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24 Results Found

  • Review
  • Open Access
7 Citations
4,527 Views
17 Pages

22 January 2024

Double-stranded RNA (dsRNA) molecules are mediators of RNA interference (RNAi) in eukaryotic cells. RNAi is a conserved mechanism of post-transcriptional silencing of genes cognate to the sequences of the applied dsRNA. RNAi-based therapeutics for th...

  • Review
  • Open Access
46 Citations
17,198 Views
30 Pages

Human Papillomavirus: Current and Future RNAi Therapeutic Strategies for Cervical Cancer

  • Hun Soon Jung,
  • Nirmal Rajasekaran,
  • Woong Ju and
  • Young Kee Shin

21 May 2015

Human papillomaviruses (HPVs) are small DNA viruses; some oncogenic ones can cause different types of cancer, in particular cervical cancer. HPV-associated carcinogenesis provides a classical model system for RNA interference (RNAi) based cancer the...

  • Article
  • Open Access
26 Citations
10,816 Views
18 Pages

Human Papillomavirus E6/E7-Specific siRNA Potentiates the Effect of Radiotherapy for Cervical Cancer in Vitro and in Vivo

  • Hun Soon Jung,
  • Nirmal Rajasekaran,
  • Sang Yong Song,
  • Young Deug Kim,
  • Sungyoul Hong,
  • Hyuck Jae Choi,
  • Young Seok Kim,
  • Jong-Sun Choi,
  • Yoon-La Choi and
  • Young Kee Shin

29 May 2015

The functional inactivation of TP53 and Rb tumor suppressor proteins by the HPV-derived E6 and E7 oncoproteins is likely an important step in cervical carcinogenesis. We have previously shown siRNA technology to selectively silence both E6/E7 oncoge...

  • Article
  • Open Access
15 Citations
4,617 Views
10 Pages

Herpes Simplex Virus Type 1 Clinical Isolates Respond to UL29-Targeted siRNA Swarm Treatment Independent of Their Acyclovir Sensitivity

  • Kiira Kalke,
  • Jenni Lehtinen,
  • Jelena Gnjatovic,
  • Liisa M. Lund,
  • Marie C. Nyman,
  • Henrik Paavilainen,
  • Julius Orpana,
  • Tuomas Lasanen,
  • Fanny Frejborg and
  • Veijo Hukkanen
  • + 3 authors

13 December 2020

Acyclovir is the drug of choice for the treatment of herpes simplex virus (HSV) infections. Acyclovir-resistant HSV strains may emerge, especially during long-term drug use, and subsequently cause difficult-to-treat exacerbations. Previously, we set...

  • Article
  • Open Access
6 Citations
3,792 Views
14 Pages

Hydrocarbon-Stapled Peptide Based-Nanoparticles for siRNA Delivery

  • Matthieu Simon,
  • Nabila Laroui,
  • Marianne Heyraud,
  • Guillaume Laconde,
  • Lamiaa M. A. Ali,
  • Kevin Bourbiaux,
  • Gilles Subra,
  • Lubomir L. Vezenkov,
  • Baptiste Legrand and
  • Nadir Bettache
  • + 1 author

25 November 2020

Small interfering RNAs (siRNAs) are promising molecules for developing new therapies based on gene silencing; however, their delivery into cells remains an issue. In this study, we took advantage of stapled peptide technology that has emerged as a va...

  • Article
  • Open Access
3 Citations
2,755 Views
14 Pages

Analysis of Virus-Derived siRNAs in Strawberry Plants Co-Infected with Multiple Viruses and Their Genotypes

  • Igor Koloniuk,
  • Alena Matyášová,
  • Sára Brázdová,
  • Jana Veselá,
  • Jaroslava Přibylová,
  • Eva Várallyay and
  • Jana Fránová

6 July 2023

Plants can be infected with multiple viruses. High-throughput sequencing tools have enabled numerous discoveries of multi-strain infections, when more than one viral strain or divergent genomic variant infects a single plant. Here, we investigated sm...

  • Article
  • Open Access
4 Citations
2,813 Views
20 Pages

5 September 2024

Purpose: Glaucoma, one of the leading causes of irreversible blindness, is a common progressive optic neuropathy characterised by visual field defects and structural changes to the optic nerve head (ONH). There is extracellular matrix (ECM) accumulat...

  • Article
  • Open Access
16 Citations
4,141 Views
11 Pages

TASPERT: Target-Specific Reverse Transcript Pools to Improve HTS Plant Virus Diagnostics

  • Andres S. Espindola,
  • Daniela Sempertegui-Bayas,
  • Danny F. Bravo-Padilla,
  • Viviana Freire-Zapata,
  • Francisco Ochoa-Corona and
  • Kitty F. Cardwell

24 June 2021

High-throughput sequencing (HTS) is becoming the new norm of diagnostics in plant quarantine settings. HTS can be used to detect, in theory, all pathogens present in any given sample. The technique’s success depends on various factors, including meth...

  • Review
  • Open Access
8 Citations
6,336 Views
21 Pages

Muscle Regeneration and RNA: New Perspectives for Ancient Molecules

  • Giulia Buonaiuto,
  • Fabio Desideri,
  • Valeria Taliani and
  • Monica Ballarino

23 September 2021

The ability of the ribonucleic acid (RNA) to self-replicate, combined with a unique cocktail of chemical properties, suggested the existence of an RNA world at the origin of life. Nowadays, this hypothesis is supported by innovative high-throughput a...

  • Article
  • Open Access
4 Citations
3,169 Views
13 Pages

Understanding the Mechanism of Diabetes Mellitus in a LRBA-Deficient Patient

  • Iman Hawari,
  • Johan Ericsson,
  • Basirudeen Syed Ahamed Kabeer,
  • Damien Chaussabel,
  • Asma Alsulaiti,
  • Sanaa A. Sharari,
  • Cristina Maccalli,
  • Faiyaz Ahmad Khan and
  • Khalid Hussain

18 April 2022

The scope of this study is to show that DM in a LRBA-deficient patient with a stop codon mutation (c.3999 G > A) was not mediated through autoimmunity. We have evaluated the ability of the proband’s T cells to be activated by assessing their...

  • Article
  • Open Access
31 Citations
4,775 Views
20 Pages

Characterization of a Novel Mitovirus of the Sand Fly Lutzomyia longipalpis Using Genomic and Virus–Host Interaction Signatures

  • Paula Fonseca,
  • Flavia Ferreira,
  • Felipe da Silva,
  • Liliane Santana Oliveira,
  • João Trindade Marques,
  • Aristóteles Goes-Neto,
  • Eric Aguiar and
  • Arthur Gruber

23 December 2020

Hematophagous insects act as the major reservoirs of infectious agents due to their intimate contact with a large variety of vertebrate hosts. Lutzomyia longipalpis is the main vector of Leishmania chagasi in the New World, but its role as a host of...

  • Article
  • Open Access
20 Citations
5,532 Views
19 Pages

The Ubiquitin Gene Expression Pattern and Sensitivity to UBB and UBC Knockdown Differentiate Primary 23132/87 and Metastatic MKN45 Gastric Cancer Cells

  • Emanuele Salvatore Scarpa,
  • Filippo Tasini,
  • Rita Crinelli,
  • Chiara Ceccarini,
  • Mauro Magnani and
  • Marzia Bianchi

Gastric cancer (GC) is one of the most common and lethal cancers. Alterations in the ubiquitin (Ub) system play key roles in the carcinogenetic process and in metastasis development. Overexpression of transcription factors YY1, HSF1 and SP1, known to...

  • Article
  • Open Access
16 Citations
7,758 Views
15 Pages

Activation of RAF1 (c-RAF) by the Marine Alkaloid Lasonolide A Induces Rapid Premature Chromosome Condensation

  • Rozenn Jossé,
  • Yong-Wei Zhang,
  • Valentin Giroux,
  • Arun K. Ghosh,
  • Ji Luo and
  • Yves Pommier

5 June 2015

Lasonolide A (LSA), a potent antitumor polyketide from the marine sponge, Forcepia sp., induces rapid and reversible protein hyperphosphorylation and premature chromosome condensation (PCC) at nanomolar concentrations independent of cyclin-dependent...

  • Article
  • Open Access
8 Citations
2,593 Views
14 Pages

The Role of T-Cadherin (CDH13) in Treatment Options with Garcinol in Melanoma

  • Sebastian Staebler,
  • Sebastian Hoechst,
  • Aranya Thongmao,
  • Nadja Schneider,
  • Anja-Katrin Bosserhoff and
  • Silke Kuphal

12 May 2024

Targeted therapies with chemotherapeutic agents and immunotherapy with checkpoint inhibitors are among the systemic therapies recommended in the guidelines for clinicians to treat melanoma. Although there have been constant improvements in the treatm...

  • Article
  • Open Access
8 Citations
5,142 Views
24 Pages

Genomic Space of MGMT in Human Glioma Revisited: Novel Motifs, Regulatory RNAs, NRF1, 2, and CTCF Involvement in Gene Expression

  • Mohammed A. Ibrahim Al-Obaide ,
  • Viswanath Arutla,
  • Manny D. Bacolod,
  • Wei Wang,
  • Ruiwen Zhang and
  • Kalkunte S. Srivenugopal

Background: The molecular regulation of increased MGMT expression in human brain tumors, the associated regulatory elements, and linkages of these to its epigenetic silencing are not understood. Because the heightened expression or non-expression of...

  • Article
  • Open Access
22 Citations
8,778 Views
14 Pages

HPV16 E6 Controls the Gap Junction Protein Cx43 in Cervical Tumour Cells

  • Peng Sun,
  • Li Dong,
  • Alasdair I. MacDonald,
  • Shahrzad Akbari,
  • Michael Edward,
  • Malcolm B. Hodgins,
  • Scott R. Johnstone and
  • Sheila V. Graham

5 October 2015

Human papillomavirus type 16 (HPV16) causes a range of cancers including cervical and head and neck cancers. HPV E6 oncoprotein binds the cell polarity regulator hDlg (human homologue of Drosophila Discs Large). Previously we showed in vitro, and now...

  • Review
  • Open Access
5 Citations
4,027 Views
17 Pages

Innovative Therapeutic Approaches for the Treatment of the Ocular Morbidities in Patients with EEC Syndrome

  • Vanessa Barbaro,
  • Filippo Bonelli,
  • Stefano Ferrari,
  • Giulia La Vella and
  • Enzo Di Iorio

2 February 2023

Ectrodactyly-Ectodermal dysplasia-Clefting (EEC) syndrome is caused by heterozygous missense point mutations in the p63 gene, an important transcription factor during embryogenesis and for stem cell differentiation in stratified epithelia. Most of th...

  • Article
  • Open Access
1,472 Views
17 Pages

IL-15 Promotes the Survival of Anti-Inflammatory (M2), Immunoinhibitory (IL-10+) Dermal Macrophages in Human Eyelid Skin Under IFNγ-Dominated Inflammatory Conditions

  • Dana-Lee Demetrius,
  • Sofia M. Perez,
  • Takahiro Suzuki,
  • Jennifer Gherardini,
  • Wendy Lee,
  • Jérémy Chéret and
  • Ralf Paus

13 August 2025

Interleukin (IL)-15 is primarily known as a pro-inflammatory and anti-apoptotic cytokine, which stimulates the proliferation and survival of key immunocytes, including macrophages (MACs). Yet, it remains unclear how IL-15 specifically impacts MACs in...

  • Review
  • Open Access
2,772 Views
21 Pages

Large-Scale Rice Mutant Establishment and High-Throughput Mutant Manipulation Help Advance Rice Functional Genomics

  • Eyob Kassaye Wolella,
  • Zhen Cheng,
  • Mengyuan Li,
  • Dandan Xia,
  • Jianwei Zhang,
  • Liu Duan,
  • Li Liu,
  • Zhiyong Li and
  • Jian Zhang

16 May 2025

Rice (Oryza sativa L.) is a stable food for over half of the world population, contributing 50–80% of the daily calorie intake. The completion of rice genome sequencing marks a significant milestone in understanding functional genomics, yet the...

  • Article
  • Open Access
2 Citations
6,652 Views
21 Pages

11 March 2024

There is tremendous interest in the production of recombinant proteins, particularly bispecific antibodies and antibody–drug conjugates for research and therapeutic use. Here, we demonstrate a highly versatile plasmid system that allows the rap...

  • Article
  • Open Access
26 Citations
5,313 Views
14 Pages

RNA-Based Assay for Next-Generation Sequencing of Clinically Relevant Gene Fusions in Non-Small Cell Lung Cancer

  • Caterina De Luca,
  • Francesco Pepe,
  • Antonino Iaccarino,
  • Pasquale Pisapia,
  • Luisella Righi,
  • Angela Listì,
  • Lorenza Greco,
  • Gianluca Gragnano,
  • Severo Campione and
  • Umberto Malapelle
  • + 13 authors

4 January 2021

Gene fusions represent novel predictive biomarkers for advanced non-small cell lung cancer (NSCLC). In this study, we validated a narrow NGS gene panel able to cover therapeutically-relevant gene fusions and splicing events in advanced-stage NSCLC pa...

  • Article
  • Open Access
3 Citations
3,288 Views
18 Pages

Human RPF1 and ESF1 in Pre-rRNA Processing and the Assembly of Pre-Ribosomal Particles: A Functional Study

  • Alexander Deryabin,
  • Anastasiia Moraleva,
  • Kira Dobrochaeva,
  • Diana Kovaleva,
  • Maria Rubtsova,
  • Olga Dontsova and
  • Yury Rubtsov

10 February 2024

Ribosome biogenesis is essential for the functioning of living cells. In higher eukaryotes, this multistep process is tightly controlled and involves a variety of specialized proteins and RNAs. This pool of so-called ribosome biogenesis factors inclu...

  • Article
  • Open Access
57 Views
16 Pages

Altered AADAC Modulates Trophoblast Invasion and Suggests a Potential Angiogenic Regulatory Role in Severe Preeclampsia

  • Hyo Jung An,
  • Dae Hyun Song,
  • Yu-min Kim,
  • Hyen Chul Jo,
  • Jong Chul Baek,
  • Juseok Yang and
  • Ji Eun Park

22 January 2026

Preeclampsia (PE) is a serious pregnancy complication characterized by hypertension and organ dysfunction. Its pathogenesis involves impaired trophoblast invasion and inadequate spiral artery remodeling; however, the underlying molecular mechanisms r...

  • Article
  • Open Access
1 Citations
1,357 Views
23 Pages

Reduction of NFX1-123 and HPV 16 E6 and E7 Decreased Telomerase and CENP-F in Cervical Cancer Cell Lines

  • Sreenivasulu Chintala,
  • Maura A. Dankoski,
  • Titus K. Maina,
  • Cliff I. Oduor,
  • Kevin M. Quist,
  • Jeffrey A. Bailey and
  • Rachel A. Katzenellenbogen

19 June 2025

Background: Telomerase activity is a cancer hallmark, and hTERT is the rate-limiting catalytic subunit of telomerase. In human papillomavirus type 16 E6 (16E6)-expressing epithelial cells, NFX1-123 augments and is required for full hTERT expression,...