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Microorganisms, Volume 13, Issue 8

2025 August - 252 articles

Cover Story: Cardiac surgery, particularly procedures involving cardiopulmonary bypass (CPB), is associated with a high risk of postoperative complications, including systemic inflammatory response syndrome (SIRS), postoperative atrial fibrillation (POAF), and infection. Growing evidence suggests that the gut–heart axis, through mechanisms involving intestinal barrier integrity and gut microbiota homeostasis, may influence these outcomes. This review summarizes the relationship between gut microbiota composition and the inflammatory response in patients undergoing cardiac surgery and the extent to which these alterations impact clinical outcomes. The reviewed studies consistently show that cardiac surgery induces notable alterations in microbial diversity and composition during the perioperative period. View this paper
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Articles (252)

  • Article
  • Open Access
1 Citations
2,685 Views
17 Pages

Metagenomic Signatures of Colorectal Cancer in the Jordanian Population: A Regional Case-Control Analysis Using 16S rRNA Profiling

  • Lo’ai Alanagreh,
  • Minas A. Mustafa,
  • Mohammad Borhan Al-Zghoul,
  • Muhannad I. Massadeh,
  • Osamah Batiha,
  • Maher Sughayer,
  • Rashed Taiseer Almashakbeh,
  • Haya Bader Abu Suilike,
  • Faten S. Tout and
  • Foad Alzoughool

The gut microbiota plays a pivotal role in developing colorectal cancer (CRC) through interactions with host immunity, metabolism, and inflammation. However, microbiome-based studies remain scarce in Middle Eastern populations, limiting regional insi...

(This article belongs to the Section Gut Microbiota)
  • Article
  • Open Access
1 Citations
1,222 Views
13 Pages

Prosthetic joint infections (PJIs) pose significant challenges, often requiring multiple surgeries that lead to soft tissue loss, dead space, and fibrosis. Wound breakdown increases the risk of polymicrobial infection and treatment failure. The verti...

(This article belongs to the Special Issue Challenges of Biofilm-Associated Bone and Joint Infections)
  • Article
  • Open Access
4 Citations
1,533 Views
16 Pages

Extracellular Cr(VI) Reduction by the Salt-Tolerant Strain Bacillus safensis BSF-4

  • Yilan Liu,
  • Weiping Yu,
  • Tianying Nie,
  • Lu Wang and
  • Yusheng Niu

Microbial reduction in hexavalent chromium (Cr(VI)) is a well characterized bioremediation strategy, yet the mechanistic diversity among bacterial taxa necessitates detailed investigations into strain-specific pathways. Here, we report the isolation...

(This article belongs to the Section Environmental Microbiology)
  • Review
  • Open Access
23 Citations
5,569 Views
21 Pages

Advanced Strategies in Phage Research: Innovations, Applications, and Challenges

  • Pengfei Wu,
  • Wanwu Li,
  • Wenlu Zhang,
  • Shasha Li,
  • Bo Deng,
  • Shanghui Xu and
  • Zhongjie Li

The escalating global threat of antimicrobial resistance (AMR) underscores the urgent need for innovative therapeutics. Bacteriophages (phages), natural bacterial predators, offer promising solutions, especially when harnessed through advances in art...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Article
  • Open Access
9 Citations
2,253 Views
25 Pages

The coastal waters of Qinhuangdao are a major hotspot for harmful algal blooms (HABs) in the Bohai Sea, with Noctiluca scintillans being one of the primary algal species responsible for these events. A comprehensive understanding of the microbial com...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
1 Citations
2,299 Views
21 Pages

Microbial and Geochemical Diversity of Laguna Timone, an Extreme Hypersaline Crater Lake in Patagonia (52° S)

  • Carolina Henríquez,
  • José M. Pérez-Donoso,
  • Nicolás Bruna,
  • Mauricio Calderón,
  • Leonardo Fadel Cury,
  • Paulo Quezada,
  • Gustavo Athayde,
  • Poldie Oyarzún and
  • Anelize Bahniuk

Extreme environments, such as hypersaline habitats, hot springs, deep-sea hydrothermal vents, glaciers, and permafrost, provide diverse ecological niches for studying microbial evolution. However, knowledge of microbial communities in extreme environ...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
1 Citations
1,768 Views
25 Pages

Seasonal Variation in In Hospite but Not Free-Living, Symbiodiniaceae Communities Around Hainan Island, China

  • Tinghan Yang,
  • Zhao Qi,
  • Haihua Wang,
  • Pengfei Zheng,
  • Shuh-Ji Kao and
  • Xiaoping Diao

Coral reefs are increasingly threatened by global climate change, and mass bleaching and mortality events caused by elevated seawater temperature have led to coral loss worldwide. Hainan Island hosts extensive coral reef ecosystems in China, yet seas...

(This article belongs to the Special Issue Microbes in Aquaculture)
  • Review
  • Open Access
23 Citations
5,662 Views
29 Pages

Alzheimer’s disease (AD), a prevalent neurodegenerative disorder in the aging population, remains without definitive therapeutic solutions. Emerging insights into the gut microbiota (GM) and its bidirectional communication with the central nerv...

(This article belongs to the Section Gut Microbiota)
  • Systematic Review
  • Open Access
10 Citations
5,040 Views
15 Pages

This systematic review aimed to evaluate the association between Helicobacter pylori in the oral cavity as an extragastric reservoir and oral diseases in patients with or without gastritis. Following the PRISMA guidelines, a comprehensive search was...

(This article belongs to the Section Medical Microbiology)
  • Article
  • Open Access
6 Citations
1,391 Views
14 Pages

Zearalenone (ZEN) is a widespread estrogenic mycotoxin that poses serious health risks to both humans and animals through the contamination of cereals and feeds. In this study, a novel Bacillus strain X13 was isolated from volcanic rock soil and demo...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
2 Citations
1,417 Views
16 Pages

Insights into the Genomic Architecture and Improvement of the Capabilities of Acinetobacter calcoaceticus for the Biodegradation of Petroleum Hydrocarbons

  • Yaning Zeng,
  • Mutian Wang,
  • Xiaoyu Chang,
  • Leilei Wang,
  • Xiaowen Fu,
  • Yujie Huang,
  • Fanyong Song,
  • Lei Ji and
  • Jianing Wang

Petroleum-contaminated terrestrial ecosystems require effective bioremediation strategies. In this study, genomic analysis revealed key biodegradation genes on the Acinetobacter calcoaceticus 21# chromosome: alkane hydroxylases (alkB, almA, LadA) and...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
2 Citations
1,344 Views
14 Pages

vapD Mutation Shows Impairment in the Persistence of Helicobacter pylori Within AGS Cells

  • Rosario Morales-Espinosa,
  • Gabriela Delgado,
  • Carlos A. Santiago,
  • Alejandro Flores-Alanis,
  • Rafael Diaz-Mendez,
  • Alberto Gonzalez-Pedraza,
  • José L. Méndez and
  • Alejandro Cravioto

The Helicobacter pylori vapD gene is transcribed and expressed when the bacteria are within the gastric cell. In this current study, we investigated how vapD knockout affects the survival of H. pylori inside human gastric adenocarcinoma cells. We con...

(This article belongs to the Special Issue Bacterial Pathogenesis and Host Immune Responses)
  • Article
  • Open Access
1 Citations
1,342 Views
15 Pages

Caenorhabditis elegans, a free-living nematode model, secretes neuropeptides, but the ecological roles of its peptide exudates in regulating rhizosphere microbial activity remain largely unexplored. We identified six short peptides (P1, P9, P19, P20,...

(This article belongs to the Section Plant Microbe Interactions)
  • Article
  • Open Access
6 Citations
2,225 Views
16 Pages

BCL-2 Multi-Strain Probiotics for Immunomodulation In Vitro and In Vivo Alleviation of Atopic Dermatitis

  • MinKyung Sung,
  • Seongrok Sim,
  • Ahyoung Lim,
  • Jin Seok Moon,
  • JongIk Jeon,
  • Keon Heo,
  • Woongkwon Kwak,
  • Myeong Soo Park,
  • Jungki Kwak and
  • Seokmin Yoon
  • + 1 author

Atopic dermatitis (AD) is a chronic inflammatory disorder with immune imbalance, including elevated IgE levels and mast cell activation mediated by Th2 cytokines, leading to allergic inflammation and impaired skin barrier function. Current treatment...

(This article belongs to the Section Microbial Biotechnology)
  • Article
  • Open Access
5 Citations
1,683 Views
21 Pages

Diet Quality Modulates Gut Microbiota Structure in Blastocystis-Colonised Individuals from Two Distinct Cohorts with Contrasting Sociodemographic Profiles

  • Claudia Muñoz-Yáñez,
  • Alejandra Méndez-Hernández,
  • Faviel Francisco González-Galarza,
  • Adria Imelda Prieto-Hinojosa and
  • Janeth Oliva Guangorena-Gómez

Diet and gut microbiota are significant determinants of host health, but how dietary quality modulates gut microbiota in Blastocystis-colonised individuals remains underexplored. We studied two contrasting cohorts: university students (FACSA, n = 46)...

(This article belongs to the Section Gut Microbiota)
  • Article
  • Open Access
5 Citations
1,729 Views
15 Pages

Broad Host Range Peptide Nucleic Acids Prevent Gram-Negative Biofilms Implicated in Catheter-Associated Urinary Tract Infections

  • Hannah Q. Karp,
  • Elizabeth S. Nowak,
  • Gillian A. Kropp,
  • Nihan A. Col,
  • Michael D. Schulz,
  • Nammalwar Sriranganathan and
  • Jayasimha Rao

Biofilms develop in sequential steps resulting in the formation of three-dimensional communities of microorganisms that are encased in self-produced extracellular polymeric substances. Biofilms play a key role in device-associated infections, such as...

(This article belongs to the Special Issue Advanced Research on Microbial Biofilms—a Themed Issue in Honor of Professor Gianfranco Donelli)
  • Article
  • Open Access
7 Citations
3,063 Views
17 Pages

Macrolide-Resistant Bordetella pertussis in Hong Kong: Evidence for Post-COVID-19 Emergence of ptxP3-Lineage MT28 Clone from a Hospital-Based Surveillance Study

  • Tsz-Yung Hui,
  • Hayes Kam-Hei Luk,
  • Garnet Kwan-Yue Choi,
  • Sandy Ka-Yee Chau,
  • Lok-Man Tsang,
  • Cindy Wing-Sze Tse,
  • Ka-Kin Fung,
  • Jimmy Yiu-Wing Lam,
  • Ho-Leung Ng and
  • David Christopher Lung
  • + 5 authors

A post-COVID surge of Bordetella pertussis was observed globally. China has reported a high level of macrolide-resistant Bordetella pertussis (MRBP) in recent years; however, the epidemiology of MRBP in Hong Kong remains unknown. We retrieved archive...

(This article belongs to the Special Issue Challenges in Combating Antimicrobial Resistance in the Vulnerable Population)
  • Article
  • Open Access
2,139 Views
26 Pages

Uropathogenic Escherichia coli in a Diabetic Dog with Recurrent UTIs: Genomic Insights and the Impact of Glucose and Antibiotics on Biofilm Formation

  • Inês C. Rodrigues,
  • Marisa Ribeiro-Almeida,
  • Joana Campos,
  • Leonor Silveira,
  • Liliana Leite-Martins,
  • Jorge Ribeiro,
  • Paula Martins da Costa,
  • Joana C. Prata,
  • Ângela Pista and
  • Paulo Martins da Costa

Recurrent urinary tract infections (UTIs) pose a significant clinical challenge in both human and veterinary medicine, due to antibiotic-resistant and biofilm-forming bacteria. We hypothesized that high glucose levels in diabetic animals enhance biof...

(This article belongs to the Section Veterinary Microbiology)
  • Article
  • Open Access
2 Citations
1,346 Views
22 Pages

The Sanniang Bay (SNB) and Dafeng River Estuary (DFR) in the Northern Beibu Gulf, China, are critical habitats for the Indo-Pacific humpback dolphin (Sousa chinensis). However, whether and how the decreased dissolved oxygen (DO) has happened in botto...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
1,468 Views
17 Pages

Isolation and Characterization of the Trimethylamine (TMA)-Degrading Microbacterium lacticum Strain PM-1

  • Pai Feng,
  • Lei Zhang,
  • Yihao Wu,
  • Yuxuan Hu,
  • Wenda Chen,
  • Yuan Liu and
  • Jiayuan Yang

Trimethylamine (TMA) is a common malodorous pollutant known for its detrimental effects on both the natural environment and human health. In this study, strain PM-1 was successfully isolated from activated sludge in a sewage treatment plant and ident...

(This article belongs to the Topic The Role of Microorganisms in Waste Treatment)
  • Article
  • Open Access
3 Citations
1,596 Views
18 Pages

The biocontrol strain Streptomyces pratensis S10 was isolated from tomato leaf mold. The fermentation broth of strain S10 can effectively control Fusarium head blight (FHB), caused by Fusarium graminearum. Enhancing antifungal activity is essential i...

(This article belongs to the Section Microbial Biotechnology)
  • Article
  • Open Access
14 Citations
2,643 Views
19 Pages

Investigating the microbial community structure and stress-tolerance mechanisms in the rhizospheres of salt-adapted plants along saline lakes is critical for understanding plant–microbe interactions in extreme environments and developing effect...

(This article belongs to the Section Plant Microbe Interactions)
  • Article
  • Open Access
10 Citations
1,984 Views
22 Pages

Predictive Microbial Markers Distinguish Responders and Non-Responders to Adalimumab: A Step Toward Precision Medicine in Ulcerative Colitis

  • Shaghayegh Baradaran Ghavami,
  • Arfa Moshiri,
  • Carola Bonaretti,
  • Maryam Farmani,
  • Margherita Squillario,
  • Eddi Di Marco,
  • Shabnam Shahrokh,
  • Hedieh Balaii,
  • Maria Valeria Corrias and
  • Roberto Biassoni
  • + 2 authors

Ulcerative colitis (UC) is a chronic, relapsing inflammatory disease of the colon, often associated with gut microbial dysbiosis. Although anti-TNF-α agents, such as Adalimumab (Cinnora®), are used to treat moderate-to-severe UC, the treatm...

(This article belongs to the Section Microbiomes)
  • Article
  • Open Access
1 Citations
1,531 Views
26 Pages

The genus Microbulbifer comprises a group of marine, gram-negative bacteria known for their remarkable ability to adapt to a variety of environments. Therefore, this study aimed to investigate the genetic diversity and metabolic characteristics of M....

(This article belongs to the Special Issue State-of-the-Art Environmental Microbiology in China 2025)
  • Review
  • Open Access
1 Citations
1,584 Views
17 Pages

PapB Family Regulators as Master Switches of Fimbrial Expression

  • Fariba Akrami,
  • Hossein Jamali,
  • Mansoor Kodori and
  • Charles M. Dozois

Some bacterial species within the Enterobacteriaceae family possess different types of fimbrial (pili) adhesins that promote adherence to cells and colonization of host tissues. One of the well-characterized fimbrial systems is the pap operon, which...

(This article belongs to the Section Molecular Microbiology and Immunology)
  • Article
  • Open Access
4 Citations
1,824 Views
25 Pages

Brazilian Red Propolis and Its Active Constituent 7-O-methylvestitol Impair Early and Late Stages of Toxoplasma gondii Infection in Human Placental Models

  • Samuel Cota Teixeira,
  • Guilherme de Souza,
  • Natalia Carine Lima dos Santos,
  • Rafael Martins de Oliveira,
  • Nagela Bernadelli Sousa Silva,
  • Joed Pires de Lima Junior,
  • Alessandra Monteiro Rosini,
  • Luana Carvalho Luz,
  • Aryani Felixa Fajardo Martínez and
  • Bellisa Freitas Barbosa
  • + 10 authors

Toxoplasma gondii is a globally distributed protozoan parasite and a major cause of congenital infections, particularly in South America. Current therapies for congenital toxoplasmosis are limited by toxicity, long treatment regimens, and suboptimal...

(This article belongs to the Section Public Health Microbiology)
  • Article
  • Open Access
7 Citations
1,883 Views
16 Pages

Enhancing Electron Transfer Efficiency in Microbial Fuel Cells Through Gold Nanoparticle Modification of Saccharomyces cerevisiae

  • Teresė Kondrotaitė-Intė,
  • Antanas Zinovičius,
  • Domas Pirštelis and
  • Inga Morkvėnaitė

This study investigates microbial fuel cell (MFC) performance through the modification of Saccharomyces cerevisiae with gold nanoparticles (AuNPs) and polypyrrole (PPy). The yeast/AuNP-modified electrodes generated the highest median current of 2.57...

(This article belongs to the Section Microbial Biotechnology)
  • Article
  • Open Access
2 Citations
1,160 Views
12 Pages

Pelleting seeds to enhance sowing conditions through the incorporation of pesticides or fertilizers has become a prevalent agricultural practice. This study sought to evaluate the effect of pelletized seeds and the substances they release in the form...

(This article belongs to the Section Plant Microbe Interactions)
  • Article
  • Open Access
1 Citations
1,878 Views
25 Pages

Blood Microbiome Analysis Reveals Biomarkers of Treatment Response in Drug-Naïve Patients with First-Episode Psychosis: A Pilot Study

  • Marianthi Logotheti,
  • Thomas Gkekas,
  • Panagiotis C. Agioutantis,
  • Alex Hatzimanolis,
  • Stefania Foteli,
  • Diomi Mamma,
  • Nikolaos C. Stefanis,
  • Fragiskos N. Kolisis and
  • Heleni Loutrari

Patients with First-Episode Psychosis (FEP) exhibit variable responses to antipsychotic treatment. Emerging evidence suggests that disease-related dysbiosis of gut and oropharyngeal microbiota may lead to the abnormal translocation of microorganisms...

(This article belongs to the Special Issue Advances in Human Microbiomes)
  • Article
  • Open Access
7 Citations
1,691 Views
21 Pages

Environmental Effects on Bacterial Community Assembly in Arid and Semi-Arid Grasslands

  • Shenggang Chen,
  • Yaqi Zhang,
  • Jun Ma,
  • Mingyue Bai,
  • Yinglong Chen,
  • Jianbin Guo and
  • Lin Chen

Studying the effects of environmental factors on microbial community assemblies is crucial for understanding microbial biodiversity and ecosystem processes. Although numerous studies have explored the spatial patterns of microbial communities in surf...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
5 Citations
3,418 Views
11 Pages

Assessing Bacterial Viability and Label Accuracy in Human and Poultry Probiotics Sold in the United Kingdom

  • Mostafa Waleed Taha,
  • Danielle J. C. Fenwick,
  • Emma C. L. Marrs and
  • Abdul Shakoor Chaudhry

Accurate label claims are essential for consumer trust in probiotic efficacy, yet limited datasets are available for poultry formulations marketed in the United Kingdom. We quantified and identified the viable bacteria in twelve commercial probiotics...

(This article belongs to the Section Food Microbiology)
  • Article
  • Open Access
6 Citations
3,577 Views
23 Pages

Physico-Chemical and Antimicrobial Evaluation of Ozonated Olive Oil Produced with a Medical-Grade Generator for Veterinary Purposes

  • Călin Cosmin Repciuc,
  • Giulia-Ana-Maria Vișan,
  • Bernadette-Emoke Teleky,
  • Adela Pintea,
  • Cristiana Ștefania Novac and
  • Nicușor Valentin Oros

The search for broad-spectrum antimicrobial products that do not generate resistance upon multiple applications has led to increased scientific and clinical interest in ozonated oils. The aim of this preliminary study was to evaluate the physico-chem...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Article
  • Open Access
1,898 Views
15 Pages

Klebsiella pneumoniae is an important pathogen associated with multidrug resistance and virulence in both human and animal populations. While its prevalence and resistance patterns are well documented in clinical settings, data on K. pneumoniae in fo...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Article
  • Open Access
1 Citations
1,471 Views
18 Pages

Analysis of the Bacterial Community and Fatty Acid Composition in the Bacteriome of the Lac Insect Llaveia axin axin

  • Reiner Rincón-Rosales,
  • Miriam Díaz-Hernández,
  • Luis Alberto Manzano-Gómez,
  • Francisco Alexander Rincón-Molina,
  • Víctor Manuel Ruíz-Valdiviezo,
  • Adriana Gen-Jiménez,
  • Juan José Villalobos-Maldonado,
  • Julio César Maldonado-Gómez and
  • Clara Ivette Rincón-Molina

Microbial symbioses play crucial roles in insect physiology, contributing to nutrition, detoxification, and metabolic adaptations. However, the microbial communities associated with the lac insect Llaveia axin axin, an economically significant specie...

(This article belongs to the Special Issue Microbial Genome Analysis and Interpretation Using Computational Approaches—Second Edition)
  • Article
  • Open Access
10 Citations
2,807 Views
27 Pages

Harnessing and Degradation Mechanism of Persistent Polyethylene Waste by Newly Isolated Bacteria from Waxworm and Termite Gut Symbionts

  • Sameh Samir Ali,
  • Jianzhong Sun,
  • Rania Al-Tohamy,
  • Maha A. Khalil,
  • Tamer Elsamahy,
  • Michael Schagerl,
  • Daochen Zhu and
  • Shimaa El-Sapagh

Pollution from synthetic polymers, particularly low-density polyethylene (LDPE), poses a significant environmental challenge due to its chemical stability and resistance to degradation. This study investigates an eco-biotechnological approach involvi...

(This article belongs to the Section Environmental Microbiology)
  • Review
  • Open Access
17 Citations
7,200 Views
23 Pages

Unmasking MRSA’s Armor: Molecular Mechanisms of Resistance and Pioneering Therapeutic Countermeasures

  • Yichen Liu,
  • Hao Lu,
  • Gaowei Hu,
  • Jiaqi Liu,
  • Siqi Lian,
  • Shengmei Pang,
  • Guoqiang Zhu and
  • Xueyan Ding

Methicillin-resistant Staphylococcus aureus (MRSA), characterized by high-level β-lactam resistance and increasing multi-drug resistance, poses a severe and growing global threat to human health and public safety. This review examines MRSA&rsquo...

(This article belongs to the Section Medical Microbiology)
  • Article
  • Open Access
5 Citations
2,197 Views
22 Pages

Removal of Ibuprofen from Contaminated Water by Bioaugmentation with Novel Bacterial Strains Isolated from Sewage Sludge

  • Inés Aguilar-Romero,
  • Alba Lara-Moreno,
  • Fernando Madrid,
  • Jaime Villaverde,
  • Esteban Alonso,
  • Juan Luis Santos and
  • Esmeralda Morillo

Ibuprofen (IBP), one of the most consumed drugs in the world, is only partially removed in Wastewater Treatment Plants (WWTPs). Its presence in effluents and sewage sludge introduces IBP into the environment. It is imperative to continue research on...

(This article belongs to the Section Environmental Microbiology)
  • Review
  • Open Access
4 Citations
5,921 Views
18 Pages

Resolving the eukaryotic tree of life (eToL) remains a fundamental challenge in biology. Much of eukaryotic phylogenetic diversity is occupied by unicellular microbial eukaryotes (i.e., protists). Among these, the phylogenetic positions of a signific...

(This article belongs to the Section Molecular Microbiology and Immunology)
  • Article
  • Open Access
4 Citations
2,246 Views
14 Pages

The Influence of Moderate Electroporation on E. coli Membrane Permeability

  • Ester Bar-Hanun,
  • Ester Hanya,
  • Abhishiktha Chiliveru and
  • Rivka Cahan

This study examined the membrane permeability of E. coli, which were exposed to a moderate pulsed electric field (PEF) (3.3 kV/cm). The membrane permeability of E. coli was examined as a function of time after exposure to PEF. When comparing the perc...

(This article belongs to the Topic Applications of Biotechnology in Food and Agriculture)
  • Article
  • Open Access
2 Citations
1,285 Views
14 Pages

miR-7a-5p Contributes to Suppressing NLRP3/Caspase-1 Signaling Pathway in Response to Streptococcus suis Type 2 Infection

  • Ziteng Deng,
  • Qian Sun,
  • Shun Li,
  • Yibo Wang,
  • Yuxin Che,
  • Yunfei Huang,
  • Jiedan Liao,
  • Honglin Xie,
  • Xiaoshu Zhan and
  • Qiang Fu
  • + 1 author

Streptococcus suis type 2 (SS2) is a pathogen causing diseases like meningitis and septicaemia worldwide. While microRNAs (miRNAs) are acknowledged for their role in post-transcriptional regulation of gene expression and influence on immune responses...

(This article belongs to the Section Veterinary Microbiology)
  • Article
  • Open Access
4 Citations
2,331 Views
24 Pages

Evaluation of Biocontrol Measures to Reduce Bacterial Load and Healthcare-Associated Infections

  • Anna Vareschi,
  • Salvatore Calogero Gaglio,
  • Kevin Dervishi,
  • Arianna Minoia,
  • Giorgia Zanella,
  • Lorenzo Lucchi,
  • Elena Serena,
  • Concepcion Jimenez-Lopez,
  • Francesca Cristiana Piritore and
  • Maria Teresa Valenti
  • + 10 authors

Hospital-acquired infections (HAIs) remain a major clinical and economic burden, with pathogens such as Escherichia coli contributing to high rates of morbidity and mortality. Traditional manual disinfection methods are often insufficient, particular...

(This article belongs to the Section Medical Microbiology)
  • Article
  • Open Access
2 Citations
1,719 Views
13 Pages

Helicobacter pylori Diagnostic Testing Accuracy in a High-Prevalence Native American Population of Northern Arizona

  • Heidi E. Brown,
  • Laura Pauli,
  • Rishi Dholakia,
  • Joseph Gunderson,
  • Julia Jernberg,
  • Priscilla R. Sanderson,
  • Robin B. Harris and
  • Fernando P. Monroy

Helicobacter pylori (H. pylori) is a common gastric pathogen and a leading cause of non-cardia gastric cancers. Known determinants can affect the diagnostic accuracy of invasive clinical methods for H. pylori diagnosis. The objective of this study wa...

(This article belongs to the Special Issue Helicobacter pylori Infection: Detection and Novel Treatment)
  • Article
  • Open Access
1 Citations
1,241 Views
18 Pages

Genetic and Evolutionary Analysis of Porcine Kobuvirus in Guangxi Province, Southern China, Between 2021 and 2025

  • Yang Tang,
  • Yuwen Shi,
  • Kaichuang Shi,
  • Yanwen Yin,
  • Shuping Feng,
  • Feng Long and
  • Hongbin Si

Kobuvirus is a new genus of viruses in the Picornaviridae family causing diarrhea in animals. Porcine kobuvirus (PKV) is an important pathogen with a high rate of infection in pig herds. In this study, a total of 10,990 fecal swabs and tissue samples...

(This article belongs to the Special Issue Viral Infection on Swine: Pathogenesis, Diagnosis and Control)
  • Article
  • Open Access
5 Citations
1,786 Views
21 Pages

Isolation of Ultra-Small Opitutaceae-Affiliated Verrucomicrobia from a Methane-Fed Bioreactor

  • Olga V. Danilova,
  • Varvara D. Salova,
  • Igor Y. Oshkin,
  • Daniil G. Naumoff,
  • Anastasia A. Ivanova,
  • Natalia E. Suzina and
  • Svetlana N. Dedysh

The bacterial phylum Verrucomicrobiota accommodates free-living and symbiotic microorganisms, which inhabit a wide range of environments and specialize in polysaccharide degradation. Due to difficulties in cultivation, much of the currently available...

(This article belongs to the Special Issue Advances in Genomics and Ecology of Environmental Microorganisms)
  • Article
  • Open Access
3 Citations
1,287 Views
15 Pages

Effect of Cordyceps militaris Residue and Lactiplantibacillus plantarum on Fermentation Quality and Bacterial Community of Alfalfa Silage

  • Luheng Wei,
  • Meirong Zhao,
  • Jia Song,
  • Duo Gao,
  • Xinnan Li,
  • Juanjuan Sun,
  • Zhu Yu and
  • Chunsheng Bai

In order to reduce the environmental burden associated with Cordyceps militaris residue, we conducted a study to explore the feasibility of Cordyceps militaris residue as a silage additive. The experimental treatments included distilled sterile water...

(This article belongs to the Special Issue Microorganisms in Silage)
  • Article
  • Open Access
3 Citations
1,498 Views
17 Pages

Substrate Optimization for PHB Production from Ricotta Cheese Exhausted Whey Using Azohydromonas lata DSM 1123

  • Angela Longo,
  • Luca Sconosciuto,
  • Michela Verni,
  • Vito Emanuele Carofiglio,
  • Domenico Centrone,
  • Marianna Villano,
  • Gaia Salvatori,
  • Erica Pontonio,
  • Marco Montemurro and
  • Carlo Giuseppe Rizzello

Valorization of ricotta cheese exhausted whey (RCEW), a dairy by-product generated in large quantities worldwide, is essential to mitigate its environmental impact and unlock its economic potential. This study explores the use of RCEW as a substrate...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
5 Citations
1,425 Views
14 Pages

The S2 Glycoprotein Subunit Determines Intestinal Tropism in Infectious Bronchitis Virus

  • Zhenkai Dai,
  • Jing Zhang,
  • Ying Huang,
  • Benli Huang,
  • Zhengzhong Xiao,
  • Keyu Feng,
  • Guanming Shao,
  • Xinheng Zhang and
  • Qingmei Xie

The molecular basis for the distinct intestinal tropism of infectious bronchitis virus (IBV) strains remains poorly understood. This study identifies the S2 subunit of the spike glycoprotein as the critical determinant conferring duodenal tropism to...

(This article belongs to the Special Issue Animal Viral Infectious Diseases)
  • Article
  • Open Access
5 Citations
3,076 Views
14 Pages

Hospital infection prevention is critical to patient safety, yet data on the prevalence and contributing factors of healthcare-associated infections (HAIs) in Aljouf, Saudi Arabia, are scarce. This retrospective cross-sectional study aimed to investi...

(This article belongs to the Special Issue Healthcare-Associated Infections and Antimicrobial Therapy—2nd Edition)
  • Article
  • Open Access
7 Citations
1,980 Views
24 Pages

Altered precipitation regimes, both in intensity and duration, can profoundly influence the structure and function of soil microbial communities, yet the patterns and drivers of these responses remain unclear across ecosystem types. Here, using data...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
3 Citations
2,764 Views
13 Pages

The widespread prevalence of Salmonella underscores the urgent need for rapid, sensitive, and reliable detection methods to ensure food safety and protection of public health. In this study, we successfully developed an integrated detection system th...

(This article belongs to the Special Issue Salmonella and Food Safety)

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Microorganisms - ISSN 2076-2607