Skip to Content

Epigenomes, Volume 8, Issue 3

2024 September - 13 articles

Cover Story: Intrinsically disordered regions (IDRs) are known to cause the oligomerization and accumulation of many proteins. In addition, plants utilize a novel mechanism harnessing the oligomerization capacity of α-Crystalline Domain (ACD)-containing proteins to accumulate the MBD5/6-silencing complex at DNA methylation sites within nuclear chromocenters. The work by Boone et al. shows that the addition of human or plant IDRs led to even more accumulation of MBD5/6 complexes at chromocenters. Furthermore, the removal of ACD proteins only partially reduced this accumulation phenotype. IDR- and ACD-mediated mechanisms can thus act combinatorially to induce high levels of protein multimerization and concentration in nuclear foci. View this paper
  • Issues are regarded as officially published after their release is announced to the table of contents alert mailing list .
  • You may sign up for email alerts to receive table of contents of newly released issues.
  • PDF is the official format for papers published in both, html and pdf forms. To view the papers in pdf format, click on the "PDF Full-text" link, and use the free Adobe Reader to open them.

Articles (13)

  • Review
  • Open Access
12 Citations
5,650 Views
15 Pages

15 September 2024

Many human diseases, such as malignant tumors and neurological diseases, have a complex pathophysiological etiology, often accompanied by aberrant epigenetic changes including various histone modifications. Plant homologous domain finger protein 8 (P...

(This article belongs to the Special Issue A Commemorative Issue in Honor of the 30th Anniversary of the Epigenetics Society)
  • Review
  • Open Access
5 Citations
4,514 Views
17 Pages

Retrotransposons and Diabetes Mellitus

  • Andromachi Katsanou,
  • Charilaos Kostoulas,
  • Evangelos Liberopoulos,
  • Agathocles Tsatsoulis,
  • Ioannis Georgiou and
  • Stelios Tigas

6 September 2024

Retrotransposons are invasive genetic elements, which replicate by copying and pasting themselves throughout the genome in a process called retrotransposition. The most abundant retrotransposons by number in the human genome are Alu and LINE-1 elemen...

  • Review
  • Open Access
35 Citations
10,351 Views
24 Pages

Decoding the Epigenetics of Infertility: Mechanisms, Environmental Influences, and Therapeutic Strategies

  • Lara Saftić Martinović,
  • Tea Mladenić,
  • Dora Lovrić,
  • Saša Ostojić and
  • Sanja Dević Pavlić

5 September 2024

Infertility is a complex condition caused by a combination of genetic, environmental, and lifestyle factors. Recent advances in epigenetics have highlighted the importance of epigenetic changes in fertility regulation. This review aims to provide a c...

(This article belongs to the Collection Feature Papers in Epigenomes)
  • Article
  • Open Access
1 Citations
2,729 Views
10 Pages

Proteins are localized and concentrated at cellular and genomic locations for specific and efficient functions. Efforts to understand protein accumulation in eukaryotic organisms have primarily focused on multivalent interactions between intrinsicall...

(This article belongs to the Collection Epigenetic Control in Plants)
  • Article
  • Open Access
2 Citations
3,443 Views
28 Pages

Genome-Wide Methylation Profiling of Peripheral T–Cell Lymphomas Identifies TRIP13 as a Critical Driver of Tumor Proliferation and Survival

  • Pawel Nowialis,
  • Julian Tobon,
  • Katarina Lopusna,
  • Jana Opavska,
  • Arshee Badar,
  • Duo Chen,
  • Reem Abdelghany,
  • Gene Pozas,
  • Jacob Fingeret and
  • Rene Opavsky
  • + 4 authors

Cytosine methylation contributes to the regulation of gene expression and normal hematopoiesis in mammals. It is catalyzed by the family of DNA methyltransferases that include DNMT1, DNMT3A, and DNMT3B. Peripheral T–cell lymphomas (PTCLs) repre...

  • Article
  • Open Access
9 Citations
4,755 Views
19 Pages

Sex-Specific Associations between Prenatal Exposure to Bisphenols and Phthalates and Infant Epigenetic Age Acceleration

  • Gillian England-Mason,
  • Sarah M. Merrill,
  • Jiaying Liu,
  • Jonathan W. Martin,
  • Amy M. MacDonald,
  • David W. Kinniburgh,
  • Nicole Gladish,
  • Julia L. MacIsaac,
  • Gerald F. Giesbrecht and
  • Deborah Dewey
  • + 2 authors

We examined whether prenatal exposure to two classes of endocrine-disrupting chemicals (EDCs) was associated with infant epigenetic age acceleration (EAA), a DNA methylation biomarker of aging. Participants included 224 maternal–infant pairs fr...

(This article belongs to the Collection Feature Papers in Epigenomes)
  • Review
  • Open Access
67 Citations
12,036 Views
20 Pages

Unravelling the Epigenetic Code: DNA Methylation in Plants and Its Role in Stress Response

  • Emanuela Talarico,
  • Alice Zambelli,
  • Fabrizio Araniti,
  • Eleonora Greco,
  • Adriana Chiappetta and
  • Leonardo Bruno

Environmental stress significantly affects plant growth, development, and survival. Plants respond to stressors such as temperature fluctuations, water scarcity, nutrient deficiencies, and pathogen attacks through intricate molecular and physiologica...

  • Article
  • Open Access
1 Citations
2,760 Views
14 Pages

An understanding of the molecular mechanism whereby an environmental chemical causes a disease is important for the purposes of future applications. In this study, a multiomics workflow was designed to combine several publicly available datasets in o...

  • Systematic Review
  • Open Access
3 Citations
3,167 Views
21 Pages

DNA Methylation as Drug Sensitivity Marker in RCC: A Systematic Review

  • Antonios Koudonas,
  • Georgios Dimitriadis,
  • Anastasios Anastasiadis and
  • Maria Papaioannou

Patient response after treatment of renal cell cancer (RCC) with systemic agents, which include various drug categories, is generally poor and unpredictable. In this context, the ideal drug administration includes tools to predict the sensitivity of...

  • Review
  • Open Access
2 Citations
3,559 Views
15 Pages

The response of the brain to radiation is important for cancer patients receiving whole or partial brain irradiation or total body irradiation, those exposed to irradiation as part of a nuclear accident or a nuclear war or terrorism event, and for as...

(This article belongs to the Collection Feature Papers in Epigenomes)
  • Review
  • Open Access
29 Citations
6,771 Views
17 Pages

Oncogenic Roles of UHRF1 in Cancer

  • Ahhyun Kim and
  • Claudia A. Benavente

Ubiquitin-like with PHD and RING finger domains 1 (UHRF1) is an essential protein involved in the maintenance of repressive epigenetic marks, ensuring epigenetic stability and fidelity. As an epigenetic regulator, UHRF1 comprises several functional d...

  • Review
  • Open Access
2 Citations
4,949 Views
18 Pages

The heart is the first organ formed during mammalian development and functions to distribute nutrients and oxygen to other parts of the developing embryo. Cardiomyocytes are the major cell types of the heart and provide both structural support and co...

(This article belongs to the Special Issue A Commemorative Issue in Honor of the 30th Anniversary of the Epigenetics Society)
  • Article
  • Open Access
3,207 Views
15 Pages

DNA Hypomethylation Underlies Epigenetic Swapping between AGO1 and AGO1-V2 Isoforms in Tumors

  • Jean S. Fain,
  • Camille Wangermez,
  • Axelle Loriot,
  • Claudia Denoue and
  • Charles De Smet

Human tumors progress in part by accumulating epigenetic alterations, which include gains and losses of DNA methylation in different parts of the cancer cell genome. Recent work has revealed a link between these two opposite alterations by showing th...

XFacebookLinkedIn
Epigenomes - ISSN 2075-4655