Journal Description
Seeds
Seeds
is an international, peer-reviewed, open access journal on seed science and technology published quarterly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within ESCI (Web of Science), Scopus, EBSCO, and other databases.
- Journal Rank: CiteScore - Q2 (Agricultural and Biological Sciences (miscellaneous))
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 30.9 days after submission; acceptance to publication is undertaken in 3.6 days (median values for papers published in this journal in the first half of 2025).
- Recognition of Reviewers: APC discount vouchers, optional signed peer review, and reviewer names published annually in the journal.
- Seeds is a companion journal of Agronomy.
Latest Articles
Evaluation of Sunflower Seed Moisture Content by Spectral Characteristics of Inflorescences in the VNIR
Seeds 2025, 4(4), 55; https://doi.org/10.3390/seeds4040055 - 29 Oct 2025
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Sunflowers are one of the most important agricultural crops in the world. Given the high importance of sunflower products in the world market and the scale of their cultivation, the introduction of precision farming technologies into its culture can have a significant economic
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Sunflowers are one of the most important agricultural crops in the world. Given the high importance of sunflower products in the world market and the scale of their cultivation, the introduction of precision farming technologies into its culture can have a significant economic and environmental effect. This study demonstrated the fundamental possibility of developing a technology for rapid, remote, and non-invasive assessment of sunflower seed moisture to determine the optimal timing for desiccation and harvesting. It has been shown that the moisture content of sunflower seeds can be assessed with high accuracy based on the spectral characteristics of the underside of the inflorescences obtained using a hyperspectral camera in the visible and near-infrared range (VNIR) (from 450 to 950 nm). Random forest regression (RFR) was used to predict sunflower seed moisture. The model performed excellently on the training data (R2c = 1.00; MAEc = 0.58; RMSEc = 0.74, MAPEc = 1.29) and with a high performance on the testing data (R2t = 0.98, MAEt = 2.99, RMSEt = 3.28, MAPEt = 12.22). The most significant vegetation indices for determining moisture are CCI, Booch, Datt3, Datt4, LSIRed, modPRI, SR5, TCARI, and TCARI2.
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Open AccessArticle
Linking Seed Size and Thermal Tolerance in Seed Germination of Hymenaea stigonocarpa, a Fire-Prone Neotropical Savanna Tree
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Marcilio Fagundes, Maria Isabela Rodrigues Silva, Bruno Henrique Silva Mayrink, Walisson Kenedy-Siqueira, Luiz Henrique Arymura Figueiredo and Tatiana Cornelissen
Seeds 2025, 4(4), 54; https://doi.org/10.3390/seeds4040054 - 28 Oct 2025
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The Neotropical Savanna (Cerrado) is a fire-prone biome characterized by seasonal climate, nutrient-poor soils, and variable fire regimes. While fire-induced germination responses are well documented in Cerrado plants, the role of seed size in mediating thermal tolerance remains poorly understood. Here, we investigate
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The Neotropical Savanna (Cerrado) is a fire-prone biome characterized by seasonal climate, nutrient-poor soils, and variable fire regimes. While fire-induced germination responses are well documented in Cerrado plants, the role of seed size in mediating thermal tolerance remains poorly understood. Here, we investigate how seed size and fire-related heat treatments influence germination in Hymenaea stigonocarpa, a keystone Cerrado tree species. Specifically, we test the predictions that (i) low to moderate fire temperatures (<270 °C) do not impair seed germination and (ii) larger seeds exhibit greater heat tolerance than smaller seeds. We exposed 360 seeds from 30 individual trees to five heat-shock treatments (27, 100, 150, 200, and 270 °C) simulating fire intensities typically experienced in the Cerrado. Our results show that H. stigonocarpa produces relatively large seeds with an average germination rate of approximately 42%. The average time required for germination was 12.18 ± 0.43 (average ± standard error) days. The time required for seed germination varied significantly as a function of heat-shock treatment and seed mass, with seeds exposed to the highest temperature (270 °C) taking longer to germinate. Moreover, seed mass had a positive effect on the time required for seed germination. The germination percentage remains stable across heat treatments and seed sizes, indicating that H. stigonocarpa seeds exhibit characteristics typical of heat-tolerant species rather than those of heat-stimulated species. Our study showed that H. stigonocarpa trees produce large seeds that germinate quickly and are tolerant to moderate temperatures. These seed traits play a crucial role in the reproductive success of individual plants in fire-prone, nutrient-poor, and water-limited ecosystems. Furthermore, our results offer important guidance by emphasizing the role of seed size in effective restoration initiatives.
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Open AccessArticle
Phytonutrients and Bioactive Compounds in Oriental Tobacco (Nicotiana tabacum L.) Seeds—A New Perspective for the Food Industry
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Violeta Nikolova, Nikolay Nikolov, Todorka Petrova, Venelina Popova, Zhana Petkova, Milena Ruskova and Olga Teneva
Seeds 2025, 4(4), 53; https://doi.org/10.3390/seeds4040053 - 25 Oct 2025
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A sustainable economy and the drive to reduce agro-industrial waste worldwide motivate the increased interest in alternative uses of traditionally cultivated plants such as tobacco. Tobacco seeds are an underutilized resource with enormous potential for application in various areas of human life. The
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A sustainable economy and the drive to reduce agro-industrial waste worldwide motivate the increased interest in alternative uses of traditionally cultivated plants such as tobacco. Tobacco seeds are an underutilized resource with enormous potential for application in various areas of human life. The present study aims to characterize the phytochemical composition and nutritional potential of Oriental tobacco seeds grown in Bulgaria, in order to support their possible application in areas outside the tobacco industry. Two Oriental tobacco varieties (“Krumovgrad 90” and “Krumovgrad 58”) from three production regions were explored and comparatively evaluated in terms of their physical and chemical indicators, determined by standardized methods. The results showed high protein (22.57–23.84%) and energy content (482–531 kcal/100 g), combined with relatively low carbohydrate levels (3.79–4.03%) and the presence of bioactive compounds, such as polyphenols (288–357 mg GAE/100 g). The seeds contained significant amount of oil (36.31–39.24%), of which the fatty acid profile included 16 identified components, with linoleic (72.0–74.4%), oleic (11.2–13.5%), palmitic (9.6–10.2%), and stearic (1.8–2.5%) acids taking the greatest share. The sterol fraction was dominated by β-sitosterol (43.5–46.8%), followed by sitostanol, campesterol and stigmasterol, with a stable distribution between the samples. The main tocol was γ-tocotrienol (56.5–61.4%), with α-tocotrienol being detected only in one of the varieties (“Krumovgrad 58”, 13.3%). The phospholipid fraction showed variations between the samples, with a dominant presence of phosphatidylinositol (18.0–20.4%). The results from the study confirmed the tangible potential of tobacco seeds as a source of biologically active substances in the development of functional foods and dietary supplements.
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Open AccessArticle
Seed Dormancy Variability in Lonicera etrusca and Its Relationship with Environmental Heterogeneity Across Localities
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Alejandro Santiago, Jesus Márquez-Pablo, Natalia Celaya-Rojas, José María Herranz and Pablo Ferrandis
Seeds 2025, 4(4), 52; https://doi.org/10.3390/seeds4040052 - 24 Oct 2025
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Seed dormancy is a key ecological attribute influencing germination timing and the ability of species to establish in variable environments. This study investigated whether inter-population variability in seed dormancy expression exists in Lonicera etrusca, a Mediterranean shrub known for producing seeds with
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Seed dormancy is a key ecological attribute influencing germination timing and the ability of species to establish in variable environments. This study investigated whether inter-population variability in seed dormancy expression exists in Lonicera etrusca, a Mediterranean shrub known for producing seeds with underdeveloped embryos and multiple dormancy types. Seeds were collected from four geographically and ecologically distinct populations in central Iberia and subjected to a series of germination experiments simulating natural seasonal temperature regimes, stratification treatments, and gibberellic acid application. Across all populations, seeds exhibited morphological dormancy (MD) and varying degrees of morphophysiological dormancy (MPD), including non-deep simple and deep complex types. Despite high intra-specific variability in dormancy expression, no significant differences were found among populations for germination patterns or embryo growth responses. This indicates that dormancy variability is an intrinsic, conserved feature of the species rather than a locally adaptive trait. The homogenization of germination strategies across populations may be facilitated by bird-mediated seed dispersal, promoting gene flow and limiting local selection. These findings support the hypothesis that dormancy polymorphism in L. etrusca reflects a flexible germination strategy that enhances colonization potential across heterogeneous Mediterranean environments, rather than an environmentally induced plastic response.
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Open AccessArticle
Application of Microbubbles Combining with Disinfectants to Inactivate Salmonella Typhimurium on Alfalfa Seeds and the Effects on Sprouting
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Chih-Yao Hou, Shih-Kao Chou, Jong-Shinn Wu, Hsiu-Ling Chen, Pei-Wen Zhang, Chih-Tung Liu, Chun-Ping Hsiao and Chia-Min Lin
Seeds 2025, 4(4), 51; https://doi.org/10.3390/seeds4040051 - 24 Oct 2025
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Microbial contamination is the main safety concern of sprouts and seeds are the major source. High concentrations of sanitizers (>10,000 mg/kg) are recommended for effective sanitation. Microbubble (MB) was reported to elevate sanitizer efficacy. Hence, MBs combined with disinfectants, chlorine dioxide (ClO2
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Microbial contamination is the main safety concern of sprouts and seeds are the major source. High concentrations of sanitizers (>10,000 mg/kg) are recommended for effective sanitation. Microbubble (MB) was reported to elevate sanitizer efficacy. Hence, MBs combined with disinfectants, chlorine dioxide (ClO2, 500 ppm), and slightly acidic electrolyzed water (SAEW, 250 ppm), were used to inactivate Salmonella Typhimurium on alfalfa seeds. After fulfilling MBs for 10 min, alfalfa seeds were washed in 10 L of water for 10, 20, or 30 min. Compared with untreated seeds, S. Typhimurium reductions obtained by SAEW-MBs (SMBs) and ClO2-MBs (CMBs) for 20 min were 3.8 and 3.3 log CFU/g, respectively. Conversely, the 20 min treatments of SAEW and ClO2 only obtained reductions of 0.9 and 1.1 log CFU/g, respectively. More surface ruptures on the seeds treated with CMBs were observed under a scanning electron microscope compared with the ones treated by water and ClO2 only. No adverse effects on the seed germination rate and the weight yield of sprouts were observed when treated with CMBs for 20 min. An MB device with capacity of 100 L was assembled and achieved reductions of 3.9 and 3.2 log CFU/g of natural microbes and S. Typhimurium, respectively, after 20 min CMB washing. Additionally, an MB device at 250 L was assembled and achieved 3.0 log CFU/g reduction in natural microbes. This study demonstrated that MBs enhanced the efficacy of disinfectants and could be applied in industrial-scale operations.
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Open AccessArticle
Germination Potential of Six Native Plant Species for Phytoremediation of Hydrocarbon Contaminated Peat Soils
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Mahdiyeh Safaripour-Chafi, Amalesh Dhar, Sarah R. Wilkinson and M. Anne Naeth
Seeds 2025, 4(4), 50; https://doi.org/10.3390/seeds4040050 - 24 Oct 2025
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Research on the remediation of hydrocarbon contaminated peatlands is limited; in particular, hydrocarbon effects on seed germination is critical for effective reclamation. This study examined germination responses of six wetland plant species under greenhouse and laboratory conditions. Seeds were exposed to hydrocarbon-contaminated peat
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Research on the remediation of hydrocarbon contaminated peatlands is limited; in particular, hydrocarbon effects on seed germination is critical for effective reclamation. This study examined germination responses of six wetland plant species under greenhouse and laboratory conditions. Seeds were exposed to hydrocarbon-contaminated peat soil and ground water under two light treatments (light, total darkness) for four weeks. Species specific responses in seed germination and germination velocity occurred under different light conditions and exposure to hydrocarbon-contaminated peat soil and water. Light significantly impacted germination, while hydrocarbon-contaminated peat soil and water had no effect. Glyceria grandis (83.5%) and Scirpus microcarpus (74%) had significantly higher germination rates even in contaminated treatments than Carex aquatilis (28%) and Typha latifolia (38%), which had modest germination. Modified Timson’s Index (germination velocity) was significantly greater in Scirpus microcarpus (21.90) and Glyceria grandis (19.20) than in other species after 30 days. Carex utriculata and Scirpus validus had ≤0.5% germination and ≤0.2 velocity. The overall species mean germination time was >9 days with a low (≤0.7) germination index. Ordination using several germination variables separated some species. These findings suggest Scirpus microcarpus and Glyceria grandis have high tolerance to hydrocarbon contamination and may be effective candidates for the phytoremediation and restoration of contaminated peatlands.
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Open AccessReview
Omics for Improving Seed Quality and Yield
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Jake Cummane, William J. W. Thomas, Maria Lee, Mohammad Sayari, David Edwards, Jacqueline Batley and Aria Dolatabadian
Seeds 2025, 4(4), 49; https://doi.org/10.3390/seeds4040049 - 24 Oct 2025
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Seed-related traits such as seed size, germination, vigour, dormancy, biochemical composition, and stress resistance are critical to ensuring agricultural productivity and global food security, particularly in current scenarios of climate change and environmental unpredictability. This review examines the transformative potential of omics technologies,
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Seed-related traits such as seed size, germination, vigour, dormancy, biochemical composition, and stress resistance are critical to ensuring agricultural productivity and global food security, particularly in current scenarios of climate change and environmental unpredictability. This review examines the transformative potential of omics technologies, encompassing genomics, transcriptomics, proteomics, metabolomics, epigenomics, and phenomics, in enhancing our understanding of seed biology and its applications in crop improvement. Genomics and transcriptomics are key technologies in future plant breeding and gene editing to optimise seed yield and quality. We reviewed the role of metabolomic approaches in uncovering the molecular mechanisms behind seed germination, vigour, dormancy, and the proteomic advances to elucidate markers of seed quality, combining these omic technologies to decipher DOG1 as a marker of dormancy. Both biotic and abiotic stress resistance in seeds were reviewed from a multi-omics perspective to determine the best avenues for improving the resilience of seeds against drought, salinity and pathogens. Moreover, omics approaches have been reviewed to optimise plant–microbe interactions, particularly in enhancing symbiotic relationships within the soil microbiome.
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(This article belongs to the Special Issue Progress in Multi-omics and Bioinformatics Approaches: Seed Microbiome and Metagenome)
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Open AccessArticle
Mutation in the LONGIFOLIA1 Gene Resulted in Suppressed Insensitivity of Arabidopsis thaliana proteolysis6 Mutant to Ethylene During Seed Germination
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Xu Wang, Ying Luo, Yuan Cao, Yujin Gong, Francoise Corbineau and Yong Xiang
Seeds 2025, 4(4), 48; https://doi.org/10.3390/seeds4040048 - 30 Sep 2025
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Seed dormancy and germination is regulated by internal hormones and exogenous environment cues. Ethylene is one of the hormones that break seed dormancy and induce seed germination. Our previous study showed that N-degron pathway gene, proteolysis6 (PRT6) was involved in dormancy
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Seed dormancy and germination is regulated by internal hormones and exogenous environment cues. Ethylene is one of the hormones that break seed dormancy and induce seed germination. Our previous study showed that N-degron pathway gene, proteolysis6 (PRT6) was involved in dormancy release by ethylene, the defection of which exhibiting ethylene-insensitivity in Arabidopsis thaliana. In the present study, through screening an ethyl methyl sulfonate-mutagenized (EMS) population of prt6−1, we isolated a recessive mutant that acted as a suppressor of prt6 that rescued its insensitivity to ethylene as well as a phenotype of shorter silique length. Further bulk segregant analysis on F2 population identified a premature termination located in the third exon of LONGIFOLIA1 (LNG1), previously reported in the regulation of longitudinal cell elongation. Mutation of LNG1 in prt6−1 background by CRISPR-Cas9 confirmed that LNG1 was epistatic to PRT6 in seed responsiveness to ethylene. Our finding proposed the pleiotropic effect of LNG1 in seed dormancy breakage by ethylene via PRT6, providing novel functional component at the downstream of the coordinated PRT6 and ethylene signaling pathway.
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Open AccessArticle
Seed Nanopriming Improves Jalapeño Pepper Seedling Quality for Transplantation
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Erick H. Ochoa-Chaparro, Juan J. Patiño-Cruz, Julio C. Anchondo-Páez, Alan Alvarez-Monge, Cristina L. Franco-Lagos and Esteban Sánchez
Seeds 2025, 4(3), 47; https://doi.org/10.3390/seeds4030047 - 22 Sep 2025
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Nanopriming with metal nanoparticles (NPs) is a promising strategy for improving seedling quality in horticultural crops. This study evaluated the effects of hydropriming, ZnO, SiO2, ZnO + SiO2, a ZnMo nanofertilizer, and two commercial biostimulants (Osmoplant and Codasil) on
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Nanopriming with metal nanoparticles (NPs) is a promising strategy for improving seedling quality in horticultural crops. This study evaluated the effects of hydropriming, ZnO, SiO2, ZnO + SiO2, a ZnMo nanofertilizer, and two commercial biostimulants (Osmoplant and Codasil) on the early development of Capsicum annuum L. seedlings. Morphological, physiological, and biochemical traits, including biomass, stem architecture, number of leaves, chlorophylls, carotenoids, SPAD index, and nitrate reductase (NR) activity, were measured under controlled conditions. The ZnO and ZnO + SiO2 treatments promoted stronger root growth, higher pigment content, and higher NR activity. SiO2 alone and ZnMo showed intermediate improvements, while Osmoplant and Codasil had more limited effects. Multivariate analyses provided complementary information: heat maps revealed correlations between traits, PCA differentiated treatment responses, and radar charts integrated performance profiles. Overall, the results provide promising evidence that seed nanopriming, particularly with ZnO and ZnO + SiO2, improves seedling vigor and transplant potential in jalapeño peppers.
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Open AccessArticle
UVB Stress Induced Changes in Germination and Carbohydrate Mobilization in Chenopodium Quinoa Willd. Seeds
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Marco Carli, Lorenzo Guglielminetti and Thais Huarancca Reyes
Seeds 2025, 4(3), 46; https://doi.org/10.3390/seeds4030046 - 16 Sep 2025
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Chenopodium quinoa Willd. (quinoa) is a very promising crop due to its nutraceutical properties and strong tolerance to extreme conditions, including high UVB. However, the physiological mechanisms underlying its adaptation to high UVB are still unclear, especially during germination as its traditional sowing
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Chenopodium quinoa Willd. (quinoa) is a very promising crop due to its nutraceutical properties and strong tolerance to extreme conditions, including high UVB. However, the physiological mechanisms underlying its adaptation to high UVB are still unclear, especially during germination as its traditional sowing consists of either broadcasting or continuous stream distribution in furrows. We evaluated the response of germinating quinoa seeds to acute UVB radiation, looking at the mobilization of starch reserves as well as the utilization of starch and free sugars. Biometric and physiological traits were evaluated in control (0 W m−2) and UVB (3.4 W m−2)-exposed seeds during a 24 h treatment starting with seed imbibition. Quinoa exposed to UVB showed a delay in germination and strong reduction in root elongation. Although the negative effect of UVB on germination was fully recovered at 48 h of imbibition, that on root elongation was irreversible, especially with a longer exposure time. Further analysis showed low differences in the concentration of free sugars, except at 2 and 24 h of treatment. Furthermore, starch mobilization in UVB-treated seeds was strongly reduced compared to control. This was associated with the amylolytic activity analysis, which showed strong reductions in both α- and β-amylase activities during the whole treatment, indicating that UVB strongly reduced enzyme activation for the mobilization and use of starch reserves. Overall, these data suggest that quinoa seeds can regulate the expression of genes encoding enzymes involved in reserve mobilization, in order to resist to acute UVB radiation and maintain seed viability.
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Open AccessArticle
Different Germination Strategies Displayed by Three Potamogeton Species: P. natans, P. lucens, and P. pectinatus
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Carmen Díaz-Paniagua and Rocío Fernández-Zamudio
Seeds 2025, 4(3), 45; https://doi.org/10.3390/seeds4030045 - 12 Sep 2025
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Aquatic plants may rely on seeds to promote population persistence after severe disturbances, such as droughts. We characterized the seed germination dynamics for three Potamogeton species following seed storage under dry versus submerged conditions. Overall germination levels were highest for P. lucens and,
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Aquatic plants may rely on seeds to promote population persistence after severe disturbances, such as droughts. We characterized the seed germination dynamics for three Potamogeton species following seed storage under dry versus submerged conditions. Overall germination levels were highest for P. lucens and, more specifically, were higher after submerged storage (70.4%) than dry storage (56.0%). Overall germination levels were lower for the two other species and displayed a different response to storage conditions; they were higher after dry storage (P. natans: 24.6%; P. pectinatus: 28.1%) than submerged storage (10.8 and 7.1%, respectively). Only P. natans would have likely made a large seed bank contribution as follows: 42.2% of its seeds remained ungerminated and viable after submerged storage, while this figure was 17.4% for seeds that had experienced dry storage. Our results suggest the species differ in their reproductive strategies. Sexual reproduction plays an important role in Potamogeton lucens, adding new individuals to plant populations every year; however, the low viability of the species’ ungerminated seeds suggest its seed bank contribution may be small, rendering it vulnerable to long periods of unfavourable environmental conditions. In contrast, P. natans would likely make a larger seed bank contribution, underscoring the role its seeds may play in population persistence across years. Potamogeton pectinatus may minimally rely on its seeds, which fits with its predominant use of vegetative reproduction in the field. While its seeds might contribute little to population persistence, they may nonetheless promote genetic variability among populations.
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Open AccessArticle
Biostimulant Potential of Colombian Mangrove-Associated Pseudomonas spp. for Sustainable Seed Priming
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Gustavo Echeverri-Jaramillo, Flaviano Trasmundi, Junior Bernardo Molina-Hernández, Chiara Rossi, Fabio Stagnari and Clemencia Chaves-López
Seeds 2025, 4(3), 44; https://doi.org/10.3390/seeds4030044 - 12 Sep 2025
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Modern agriculture faces critical challenges from soil degradation and excessive use of chemical fertilizers, threatening sustainable seed germination and crop establishment. The main objective of this research was to evaluate the feasibility of using Pseudomonas spp. isolated from Colombian mangrove sediments as biofertilizers
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Modern agriculture faces critical challenges from soil degradation and excessive use of chemical fertilizers, threatening sustainable seed germination and crop establishment. The main objective of this research was to evaluate the feasibility of using Pseudomonas spp. isolated from Colombian mangrove sediments as biofertilizers to enhance crop productivity, with an emphasis on Lactuca sativa (lettuce) seed-to-seedling transition. Fifty-eight isolates were characterized and screened for their ability to improve the germination of the lettuce seeds, but only nine strains showed promising activity. The strains were identified at the species level and screened for Plant growth-promoting rhizobacteria (PGPR) traits such as indole-3-acetic acid (IAA) production, phosphate solubilization, organic acid production, and salt tolerance (5%). Four different species were identified, namely Pseudomonas putida (one strain), Pseudomonas monteiilli (two strains), Pseudomonas taiwanensis (one strain), and Pseudomonas aeruginosa (four strains). P. aeruginosa strains P8 and P9 demonstrated exceptional performance, significantly improving root elongation, seedling biomass, and antioxidant activity compared with the uninoculated plants in vitro. These strains showed dual agrobiotechnological value: (i) enhancing early seedling vigor through hormonal stimulation and (ii) improving nutrient availability via phosphate solubilization. Our findings highlight the biotechnological potential of mangrove-associated Pseudomonas spp. as a sustainable alternative to chemical fertilizers, particularly for seed priming and seedling establishment systems in stress-prone soils.
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Open AccessArticle
H+-ATPases Regulated by Auxin and ABA Mediate Acid Growth of Soybean Embryonic Axis During Germination
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Jacymara Lopes Pereira, Geovanna Vitória Olimpio, Fernanda Silva Coelho, Maria Luiza Carvalho Santos, Juliana Lopes Moraes, Deise Paes, Sara Sangi, Amanda Azevedo Bertolazi, Alessandro Coutinho Ramos and Clícia Grativol
Seeds 2025, 4(3), 43; https://doi.org/10.3390/seeds4030043 - 4 Sep 2025
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Soybean seeds (Glycine max) are of great economic and nutritional importance due to their high oil and protein content. Seed germination is an essential process that influences crop yield and quality. The seed embryo resumes growth when it imbibes, which induces
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Soybean seeds (Glycine max) are of great economic and nutritional importance due to their high oil and protein content. Seed germination is an essential process that influences crop yield and quality. The seed embryo resumes growth when it imbibes, which induces the expression of genes related to cell expansion. The role of acid growth in the embryonic axis during germination is not well characterized. Thus, the aim of this study was to verify the contribution of acid growth in the soybean embryonic axis germination. Acid growth is mediated by the acidification of extracellular medium due to the action of H+-ATPases, which activate expansins. We found that the expression of expansins was significantly increased throughout the germination. The expression of H+-ATPases was significantly increased at 3 and 24 h after imbibition (HAI), with major pumping activity at 24 HAI. The auxin and ABA signaling cascades during soybean germination suggest that these hormones are involved with the regulation of H+-ATPase in germinating soybean. To verify the influence of auxin and ABA on H+-ATPase functioning during germination, we treated seeds with IAA, 2,4D, ABA, and ATPase inhibitor, and germinated them in purple agar medium. We observed that IAA, 2,4D, and ABA affected H+-ATPase functioning, by delaying or inhibiting soybean germination. Our results indicate the role of acid growth controlled by H+-ATPase and its regulators—auxin and ABA—in the soybean embryonic axis during germination.
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Open AccessArticle
What Bacteria Are Present in the Endosphere of Lettuce Seeds and Why?
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Polina Kuryntseva, Darya Tarasova, Nataliya Pronovich, Ilsina Gilmutdinova, Gulnaz Galieva, Liliya Biktasheva and Svetlana Selivanovskaya
Seeds 2025, 4(3), 42; https://doi.org/10.3390/seeds4030042 - 3 Sep 2025
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Increasing demand for high-quality food is driving the development of biologized farming methods, which involve the use of microorganisms, including endophytes, to stimulate plant growth. However, research on the composition of endosphere microbiomes is limited. The study presents an analysis of the bacterial
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Increasing demand for high-quality food is driving the development of biologized farming methods, which involve the use of microorganisms, including endophytes, to stimulate plant growth. However, research on the composition of endosphere microbiomes is limited. The study presents an analysis of the bacterial endophytic microbiome in lettuce seeds (Lactuca sativa L., cv. Ozornik) using high-throughput sequencing of 16S rRNA amplicons. It evaluates the taxonomic composition and putative functional properties of seed endophytic bacteria. The microbial community exhibited low diversity (Shannon index ranged from 1.1 to 1.84, Simpson index from 0.57 to 0.83). The bacterial endophytic community of lettuce seeds was dominated by Pseudomonadota (83%), Actinomycetota (14%), and Bacillota (3%). The genera identified within the microbiome included Pantoea (32%), Rhodococcus (13%), Candidatus Profftella (13%), Janthinobacterium (7%), Pseudomonas (9%), Enterococcus (3%), and Alcaligenes (2%), which exhibit a broad spectrum of beneficial properties: plant growth promotion (PGPB), suppression of phytopathogens, enhanced stress tolerance, participation in contaminant biodegradation, and heavy metal detoxification. The structure and functional potential of the microbiome vary between samples, potentially due to differences in source material and cultivation conditions. The obtained results expand our understanding of the composition and functions of endophytic bacteria in lettuce seeds, which is important for the development of novel biocontrol agents for plants consumed by humans in an unprocessed form.
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Open AccessArticle
Comparative Study of Pinus radiata Plant Production Methods: Classical Seed Germination vs. Somatic Embryogenesis, from Operative to Biochemical Approaches
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Ander Castander-Olarieta, Javier Herrero, Caroline Teyssier, Paloma Moncaleán and Itziar A. Montalbán
Seeds 2025, 4(3), 41; https://doi.org/10.3390/seeds4030041 - 26 Aug 2025
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Because of the effects of climate change, a shortage of seeds from superior mother trees for forestry breeding programmes can occur. While biotechnological tools can help address this challenge, the benefits and drawbacks of each technique need to be evaluated. In this work,
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Because of the effects of climate change, a shortage of seeds from superior mother trees for forestry breeding programmes can occur. While biotechnological tools can help address this challenge, the benefits and drawbacks of each technique need to be evaluated. In this work, a comparative Pinus radiata plantlet production study was performed using two different approaches: seeds versus somatic embryos. For each procedure, the number of plantlets obtained was recorded, and the manual labour time was calculated. The skills and time required were higher for somatic embryogenesis, but so was the number of plantlets obtained: 3660 acclimatized somatic plantlets versus 1124 acclimatized zygotic plantlets. The number of different genotypes obtained was higher when germinating mature seeds, but somatic embryogenesis coupled with cryopreservation offers the advantage of having a backup for field-tested material. Additionally, analyses of carbohydrates, total protein and dry weight of somatic and zygotic embryos were carried out. These analyses revealed considerable differences between somatic and zygotic embryos but underlined the importance of high sucrose levels for germination in both systems. In conclusion, each technique offers advantages and disadvantages, and the choice will depend on the objective, the species and the value of the material to be propagated.
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Open AccessReview
Empowering Smallholder Farmers by Integrating Participatory Research and Establishing Village-Based Forage Seed Enterprises to Enhance On-Farm Productivity and Local Seed Supply
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Muhammad Shoaib Tufail, Gaye L. Krebs, Muhammad S. Quddus, Alison Southwell, John W. Piltz, Mark R. Norton and Peter C. Wynn
Seeds 2025, 4(3), 40; https://doi.org/10.3390/seeds4030040 - 19 Aug 2025
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Food and nutritional insecurity, alongside poverty, remain formidable challenges within smallholder crop–livestock mixed farming systems, predominantly found in Asia and Africa, which are the primary focus of this review. Livestock stands as a crucial asset in these systems, providing food and income for
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Food and nutritional insecurity, alongside poverty, remain formidable challenges within smallholder crop–livestock mixed farming systems, predominantly found in Asia and Africa, which are the primary focus of this review. Livestock stands as a crucial asset in these systems, providing food and income for families. However, livestock productivity is often constrained by poor-quality feed, predominantly composed of crop residues. This is compounded by limited access to high-quality forage seeds and the misconception that limited land and water resources should be devoted to cereal production. Furthermore, formal seed supply chains for forages are often underdeveloped or non-existent, making it difficult for farmers to access quality seed. The integration of high-quality legume forages into these systems offers a cost-effective and sustainable solution for improving livestock productivity. These forages provide more nutritious feed and enhance soil fertility through nitrogen fixation, helping to reduce farmers’ reliance on expensive commercial feeds and fertilizers. Success in the adoption of improved forage varieties hinges on participatory approaches that actively engage farmers in varietal selection and evaluation. Such collaboration leads to better adoption rates and increases on-farm productivity, facilitating the establishment of village-based forage seed enterprises (VBFSEs). These enterprises offer a reliable local seed supply of quality seeds, reducing farmers’ dependency on inconsistent national and international seed suppliers. These initiatives not only improve the production of high-quality forage and livestock productivity but also create opportunities for income diversification, contributing to the livelihoods of smallholder farmers. By fostering collaboration and sustainable practices, policymakers and stakeholders, particularly farmers, can build more resilient agricultural systems that support food security and poverty alleviation in rural communities.
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(This article belongs to the Special Issue Community Seed Banks)
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Open AccessArticle
Phytoplasma Transmission by Seeds in Alfalfa: A Risk for Agricultural Crops and Environment
by
Assunta Bertaccini, Reena Reddy Gandra, Sritej Mateeti and Francesco Pacini
Seeds 2025, 4(3), 39; https://doi.org/10.3390/seeds4030039 - 19 Aug 2025
Cited by 1
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Recent research has demonstrated a presence inside the seeds of several plant species of endophytic bacteria that can directly or indirectly interact with germination and seedling growth. Phytoplasmas are plant-pathogenic bacteria that severely impact the agricultural productivity of several crops, including alfalfa, a
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Recent research has demonstrated a presence inside the seeds of several plant species of endophytic bacteria that can directly or indirectly interact with germination and seedling growth. Phytoplasmas are plant-pathogenic bacteria that severely impact the agricultural productivity of several crops, including alfalfa, a crucial forage crop in which seed transmission was reported. Therefore, understanding the transmission pathways of phytoplasmas is essential for developing effective control strategies. This study investigates the seed transmission of phytoplasmas in alfalfa using seeds collected in Oman in 2002 and kept in a dry environment in a laboratory for 20 years. The sterilized seeds were germinated and grown in agar medium under sterile conditions and transplanted in soil under greenhouse-controlled insect-proof conditions. Utilizing polymerase chain reaction (PCR) and nested PCR followed by RFLP and sequencing analyses, the alfalfa seedlings were screened for the phytoplasma presence. The detection of phytoplasmas in 16SrIII, 16SrV, 16SrX, and 16SrXII groups was achieved, confirming the preliminary results obtained in the 2002 testing of the same seed batches. This finding indicates that seed transmission could be a critical pathway for the spread of these pathogens in alfalfa, considering their survival in seeds for more than 20 years. Further investigations into the mechanisms of seed transmission and the development of resistant alfalfa varieties are essential to enhance the sustainability and productivity of alfalfa cultivation, thereby supporting the agricultural sector’s efforts to meet the growing demand for high-quality forages.
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Open AccessCommunication
Oxidative Stability of the Oil from Camelina (Camelina sativa L.) Seeds: Effects of Ascorbyl Palmitate Concentrations
by
Adriana Slavova-Kazakova, Marina Marcheva, Sabina Taneva and Svetlana Momchilova
Seeds 2025, 4(3), 38; https://doi.org/10.3390/seeds4030038 - 13 Aug 2025
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Camelina (Camelina sativa L.) is a valuable source of seed oil, which contains above 30% of essential omega-3 fatty acid (alpha-linolenic acid, 18:3). On the one hand, this high content of linolenic acid is healthy and hence preferable, but on the other
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Camelina (Camelina sativa L.) is a valuable source of seed oil, which contains above 30% of essential omega-3 fatty acid (alpha-linolenic acid, 18:3). On the one hand, this high content of linolenic acid is healthy and hence preferable, but on the other hand, highly unsaturated oils are easily deteriorated. The stabilization of such oils with respect to their oxidative changes is a significant problem in oil technology and is directly related to the quality of food, pharmaceutical and cosmetic products. Therefore, the aim of this work was to evaluate the effect of ascorbyl palmitate in various concentrations (0.1–2.0 mM) as an additional antioxidant in camelina seed oil during its autoxidation, by determination of oil induction periods and initial rates of oxidation. The results revealed that the added ascorbyl palmitate caused a decrease in oxidation rate, but in terms of oil stability, opposite effects were observed depending on its concentration. Thus, at low levels (0.1–0.2 mM), ascorbyl palmitate had a pro-oxidant effect and the induction period decreased; no effect was observed in its presence of 1.0 mM, whereas 2.0 mM ensured a much higher protective effect. Rosmarinic acid as an individual antioxidant (at 0.2 mM) increased the stability of camelina oil, while in a mixture (1:1) with ascorbyl palmitate at the same concentration, its effect/activity was significantly reduced.
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Open AccessArticle
Osmopriming Increases Seed Germination of Amaranthus cruentus (L.)
by
Arnaud Busquère, Dominique Lefebvre, Patrice Galaup, Lucas Tricoulet, Charline Musset, Eric Lacroux and Othmane Merah
Seeds 2025, 4(3), 37; https://doi.org/10.3390/seeds4030037 - 12 Aug 2025
Cited by 2
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Amaranth is considered a gluten-free, protein-rich pseudocereal. However, seed dormancy affects the germination rate and production. The aim of this study was to investigate the effects of osmopriming, hydropriming, priming with Algal and chia-seed extract biostimulants, scarification, and different combinations of them on
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Amaranth is considered a gluten-free, protein-rich pseudocereal. However, seed dormancy affects the germination rate and production. The aim of this study was to investigate the effects of osmopriming, hydropriming, priming with Algal and chia-seed extract biostimulants, scarification, and different combinations of them on seed germination. The results showed that hydropriming, osmopriming, (at least by 13%), and speed (two days earlier) of germination compared to the control. The same trend was observed, to a lesser extent, for priming with a biostimulant. The production of osmopriming has recently started in France. However, seed priming offers a promising solution to overcome the lack of germination. The aim of this study was to test several priming methods and their impact on amaranth seed germination. An imbibition curve was first established and showed that the first two germination phases were reached at 12 h after imbibition. Duration had no effect on germination compared to the control. In contrast, increasing the rate measurement of polyphenol oxidase (PPO) activity revealed a peak during the first few hours. The largest peak was observed for this. These results suggest growing amaranth by increasing the germination rate.
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Open AccessReview
Transforming By-Products into Functional Resources: The Potential of Cucurbitaceae Family Seeds in Cosmetics
by
Carla Sousa, Carla Guimarães Moutinho, Márcia Carvalho, Carla Matos and Ana Ferreira Vinha
Seeds 2025, 4(3), 36; https://doi.org/10.3390/seeds4030036 - 7 Aug 2025
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Seeds of Cucurbitaceae crops represent a promising yet underexplored source of bioactive compounds with potential applications beyond nutrition, particularly in the cosmetics industry. This review examines the seeds of Citrullus lanatus (watermelon), Cucumis melo (melon), and Cucurbita pepo (pumpkin), focusing on their biochemical
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Seeds of Cucurbitaceae crops represent a promising yet underexplored source of bioactive compounds with potential applications beyond nutrition, particularly in the cosmetics industry. This review examines the seeds of Citrullus lanatus (watermelon), Cucumis melo (melon), and Cucurbita pepo (pumpkin), focusing on their biochemical composition and evaluating their functional value in natural cosmetic development. Although these fruits are widely consumed, industrial processing generates substantial seed by-products that are often discarded. These seeds are rich in polyunsaturated fatty acids, proteins, carbohydrates, and phytochemicals, positioning them as sustainable raw materials for value-added applications. The incorporation of seed-derived extracts into cosmetic formulations offers multiple skin and hair benefits, including antioxidant activity, hydration, and support in managing conditions such as hyperpigmentation, acne, and psoriasis. They also contribute to hair care by improving oil balance, reducing frizz, and enhancing strand nourishment. However, challenges such as environmental instability and low dermal permeability of seed oils have prompted interest in nanoencapsulation technologies to improve delivery, stability, and efficacy. This review summarizes current scientific findings and highlights the potential of Cucurbitaceae seeds as innovative and sustainable ingredients for cosmetic and personal care applications.
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