Skip to Content

Biology

Biology is an international, peer-reviewed, open access journal of biological sciences published semimonthly online by MDPI. The Spanish Society for Nitrogen Fixation (SEFIN) and Federation of European Laboratory Animal Science Associations (FELASA) are affiliated with Biology and their members receive discounts on the article processing charges.

Get Alerted

Add your email address to receive forthcoming issues of this journal.

All Articles (10,197)

This study evaluated the effects of dietary SYNSEA Premium postbiotics on growth, immunity, disease resistance, intestinal microbiota, and host metabolism in Asian seabass (Lates calcarifer). Fish were fed a control diet or diets supplemented with heat-killed Lactiplantibacillus plantarum LP28, L. plantarum LP1008, and Bacillus subtilis at 108 (LSP) or 109 (HSP) cells kg−1 diet for 56 days. Postbiotic supplementation did not significantly affect growth performance, feed efficiency, production, condition factor, or dorsal muscle composition, but significantly improved survival. Fish receiving postbiotics also exhibited higher survival following Vibrio alginolyticus and iridovirus challenges. These protective effects were accompanied by enhanced superoxide dismutase, phagocytic, and lysozyme activities and modulation of immune-related genes, including tgf-β1, tnf, ifn-γ1, c3, and mx. Exploratory microbiome and metabolome analyses, which were restricted to the control and LSP groups, identified differences in the relative abundance of specific intestinal microbial taxa and associations between microbial composition and host metabolic profiles. The LSP group showed lower relative abundances of potential pathogens such as Salmonella enterica, Lactococcus garvieae, and Staphylococcus warneri, although the overall microbial community structure did not differ significantly between groups. Metabolomic analysis of the LSP group further showed changes in D-glucose, pentose phosphate pathway intermediates, reduced glutathione, CoA, and 2-methylacetoacetyl-CoA relative to the control. Collectively, SYNSEA Premium improved survival, immune responses, and resistance to bacterial and viral infections without significantly affecting growth performance, while exploratory omics analysis of the LSP treatment identified associated microbial and metabolic changes.

Biology

11 September 2026

Kaplan–Meier survival curves of Asian seabass fed the control diet or diets supplemented with low- or high-dose postbiotics (LSP and HSP, respectively) for 56 days and subsequently challenged with Vibrio alginolyticus at 4 × 106 CFU (g weight)−1. An unchallenged control group was included for comparison. The challenge experiment was conducted with three replicate tanks per treatment, with 10 fish in each tank. Survival was monitored for 7 days post-infection. Differences in survival distributions among groups were evaluated using the log-rank test (p < 0.05).

Doxorubicin (Dox)-induced cardiotoxicity (DIC) is a major clinical challenge in cancer therapy. Camel milk exosomes (CMEs) have been applied in anti-tumor treatments as they have a variety of effects, including on inflammation, oxidative stress, metastasis, and apoptosis. However, their role in DIC treatment remains incompletely understood. This research was designed to evaluate the protection provided by CMEs against DIC. The DIC mice were treated with Dox intraperitoneally and divided into a model group and groups treated with different doses of CMEs. Dox-induced H9c2 cell injury was also established and divided into a model group and groups treated with different concentrations of CMEs. The evaluation parameters in vitro included H9c2 cell viability, reactive oxygen species (ROS), mitochondria, and apoptotic cells. The apoptosis and autophagy markers, as well as the nuclear factor kappa B (NF-κB) and mitogen-activated protein kinase (MAPK) pathways, were assessed via Western blotting both in vivo and in vitro. In addition, transcriptome sequencing of cardiac tissue was also applied to investigate the related mechanisms. Our results indicate that CMEs significantly attenuated the cell viability reduction, apoptosis, and ROS production in H9c2 cells caused by Dox. CMEs also regulated autophagy, inhibited apoptosis, and inhibited the NF-κB and MAPK pathways. In conclusion, our findings demonstrate that CMEs exert a cardiac protective effect against DIC by inhibiting apoptosis and regulating autophagy via NF-κB and MAPK signaling pathways.

Biology

11 September 2026

Identification of CME: (A) TEM image of isolated CMEs; (B) size distribution of CMEs; (C) WB bands of TSG101, CD81, CD63, and Calnexin; (D) co-localization of PKH26-labeled CMEs and CD81 in H9c2 cells.

Beneath the Surface: Aquatic Models Illuminate Host–Microbe Interactions

  • Kathryn B. Lorbacher,
  • Tram Le and
  • Karen Mruk
  • + 1 author

Microbial outcomes emerge from dynamic interactions among host defenses, microbial traits, and environmental context. This narrative review examines aquatic host–microbe systems, with emphasis on zebrafish and Vibrio species, as experimentally tractable aquatic models for understanding how interactions shift across a spectrum from mutualism to pathogenesis. We first define major aquatic invertebrate and vertebrate models, highlighting how each balances scalability, genetic accessibility, physiological complexity, and translational relevance. We then use Vibrio species as a framework for moving beyond the pathogen versus non-pathogen classification, emphasizing conditional pathogenicity, host-dependent outcomes, and shared molecular toolkits between symbionts and pathogens. Finally, we highlight host responses including barriers and immunity. Aquatic models reveal that disease results from context-dependent regulation of both host and microbial programs. By integrating the diversity of aquatic models, aquatic host–microbe research presents a unique opportunity to define the continuum of outcomes from mutualism to pathogenesis.

Biology

11 September 2026

Conceptualization of Vibrio species range from pathogens to mutualists. Many Vibrio are not isolated to a single category on the pathogen vs. non-pathogen spectrum. Position of each baris based on the reviewed literature rather than representing a calculated value, formal metric, or quantitative disease severity score. Bar length reflects the extent of evidence-based variation for each species. Longer bars indicate substantial behavioral shifts across hosts or conditions, whereas shorter bars represent a narrower documented range rather than a fixed position. Schematic was made using Adobe Illustrator 2026.

Background/Objectives: Tumor heterogeneity is reflected in cell composition, molecular states, spatial distribution, and microenvironment interactions. Spatial transcriptomics can map in situ expression and cell states but cannot fully explain upstream regulation, while spatial epigenomics provides complementary evidence such as chromatin accessibility, histone modifications, and deoxyribonucleic acid (DNA) methylation. This review summarizes the applications of spatial multi-omics and deep learning in prioritizing candidate drug targets in tumors. Methods: We reviewed spatial transcriptomics, spatial epigenomics, and combined sequencing technologies, with a focus on how deep learning supports the analysis and integration of spatial multi-omics data for candidate-target prioritization. Results: Deep learning facilitates the detection of abnormal regions, deciphering of cell origins, integration across samples, inference of cell–cell communication, and combination of imaging with omics data. Spatial multi-omics studies provide therapeutic insights into malignant cells, immunosuppression, stromal and vascular remodeling, and invasion and metastasis niches. Based on these applications, candidate targets can be evaluated in a layered manner according to spatial specificity, cell origin, regulatory consistency, reproducibility across patients, functional dependency, disease relevance, and druggability. Conclusions: Spatial multi-omics and deep learning can enhance the systematic and interpretable selection of candidate targets. However, computational associations cannot replace functional validation. Candidate targets still require verification through gene perturbation, drug sensitivity assays, organoids, animal models, and clinical cohorts to confirm their therapeutic potential.

Biology

11 September 2026

Deep learning-assisted framework for prioritizing candidate drug targets using spatial multi-omics. The workflow proceeds from spatial multi-omics acquisition and deep-learning integration to treatment-related spatial-neighborhood identification, evidence-based candidate-target prioritization, and subsequent functional, pharmacological, and translational validation. Deep learning integrates spatial features but does not independently establish validated drug targets. Note: In Step 1, the color gradient represents differences in the spatial distribution of molecular signals; in Step 2, different colors to distinguish the various components shown in the diagram; in Step 3, colored nodes represent different stages of feature integration within the deep-learning network; and in Step 4, differently colored cells represent distinct cell populations. Other colors are used mainly for visual differentiation and do not convey additional quantitative information. Abbreviations: ATAC, assay for transposase-accessible chromatin; Ac, acetylation.

Highly Accessed Articles

News & Conferences

Latest Issues

Open for Submission

Journal Sections

Advances in Wildlife Conservation and Habitat Management in the Anthropocene
Reprint

Advances in Wildlife Conservation and Habitat Management in the Anthropocene

Editors: Yiannis G. Zevgolis, Panayiotis G. Dimitrakopoulos
The Biology, Ecology, and Management of Plant Pests
Reprint

The Biology, Ecology, and Management of Plant Pests

Editors: Lei Bian, Yu Gao, Suli Liu, Yuxin Zhou
XFacebookLinkedIn
Biology - ISSN 2079-7737