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Viruses, Volume 8, Issue 2

2016 February - 29 articles

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Articles (29)

  • Article
  • Open Access
52 Citations
10,324 Views
16 Pages

Porcine Circovirus 2 Deploys PERK Pathway and GRP78 for Its Enhanced Replication in PK-15 Cells

  • Yingshan Zhou,
  • Baozhu Qi,
  • Yuanxing Gu,
  • Fei Xu,
  • Huahua Du,
  • Xiaoliang Li and
  • Weihuan Fang

20 February 2016

Porcine circovirus type 2 (PCV2) infection induces autophagy and apoptosis. These cellular responses could be connected with endoplasmic reticulum (ER) stress. It remains unknown if PCV2 induces ER stress and if autophagy or apoptosis is primary to P...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
15 Citations
8,019 Views
20 Pages

In Vitro and in Vivo Evaluation of Mutations in the NS Region of Lineage 2 West Nile Virus Associated with Neuroinvasiveness in a Mammalian Model

  • Katalin Szentpáli-Gavallér,
  • Stephanie M. Lim,
  • László Dencső,
  • Krisztián Bányai,
  • Penelope Koraka,
  • Albert D.M.E. Osterhaus,
  • Byron E.E. Martina,
  • Tamás Bakonyi and
  • Ádám Bálint

19 February 2016

West Nile virus (WNV) strains may differ significantly in neuroinvasiveness in vertebrate hosts. In contrast to genetic lineage 1 WNVs, molecular determinants of pathogenic lineage 2 strains have not been experimentally confirmed so far. A full-lengt...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
10 Citations
9,544 Views
16 Pages

Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers

  • Jens Friis-Nielsen,
  • Kristín Rós Kjartansdóttir,
  • Sarah Mollerup,
  • Maria Asplund,
  • Tobias Mourier,
  • Randi Holm Jensen,
  • Thomas Arn Hansen,
  • Alba Rey-Iglesia,
  • Stine Raith Richter and
  • Søren Brunak
  • + 11 authors

19 February 2016

Virus discovery from high throughput sequencing data often follows a bottom-up approach where taxonomic annotation takes place prior to association to disease. Albeit effective in some cases, the approach fails to detect novel pathogens and remote va...

(This article belongs to the Special Issue Next Generation Sequencing: New Developments and Discoveries in Virology)
  • Article
  • Open Access
31 Citations
8,056 Views
12 Pages

A Toolbox for Herpesvirus miRNA Research: Construction of a Complete Set of KSHV miRNA Deletion Mutants

  • Vaibhav Jain,
  • Karlie Plaisance-Bonstaff,
  • Rajnikumar Sangani,
  • Curtis Lanier,
  • Alexander Dolce,
  • Jianhong Hu,
  • Kevin Brulois,
  • Irina Haecker,
  • Peter Turner and
  • Brian Krueger
  • + 1 author

19 February 2016

Kaposi’s sarcoma-associated herpesvirus (KSHV) encodes 12 viral microRNAs (miRNAs) that are expressed during latency. Research into KSHV miRNA function has suffered from a lack of genetic systems to study viral miRNA mutations in the context of the v...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
5 Citations
6,122 Views
14 Pages

18 February 2016

Saffold Virus (SAFV) is a human cardiovirus that has been suggested to cause severe infection of the central nervous system (CNS). Compared to a similar virus, Theiler’s murine encephalomyelitis virus (TMEV), SAFV has a truncated Leader (L) protein,...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
11 Citations
7,025 Views
18 Pages

18 February 2016

Infectious salmon anaemia virus (ISAV) is an orthomyxovirus infecting salmonid fish. The virus is adapted to low temperature and has a replication optimum between 10–15 °C. In this study the subcellular localization and protein interactions for the p...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
18 Citations
7,497 Views
17 Pages

16 February 2016

A previous proteomic screen in our laboratory identified nuclear factor 45 (NF45) and nuclear factor 90 (NF90) as potential cellular factors involved in human immunodeficiency virus type 1 (HIV-1) replication. Both are RNA binding proteins that regul...

(This article belongs to the Section Animal Viruses)
  • Review
  • Open Access
19 Citations
8,115 Views
17 Pages

Structural Proteomics of Herpesviruses

  • Baptiste Leroy,
  • Laurent Gillet,
  • Alain Vanderplasschen and
  • Ruddy Wattiez

12 February 2016

Herpesviruses are highly prevalent viruses associated with numerous pathologies both in animal and human populations. Until now, most of the strategies used to prevent or to cure these infections have been unsuccessful because these viruses have deve...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
26 Citations
7,909 Views
7 Pages

Infectious Mononucleosis Triggers Generation of IgG Auto-Antibodies against Native Myelin Oligodendrocyte Glycoprotein

  • Kristina Kakalacheva,
  • Stephan Regenass,
  • Silke Wiesmayr,
  • Tarik Azzi,
  • Christoph Berger,
  • Russell C. Dale,
  • Fabienne Brilot,
  • Christian Münz,
  • Kevin Rostasy and
  • Jan D. Lünemann
  • + 1 author

12 February 2016

A history of infectious mononucleosis (IM), symptomatic primary infection with the Epstein Barr virus, is associated with the development of autoimmune diseases and increases the risk to develop multiple sclerosis. Here, we hypothesized that immune a...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Article
  • Open Access
15 Citations
5,861 Views
10 Pages

Genetic Variability of HIV-1 for Drug Resistance Assay Development

  • Dana S. Clutter,
  • Patricia Rojas Sánchez,
  • Soo-Yon Rhee and
  • Robert W. Shafer

11 February 2016

A hybridization-based point-of-care (POC) assay for HIV-1 drug resistance would be useful in low- and middle-income countries (LMICs) where resistance testing is not routinely available. The major obstacle in developing such an assay is the extreme g...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Article
  • Open Access
34 Citations
8,317 Views
12 Pages

Suppressive Effects of the Site 1 Protease (S1P) Inhibitor, PF-429242, on Dengue Virus Propagation

  • Leo Uchida,
  • Shuzo Urata,
  • Gianne Eduard L. Ulanday,
  • Yuki Takamatsu,
  • Jiro Yasuda,
  • Kouichi Morita and
  • Daisuke Hayasaka

10 February 2016

Dengue virus (DENV) infection causes one of the most widespread mosquito-borne diseases in the world. Despite the great need, effective vaccines and practical antiviral therapies are still under development. Intracellular lipid levels are regulated b...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Review
  • Open Access
79 Citations
13,636 Views
10 Pages

8 February 2016

The list of recently discovered gastrointestinal viruses is expanding rapidly. Whether these agents are actually involved in a disease such as diarrhea is the essential question, yet difficult to answer. In this review a summary of all viruses found...

  • Review
  • Open Access
16 Citations
8,872 Views
15 Pages

5 February 2016

Large-scale assays, such as microarrays, next-generation sequencing and various “omics” technologies, have explored multiple aspects of the immune response following virus infection, often from a public health perspective. Yet a lack of similar data...

(This article belongs to the Special Issue Oncolytic Viruses)
  • Article
  • Open Access
13 Citations
8,495 Views
14 Pages

A KDEL Retrieval System for ER-Golgi Transport of Japanese Encephalitis Viral Particles

  • Robert YL Wang,
  • Yu-Jen Wu,
  • Han-Shan Chen and
  • Chih-Jung Chen

5 February 2016

Evidence has emerged that RNA viruses utilize the host secretory pathway for processing and trafficking mature viral particles and for exiting the infected cells. Upon completing the complex assembly process, the viral particles take advantage of the...

(This article belongs to the Special Issue Host Membranes and the Viral Infection Cycle)
  • Review
  • Open Access
40 Citations
11,311 Views
9 Pages

To Infection and Beyond: The Multi-Pronged Anti-Cancer Mechanisms of Oncolytic Viruses

  • Kevin A. Cassady,
  • Kellie B. Haworth,
  • Josh Jackson,
  • James M. Markert and
  • Timothy P. Cripe

4 February 2016

Over the past 1–2 decades we have witnessed a resurgence of efforts to therapeutically exploit the attributes of lytic viruses to infect and kill tumor cells while sparing normal cells. We now appreciate that the utility of viruses for treating cance...

(This article belongs to the Special Issue Oncolytic Viruses)
  • Article
  • Open Access
5 Citations
8,118 Views
27 Pages

Generation of Recombinant Polioviruses Harboring RNA Affinity Tags in the 5′ and 3′ Noncoding Regions of Genomic RNAs

  • Dylan Flather,
  • Andrea L. Cathcart,
  • Casey Cruz,
  • Eric Baggs,
  • Tuan Ngo,
  • Paul D. Gershon and
  • Bert L. Semler

4 February 2016

Despite being intensely studied for more than 50 years, a complete understanding of the enterovirus replication cycle remains elusive. Specifically, only a handful of cellular proteins have been shown to be involved in the RNA replication cycle of th...

(This article belongs to the Special Issue Recent Progress in Enterovirus Research)
  • Review
  • Open Access
19 Citations
7,929 Views
17 Pages

Genetic Markers of the Host in Persons Living with HTLV-1, HIV and HCV Infections

  • Tatiane Assone,
  • Arthur Paiva,
  • Luiz Augusto M. Fonseca and
  • Jorge Casseb

3 February 2016

Human T-cell leukemia virus type 1 (HTLV-1), hepatitis C virus (HCV) and human immunodeficiency virus type 1 (HIV-1) are prevalent worldwide, and share similar means of transmission. These infections may influence each other in evolution and outcome,...

(This article belongs to the Special Issue Recent Advances in HTLV Research 2015)
  • Review
  • Open Access
83 Citations
10,876 Views
9 Pages

Mother-to-Child Transmission of HTLV-1 Epidemiological Aspects, Mechanisms and Determinants of Mother-to-Child Transmission

  • Florent Percher,
  • Patricia Jeannin,
  • Sandra Martin-Latil,
  • Antoine Gessain,
  • Philippe V. Afonso,
  • Aurore Vidy-Roche and
  • Pierre-Emmanuel Ceccaldi

3 February 2016

Human T-cell Lymphotropic Virus type 1 (HTLV-1) is a human retrovirus that infects at least 5–10 million people worldwide, and is the etiological agent of a lymphoproliferative malignancy; Adult T-cell Leukemia/Lymphoma (ATLL); and a chronic neuromye...

(This article belongs to the Special Issue Recent Advances in HTLV Research 2015)
  • Article
  • Open Access
18 Citations
6,813 Views
10 Pages

3 February 2016

Although the number of human T-cell leukemia virus type-I (HTLV-I)-infected individuals in the world has been estimated at over 10 million, no prophylaxis vaccines against HTLV-I infection are available. In this study, we took a new approach for esta...

(This article belongs to the Special Issue Recent Advances in HTLV Research 2015)
  • Review
  • Open Access
48 Citations
8,035 Views
12 Pages

2 February 2016

Human T-cell leukemia virus type 1 (HTLV-1) causes adult T-cell leukemia (ATL) and chronic inflammatory diseases. HTLV-1 bZIP factor (HBZ) is transcribed as an antisense transcript of the HTLV-1 provirus. Among the HTLV-1-encoded viral genes, HBZ is...

(This article belongs to the Special Issue Recent Advances in HTLV Research 2015)
  • Article
  • Open Access
53 Citations
9,709 Views
13 Pages

Metagenomic Analysis of Virioplankton of the Subtropical Jiulong River Estuary, China

  • Lanlan Cai,
  • Rui Zhang,
  • Ying He,
  • Xiaoyuan Feng and
  • Nianzhi Jiao

2 February 2016

Viruses are the most abundant biological entities in the oceans, and encompass a significant reservoir of genetic diversity. However, little is known about their biodiversity in estuary environments, which represent a highly dynamic and potentially m...

(This article belongs to the Special Issue Next Generation Sequencing: New Developments and Discoveries in Virology)
  • Article
  • Open Access
41 Citations
9,675 Views
16 Pages

Begomovirus-Associated Satellite DNA Diversity Captured Through Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae)

  • Karyna Rosario,
  • Christian Marr,
  • Arvind Varsani,
  • Simona Kraberger,
  • Daisy Stainton,
  • Enrique Moriones,
  • Jane E. Polston and
  • Mya Breitbart

2 February 2016

Monopartite begomoviruses (Geminiviridae), which are whitefly-transmitted single-stranded DNA viruses known for causing devastating crop diseases, are often associated with satellite DNAs. Since begomovirus acquisition or exchange of satellite DNAs m...

(This article belongs to the Section Viruses of Plants, Fungi and Protozoa)
  • Article
  • Open Access
13 Citations
8,544 Views
20 Pages

Adenovirus E1A/E1B Transformed Amniotic Fluid Cells Support Human Cytomegalovirus Replication

  • Natascha Krömmelbein,
  • Lüder Wiebusch,
  • Gudrun Schiedner,
  • Nicole Büscher,
  • Caroline Sauer,
  • Luise Florin,
  • Elisabeth Sehn,
  • Uwe Wolfrum and
  • Bodo Plachter

2 February 2016

The human cytomegalovirus (HCMV) replicates to high titers in primary human fibroblast cell cultures. A variety of primary human cells and some tumor-derived cell lines do also support permissive HCMV replication, yet at low levels. Cell lines establ...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
12 Citations
7,094 Views
11 Pages

Pandemic Influenza A (H1N1) Virus Infection Increases Apoptosis and HIV-1 Replication in HIV-1 Infected Jurkat Cells

  • Xue Wang,
  • Jiying Tan,
  • Santanu Biswas,
  • Jiangqin Zhao,
  • Krishnakumar Devadas,
  • Zhiping Ye and
  • Indira Hewlett

2 February 2016

Influenza virus infection has a significant impact on public health, since it is a major cause of morbidity and mortality. It is not well-known whether influenza virus infection affects cell death and human immunodeficiency virus (HIV)-1 replication...

  • Review
  • Open Access
64 Citations
17,740 Views
22 Pages

Molecular Studies of HTLV-1 Replication: An Update

  • Jessica L. Martin,
  • José O. Maldonado,
  • Joachim D. Mueller,
  • Wei Zhang and
  • Louis M. Mansky

27 January 2016

Human T-cell leukemia virus type 1 (HTLV-1) was the first human retrovirus discovered. Studies on HTLV-1 have been instrumental for our understanding of the molecular pathology of virus-induced cancers. HTLV-1 is the etiological agent of an adult T-c...

(This article belongs to the Special Issue Recent Advances in HTLV Research 2015)
  • Review
  • Open Access
38 Citations
13,116 Views
13 Pages

The Autophagic Machinery in Enterovirus Infection

  • Jeffrey K. F. Lai,
  • I-Ching Sam and
  • Yoke Fun Chan

27 January 2016

The Enterovirus genus of the Picornaviridae family comprises many important human pathogens, including polioviruses, rhinovirus, enterovirus A71, and enterovirus D68. They cause a wide variety of diseases, ranging from mild to severe life-threatening...

(This article belongs to the Special Issue Recent Progress in Enterovirus Research)
  • Editorial
  • Open Access
37 Citations
11,633 Views
5 Pages

26 January 2016

Despite a relatively long search for the origin of ebolaviruses, their reservoirs remain elusive. Researchers might have to consider testing alternative hypotheses about how these viruses persist and emerge to advance ebolavirus research. This articl...

(This article belongs to the Collection Advances in Ebolavirus, Marburgvirus, and Cuevavirus Research)
  • Article
  • Open Access
9 Citations
10,096 Views
16 Pages

HPV Population Profiling in Healthy Men by Next-Generation Deep Sequencing Coupled with HPV-QUEST

  • Li Yin,
  • Jin Yao,
  • Kaifen Chang,
  • Brent P. Gardner,
  • Fahong Yu,
  • Anna R. Giuliano and
  • Maureen M. Goodenow

25 January 2016

Multiple-type human papillomaviruses (HPV) infection presents a greater risk for persistence in asymptomatic individuals and may accelerate cancer development. To extend the scope of HPV types defined by probe-based assays, multiplexing deep sequenci...

(This article belongs to the Special Issue Next Generation Sequencing: New Developments and Discoveries in Virology)
  • Article
  • Open Access
70 Citations
10,568 Views
11 Pages

Experimental Inoculation of Egyptian Fruit Bats (Rousettus aegyptiacus) with Ebola Virus

  • Janusz T. Paweska,
  • Nadia Storm,
  • Antoinette A. Grobbelaar,
  • Wanda Markotter,
  • Alan Kemp and
  • Petrus Jansen van Vuren

22 January 2016

Colonized Egyptian fruit bats (Rousettus aegyptiacus), originating in South Africa, were inoculated subcutaneously with Ebola virus (EBOV). No overt signs of morbidity, mortality, or gross lesions were noted. Bats seroconverted by Day 10–16 post inoc...

(This article belongs to the Collection Advances in Ebolavirus, Marburgvirus, and Cuevavirus Research)
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Viruses - ISSN 1999-4915