Plant–Microbiome Interactions in Sustainable Agriculture

A special issue of Agronomy (ISSN 2073-4395). This special issue belongs to the section "Farming Sustainability".

Deadline for manuscript submissions: 30 November 2026 | Viewed by 241

Special Issue Editors


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Guest Editor
Department of Microbiology and Environmental Biotechnologies, Faculty of Plant Protection and Agroecology, Agricultural University—Plovdiv, 4000 Plovdiv, Bulgaria
Interests: plant–microbiome interactions; circular agriculture; soil and plant microbiomes; beneficial microorganisms; bio-/phytoremediation; biowaste composting and recycling
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Guest Editor
Soil Recuperation and Conservation Unit, CIEMAT, Avda. Complutense 40, 28040 Madrid, Spain
Interests: plant–microbiome-soil system; environmental chemistry; soil science; phytoremediation; nitrogen cycling; soil ecology; ecotoxicology; geochemistry
Special Issues, Collections and Topics in MDPI journals

E-Mail Website
Guest Editor
Department of Microbiology and Environmental Biotechnologies, Faculty of Plant Protection and Agroecology, Agricultural University—Plovdiv, 4000 Plovdiv, Bulgaria
Interests: plant–microbe interactions, with emphasis on rhizosphere and endophytic microbiomes and their role in plant growth and health; biological control and plant protection, including endophytic/entomopathogenic fungi and microbial antagonists against plant pathogens; beneficial microorganisms; microbial diversity in different habitats such as rhizosphere soils and composting systems

Special Issue Information

Dear Colleagues,

Microorganisms are the cornerstone of achieving high crop yields, producing clean and high-quality agricultural products, and protecting the environment. They form the basis for optimal soil and plant health management, leading to superior yields. Despite extensive knowledge accumulated to date, significant gaps remain in understanding the intricate mechanisms of interaction between microbiomes, plants, and the environment. The uncertainty is complemented by some questions regarding the interactions and effects caused by the application of diverse fertilisers, as well as chemical and biological pesticides, affecting both plants, physicochemical and biological characteristics of the soil. This Special Issue aims to bridge these gaps by providing solutions to key questions of interest to both scientists and practitioners. Original research manuscripts and reviews are welcome across a broad scope, encompassing soil and plant microbiomes and their influence on the agronomic indicators of crops in the changing environment. Works related to conventional, organic, no-till, and conservation agriculture are also encouraged.

Prof. Dr. Stefan Shilev
Dr. Rocio Millan
Dr. Mariana Petkova
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 250 words) can be sent to the Editorial Office for assessment.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Agronomy is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2600 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • plant-associated microbiome
  • soil health
  • plant health
  • microbial diversity
  • SynComs
  • circular agriculture
  • stressed agriculture
  • circularity
  • plant protection
  • beneficial microorganisms
  • nature-based solution
  • amendments

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Published Papers

This special issue is now open for submission.
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