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Viruses, Volume 9, Issue 9

2017 September - 28 articles

Cover Story: In the emerging era of biological therapies, renewed hope comes hand-in-hand with new challenges in understanding the pharmacokinetic properties of oncolytic viruses, and combinations thereof. Our ability to predict and manipulate the complex interplay between viral agents and the patient’s immune system will be crucial for the clinical success of these therapies. Mathematical modeling is expected to play a key role in such predictions and we hereby review the state-of-the-art of the field. View this paper
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Articles (28)

  • Article
  • Open Access
23 Citations
7,878 Views
23 Pages

PERK Signal-Modulated Protein Translation Promotes the Survivability of Dengue 2 Virus-Infected Mosquito Cells and Extends Viral Replication

  • Jiun-Nan Hou,
  • Tien-Huang Chen,
  • Yi-Hsuan Chiang,
  • Jing-Yun Peng,
  • Tsong-Han Yang,
  • Chih-Chieh Cheng,
  • Eny Sofiyatun,
  • Cheng-Hsun Chiu,
  • Chuan Chiang-Ni and
  • Wei-June Chen

20 September 2017

Survival of mosquitoes from dengue virus (DENV) infection is a prerequisite of viral transmission to the host. This study aimed to see how mosquito cells can survive the infection during prosperous replication of the virus. In C6/36 cells, global pro...

(This article belongs to the Special Issue Viral Subversion of Transcriptional Control)
  • Review
  • Open Access
90 Citations
19,412 Views
21 Pages

19 September 2017

Human papillomaviruses (HPV) are the causative agents of cervical cancer and are also associated with other genital malignancies, as well as an increasing number of head and neck cancers. HPVs have evolved their life cycle to contend with the differe...

(This article belongs to the Special Issue Expert Views on HPV Infection)
  • Review
  • Open Access
82 Citations
15,213 Views
21 Pages

Geminiviruses and Plant Hosts: A Closer Examination of the Molecular Arms Race

  • Shunmugiah V. Ramesh,
  • Pranav P. Sahu,
  • Manoj Prasad,
  • Shelly Praveen and
  • Hanu R. Pappu

15 September 2017

Geminiviruses are plant-infecting viruses characterized by a single-stranded DNA (ssDNA) genome. Geminivirus-derived proteins are multifunctional and effective regulators in modulating the host cellular processes resulting in successful infection. Vi...

(This article belongs to the Special Issue Geminiviruses)
  • Article
  • Open Access
4 Citations
5,716 Views
12 Pages

A Recombinant HAV Expressing a Neutralization Epitope of HEV Induces Immune Response against HAV and HEV in Mice

  • Kui Xiang,
  • Yuri Kusov,
  • Guan Ying,
  • Wang Yan,
  • Yi Shan,
  • Wu Jinyuan,
  • Yin Na,
  • Zhou Yan,
  • Li Hongjun and
  • Sun Maosheng

15 September 2017

Hepatitis A virus (HAV) and hepatitis E virus (HEV) are causative agents of acute viral hepatitis transmitted via the fecal–oral route. Both viruses place a heavy burden on the public health and economy of developing countries. To test the possibilit...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Article
  • Open Access
1 Citations
4,922 Views
13 Pages

LEDGF/p75 Deficiency Increases Deletions at the HIV-1 cDNA Ends

  • Murilo T. D. Bueno,
  • Daniel Reyes and
  • Manuel Llano

15 September 2017

Processing of unintegrated linear HIV-1 cDNA by the host DNA repair system results in its degradation and/or circularization. As a consequence, deficient viral cDNA integration generally leads to an increase in the levels of HIV-1 cDNA circles contai...

(This article belongs to the Special Issue Viruses and the DNA Damage Response)
  • Article
  • Open Access
35 Citations
8,417 Views
12 Pages

Identification of a Novel Inhibitor against Middle East Respiratory Syndrome Coronavirus

  • Yaping Sun,
  • Huaidong Zhang,
  • Jian Shi,
  • Zhe Zhang and
  • Rui Gong

14 September 2017

The Middle East respiratory syndrome coronavirus (MERS-CoV) was first isolated in 2012, and circulated worldwide with high mortality. The continual outbreaks of MERS-CoV highlight the importance of developing antiviral therapeutics. Here, we rational...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
22 Citations
8,046 Views
13 Pages

Engineered Disease Resistance in Cotton Using RNA-Interference to Knock down Cotton leaf curl Kokhran virus-Burewala and Cotton leaf curl Multan betasatellite Expression

  • Aftab Ahmad,
  • Muhammad Zia-Ur-Rehman,
  • Usman Hameed,
  • Abdul Qayyum Rao,
  • Ammara Ahad,
  • Aneela Yasmeen,
  • Faheem Akram,
  • Kamran Shahzad Bajwa,
  • Jodi Scheffler and
  • Judith K. Brown
  • + 5 authors

14 September 2017

Cotton leaf curl virus disease (CLCuD) is caused by a suite of whitefly-transmitted begomovirus species and strains, resulting in extensive losses annually in India and Pakistan. RNA-interference (RNAi) is a proven technology used for knockdown of ge...

(This article belongs to the Special Issue Geminiviruses)
  • Article
  • Open Access
69 Citations
12,496 Views
19 Pages

Characterization of vB_SauM-fRuSau02, a Twort-Like Bacteriophage Isolated from a Therapeutic Phage Cocktail

  • Katarzyna Leskinen,
  • Henni Tuomala,
  • Anu Wicklund,
  • Jenni Horsma-Heikkinen,
  • Pentti Kuusela,
  • Mikael Skurnik and
  • Saija Kiljunen

14 September 2017

Staphylococcus aureus is a commensal and pathogenic bacterium that causes infections in humans and animals. It is a major cause of nosocomial infections worldwide. Due to increasing prevalence of multidrug resistance, alternative methods to eradicate...

(This article belongs to the Special Issue Hurdles for Phage Therapy (PT) to Become a Reality)
  • Review
  • Open Access
128 Citations
18,364 Views
16 Pages

12 September 2017

Human papillomavirus (HPV) infection is a causative factor for various cancers of the anogenital region and oropharynx, and is supposed to play an important cofactor role for skin carcinogenesis. Evasion from immunosurveillance favors viral persisten...

(This article belongs to the Special Issue Expert Views on HPV Infection)
  • Article
  • Open Access
45 Citations
7,429 Views
17 Pages

Analysis of Class I Major Histocompatibility Complex Gene Transcription in Human Tumors Caused by Human Papillomavirus Infection

  • Steven F. Gameiro,
  • Ali Zhang,
  • Farhad Ghasemi,
  • John W. Barrett,
  • Anthony C. Nichols and
  • Joe S. Mymryk

10 September 2017

Oncoproteins from high-risk human papillomaviruses (HPV) downregulate the transcription of the class I major histocompatibility complex (MHC-I) antigen presentation apparatus in tissue culture model systems. This could allow infected or transformed c...

(This article belongs to the Special Issue Viral Subversion of Transcriptional Control)
  • Article
  • Open Access
14 Citations
8,649 Views
16 Pages

Re-Assembly and Analysis of an Ancient Variola Virus Genome

  • Chad Smithson,
  • Jacob Imbery and
  • Chris Upton

8 September 2017

We report a major improvement to the assembly of published short read sequencing data from an ancient variola virus (VARV) genome by the removal of contig-capping sequencing tags and manual searches for gap-spanning reads. The new assembly, together...

(This article belongs to the Special Issue Smallpox and Emerging Zoonotic Orthopoxviruses: What Is Coming Next?)
  • Article
  • Open Access
34 Citations
7,881 Views
18 Pages

Ultrastructural Characterization of Membrane Rearrangements Induced by Porcine Epidemic Diarrhea Virus Infection

  • Xingdong Zhou,
  • Yingying Cong,
  • Tineke Veenendaal,
  • Judith Klumperman,
  • Dongfang Shi,
  • Muriel Mari and
  • Fulvio Reggiori

5 September 2017

The porcine epidemic diarrhea virus (PEDV) is a coronavirus (CoV) belonging to the α-CoV genus and it causes high mortality in infected sucking piglets, resulting in substantial losses in the farming industry. CoV trigger a drastic reorganization of...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
39 Citations
8,872 Views
12 Pages

4 September 2017

RNA silencing has an important role in defending against virus infection in plants. Plants with the deficiency of RNA silencing components often show enhanced susceptibility to viral infections. RNA-dependent RNA polymerase (RDRs) mediated-antiviral...

(This article belongs to the Special Issue Geminiviruses)
  • Article
  • Open Access
27 Citations
6,515 Views
17 Pages

Using Next Generation Sequencing to Identify and Quantify the Genetic Composition of Resistance-Breaking Commercial Isolates of Cydia pomonella Granulovirus

  • Gianpiero Gueli Alletti,
  • Annette J. Sauer,
  • Birgit Weihrauch,
  • Eva Fritsch,
  • Karin Undorf-Spahn,
  • Jörg T. Wennmann and
  • Johannes A. Jehle

4 September 2017

The use of Cydia pomonella granulovirus (CpGV) isolates as biological control agents of codling moth (CM) larvae is important in organic and integrated pome fruit production worldwide. The commercially available isolates CpGV-0006, CpGV-R5, and CpGV-...

(This article belongs to the Section Invertebrate Viruses)
  • Review
  • Open Access
70 Citations
10,773 Views
17 Pages

2 September 2017

Multicellular organisms have evolved multiple genetically programmed cell death pathways that are essential for homeostasis. The finding that many viruses encode cell death inhibitors suggested that cellular suicide also functions as a first line of...

(This article belongs to the Special Issue Viral Infection and Apoptosis)
  • Review
  • Open Access
102 Citations
10,837 Views
18 Pages

Epigenetic Alterations in Human Papillomavirus-Associated Cancers

  • David Soto,
  • Christine Song and
  • Margaret E. McLaughlin-Drubin

1 September 2017

Approximately 15–20% of human cancers are caused by viruses, including human papillomaviruses (HPVs). Viruses are obligatory intracellular parasites and encode proteins that reprogram the regulatory networks governing host cellular signaling pathways...

(This article belongs to the Special Issue Expert Views on HPV Infection)
  • Review
  • Open Access
98 Citations
13,747 Views
18 Pages

30 August 2017

Human papillomaviruses (HPVs) cause diseases ranging from benign warts to invasive cancers. HPVs infect epithelial cells and their replication cycle is tightly linked with the differentiation process of the infected keratinocyte. The normal replicati...

(This article belongs to the Special Issue Expert Views on HPV Infection)
  • Review
  • Open Access
54 Citations
11,561 Views
13 Pages

The Mouse Papillomavirus Infection Model

  • Jiafen Hu,
  • Nancy M. Cladel,
  • Lynn R. Budgeon,
  • Karla K. Balogh and
  • Neil D. Christensen

30 August 2017

The mouse papillomavirus (MmuPV1) was first reported in 2011 and has since become a powerful research tool. Through collective efforts from different groups, significant progress has been made in the understanding of molecular, virological, and immun...

(This article belongs to the Special Issue Expert Views on HPV Infection)
  • Article
  • Open Access
13 Citations
4,857 Views
15 Pages

29 August 2017

Defensins are antimicrobial peptides important for mucosal innate immunity. They exhibit a broad spectrum of activity against bacteria, viruses, and fungi. Levels of α-defensins are elevated at the genital mucosa of individuals with sexually transmit...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Review
  • Open Access
73 Citations
13,191 Views
12 Pages

Regulation of Apoptosis during Flavivirus Infection

  • Toru Okamoto,
  • Tatsuya Suzuki,
  • Shinji Kusakabe,
  • Makoto Tokunaga,
  • Junki Hirano,
  • Yuka Miyata and
  • Yoshiharu Matsuura

28 August 2017

Apoptosis is a type of programmed cell death that regulates cellular homeostasis by removing damaged or unnecessary cells. Its importance in host defenses is highlighted by the observation that many viruses evade, obstruct, or subvert apoptosis, ther...

(This article belongs to the Special Issue Viral Infection and Apoptosis)
  • Perspective
  • Open Access
24 Citations
9,402 Views
17 Pages

27 August 2017

Smallpox was the first human disease to be eradicated, through a concerted vaccination campaign led by the World Health Organization. Since its eradication, routine vaccination against smallpox has ceased, leaving the world population susceptible to...

(This article belongs to the Special Issue Smallpox and Emerging Zoonotic Orthopoxviruses: What Is Coming Next?)
  • Review
  • Open Access
80 Citations
13,237 Views
15 Pages

Investigations of Pro- and Anti-Apoptotic Factors Affecting African Swine Fever Virus Replication and Pathogenesis

  • Linda K. Dixon,
  • Pedro J. Sánchez-Cordón,
  • Inmaculada Galindo and
  • Covadonga Alonso

25 August 2017

African swine fever virus (ASFV) is a large DNA virus that replicates predominantly in the cell cytoplasm and is the only member of the Asfarviridae family. The virus causes an acute haemorrhagic fever, African swine fever (ASF), in domestic pigs and...

(This article belongs to the Special Issue Viral Infection and Apoptosis)
  • Article
  • Open Access
6 Citations
8,229 Views
20 Pages

The Enigmatic Origin of Papillomavirus Protein Domains

  • Mikk Puustusmaa,
  • Heleri Kirsip,
  • Kevin Gaston and
  • Aare Abroi

23 August 2017

Almost a century has passed since the discovery of papillomaviruses. A few decades of research have given a wealth of information on the molecular biology of papillomaviruses. Several excellent studies have been performed looking at the long- and sho...

(This article belongs to the Special Issue Expert Views on HPV Infection)
  • Article
  • Open Access
25 Citations
7,385 Views
17 Pages

Opposite Roles of RNase and Kinase Activities of Inositol-Requiring Enzyme 1 (IRE1) on HSV-1 Replication

  • Airong Su,
  • Huanru Wang,
  • Yanlei Li,
  • Xiaohui Wang,
  • Deyan Chen and
  • Zhiwei Wu

23 August 2017

In response to the endoplasmic reticulum (ER) stress induced by herpes simplex virus type 1 (HSV-1) infection, host cells activate the unfolded protein response (UPR) to reduce the protein-folding burden in the ER. The regulation of UPR upon HSV-1 in...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Review
  • Open Access
42 Citations
11,436 Views
20 Pages

The Epidemiology of African Swine Fever in “Nonendemic” Regions of Zambia (1989–2015): Implications for Disease Prevention and Control

  • Edgar Simulundu,
  • Caesar H. Lubaba,
  • Juanita Van Heerden,
  • Masahiro Kajihara,
  • Liywalii Mataa,
  • Herman Moses Chambaro,
  • Yona Sinkala,
  • Samuel Munalula Munjita,
  • Hetron Mweemba Munang’andu and
  • Aaron S. Mweene
  • + 4 authors

23 August 2017

African swine fever (ASF) is a highly contagious and deadly viral hemorrhagic disease of swine. In Zambia, ASF was first reported in 1912 in Eastern Province and is currently believed to be endemic in that province only. Strict quarantine measures im...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
16 Citations
6,719 Views
15 Pages

The Response of Heterotrophic Prokaryote and Viral Communities to Labile Organic Carbon Inputs Is Controlled by the Predator Food Chain Structure

  • Ruth-Anne Sandaa,
  • Bernadette Pree,
  • Aud Larsen,
  • Selina Våge,
  • Birte Töpper,
  • Joachim P. Töpper,
  • Runar Thyrhaug and
  • Tron Frede Thingstad

23 August 2017

Factors controlling the community composition of marine heterotrophic prokaryotes include organic-C, mineral nutrients, predation, and viral lysis. Two mesocosm experiments, performed at an Arctic location and bottom-up manipulated with organic-C, ha...

(This article belongs to the Special Issue Marine Viruses 2016)
  • Review
  • Open Access
31 Citations
11,795 Views
26 Pages

Fighting Cancer with Mathematics and Viruses

  • Daniel N. Santiago,
  • Johannes P. W. Heidbuechel,
  • Wendy M. Kandell,
  • Rachel Walker,
  • Julie Djeu,
  • Christine E. Engeland,
  • Daniel Abate-Daga and
  • Heiko Enderling

23 August 2017

After decades of research, oncolytic virotherapy has recently advanced to clinical application, and currently a multitude of novel agents and combination treatments are being evaluated for cancer therapy. Oncolytic agents preferentially replicate in...

(This article belongs to the Special Issue Mathematical Modeling of Viral Infections)
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Viruses - ISSN 1999-4915