data sources to diverse end-users. ACDC provides USDA NASS annual (1981–2015) crop yields for corn, soybeans, upland co...

  • Data Descriptor
  • Open Access
4 Citations
3,931 Views
5 Pages

Transcriptome Dataset of Leaf Tissue in Agave H11648

  • Xing Huang,
  • Li Xie,
  • Thomas Gbokie,
  • Jingen Xi and
  • Kexian Yi

6 May 2019

Sisal is widely cultivated in tropical areas for fiber production. The main sisal cultivar, Agave H11648 ((A. amaniensis × A. angustifolia) × A. amaniensis) has a relatively scarce molecular basis and no genomic information. Next-generati...

  • Data Descriptor
  • Open Access
34 Citations
9,066 Views
17 Pages

BrainRun: A Behavioral Biometrics Dataset towards Continuous Implicit Authentication

  • Michail D. Papamichail,
  • Kyriakos C. Chatzidimitriou,
  • Thomas Karanikiotis,
  • Napoleon-Christos I. Oikonomou,
  • Andreas L. Symeonidis and
  • Sashi K. Saripalle

1 May 2019

The widespread use of smartphones has dictated a new paradigm, where mobile applications are the primary channel for dealing with day-to-day tasks. This paradigm is full of sensitive information, making security of utmost importance. To that end, and...

  • Data Descriptor
  • Open Access
18 Citations
6,441 Views
10 Pages

1 May 2019

This paper presents a dataset of seed volumes calculated from length, width, and when available, thickness, abstracted from printed literature—essentially scientific journals and books including Floras and illustrated manuals, from online inven...

  • Article
  • Open Access
11 Citations
7,217 Views
17 Pages

Evaluation of Users’ Knowledge and Concerns of Biometric Passport Systems

  • Taban Habibu,
  • Edith Talina Luhanga and
  • Anael Elikana Sam

29 April 2019

The increase in terrorism and identity fraud has forced governments worldwide to make a combined effort to enhance the security of national borders. Biometric passports are the emergent identity travel document deployed in guaranteeing the safekeepin...

  • Data Descriptor
  • Open Access
13 Citations
12,176 Views
14 Pages

Health Care, Medical Insurance, and Economic Destitution: A Dataset of 1042 Stories

  • Manh-Toan Ho,
  • Viet-Phuong La,
  • Minh-Hoang Nguyen,
  • Thu-Trang Vuong,
  • Kien-Cuong P. Nghiem,
  • Trung Tran,
  • Hong-Kong T. Nguyen and
  • Quan-Hoang Vuong

27 April 2019

The dataset contains 1042 records obtained from inpatients at hospitals in the northern region of Vietnam. The survey process lasted 20 months from August 2014 to March 2016, and yielded a comprehensive set of records of inpatients’ financial s...

  • Data Descriptor
  • Open Access
24 Citations
8,128 Views
10 Pages

Fuel Properties of Torrefied Biomass from Pruning of Oxytree

  • Kacper Świechowski,
  • Marek Liszewski,
  • Przemysław Bąbelewski,
  • Jacek A. Koziel and
  • Andrzej Białowiec

25 April 2019

The very fast growing Oxytree (Paulownia Clon in Vitro 112) is marketed as a promising new energy crop. The tree has characteristically large leaves, thrives in warmer climates, and requires initial pruning for enhanced biomass production in later ye...

  • Article
  • Open Access
2 Citations
3,912 Views
11 Pages

25 April 2019

This paper shows the results of the refined locations for underground Peaceful Nuclear Explosions (PNEs). Peaceful nuclear explosions (PNEs) were made for industrial applications in the Soviet Union. This study is based on a comparison of PNEs’...

  • Article
  • Open Access
11 Citations
6,647 Views
18 Pages

DiiS: A Biomedical Data Access Framework for Aiding Data Driven Research Supporting FAIR Principles

  • Priya Deshpande,
  • Alexander Rasin,
  • Jacob Furst,
  • Daniela Raicu and
  • Sameer Antani

20 April 2019

Vast amounts of clinical and biomedical research data are produced daily. These data can help enable data driven healthcare through novel biomedical discoveries, improved diagnostics processes, epidemiology, and education. However, finding, and gaini...

  • Data Descriptor
  • Open Access
15 Citations
4,014 Views
6 Pages

Waste to Carbon Energy Demand Model and Data Based on the TGA and DSC Analysis of Individual MSW Components

  • Paweł Stępień,
  • Małgorzata Serowik,
  • Jacek A. Koziel and
  • Andrzej Białowiec

19 April 2019

The pioneering developed simplified mathematical model can be used to determine the energy consumption of the torrefaction process. Specifically, the energy balance model was developed for torrefaction of municipal solid waste (MSW; a combustible fra...

  • Article
  • Open Access
8 Citations
3,775 Views
14 Pages

Data Engineering for Affective Understanding Systems

  • Nuha El-Khalili,
  • May Alnashashibi,
  • Wael Hadi,
  • Abed Alkarim Banna and
  • Ghassan Issa

18 April 2019

Affective understanding is an area of affective computing which is concerned with advancing the ability of a computer to understand the affective state of its user. This area continues to receive attention in order to improve the human-computer inter...

  • Data Descriptor
  • Open Access
5 Citations
8,305 Views
7 Pages

10 April 2019

In the context of a public mental health study conducted in Casablanca, the economic capital of Morocco, we encountered a serious challenge regarding the availability of consistent and accurate administrative division data. Hence, using the Google Ma...

  • Data Descriptor
  • Open Access
6 Citations
8,047 Views
16 Pages

4 April 2019

Given downward trends in fertility and mortality, population dynamics –and thus the

estimation of spatially-explicit population dynamics and gridded population and derivative

products– are increasingly sensitive to mobility processes and th...

  • Article
  • Open Access
1 Citations
3,927 Views
20 Pages

2 April 2019

With the influence of Big Data culture on qualitative data collection, acquisition, and processing, it is becoming increasingly important that social scientists understand the complexity underlying data collection and the resulting models and analyse...

  • Data Descriptor
  • Open Access
8 Citations
11,957 Views
12 Pages

A Dataset of Vietnamese Junior High School Students’ Reading Preferences and Habits

  • Quan-Hoang Vuong,
  • Anh-Vinh Le,
  • Viet-Phuong La,
  • Thu-Trang Vuong,
  • Thu-Hang Do,
  • Ha-My Vuong,
  • Duc-Lan Do,
  • Phuong-Hanh Hoang,
  • Thi-Hanh Vu and
  • Manh-Toan Ho
  • + 1 author

2 April 2019

Books are the invaluable, colossal storage of mankind’s immense scholarship and are still commonly perceived as a more reliable source of knowledge even in this age of digitized information. Extensive reading is often promoted as being vital to...

  • Article
  • Open Access
2 Citations
4,573 Views
15 Pages

Planetary Defense Mitigation Gateway: A One-Stop Gateway for Pertinent PD-Related Contents

  • Ishan Shams,
  • Yun Li,
  • Jingchao Yang,
  • Manzhu Yu,
  • Chaowei Yang,
  • Myra Bambacus,
  • Ruthan Lewis,
  • Joseph A. Nuth,
  • Luke Oman and
  • Megan B. Syal
  • + 4 authors

28 March 2019

Planetary Defense (PD) has become a critical effort of protecting our home planet by discovering potentially hazardous objects (PHOs), simulating the potential impact, and mitigating the threats. Due to the lack of structured architecture and framewo...

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Data - ISSN 2306-5729