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Viruses, Volume 4, Issue 11

2012 November - 37 articles

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Articles (37)

  • Review
  • Open Access
60 Citations
13,459 Views
25 Pages

Biogenesis and Dynamics of the Coronavirus Replicative Structures

  • Marne C. Hagemeijer,
  • Peter J.M. Rottier and
  • Cornelis A.M. de Haan

21 November 2012

Coronaviruses are positive-strand RNA viruses that are important infectious agents of both animals and humans. A common feature among positive-strand RNA viruses is their assembly of replication-transcription complexes in association with cytoplasmic...

  • Article
  • Open Access
148 Citations
22,075 Views
18 Pages

Virus Pathogen Database and Analysis Resource (ViPR): A Comprehensive Bioinformatics Database and Analysis Resource for the Coronavirus Research Community

  • Brett E. Pickett,
  • Douglas S. Greer,
  • Yun Zhang,
  • Lucy Stewart,
  • Liwei Zhou,
  • Guangyu Sun,
  • Zhiping Gu,
  • Sanjeev Kumar,
  • Sam Zaremba and
  • Richard H. Scheuermann
  • + 3 authors

19 November 2012

Several viruses within the Coronaviridae family have been categorized as either emerging or re-emerging human pathogens, with Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) being the most well known. The NIAID-sponsored Virus Pathogen Datab...

  • Review
  • Open Access
34 Citations
11,446 Views
30 Pages

19 November 2012

Highly pathogenic avian influenza virus (HPAIV) of subtype H5N1 causes a devastating disease in poultry but when it accidentally infects humans it can cause death. Therefore, decrease the incidence of H5N1 in humans needs to focus on prevention and c...

  • Article
  • Open Access
68 Citations
9,308 Views
18 Pages

19 November 2012

Recently, we have reported [1,2] on a subunit influenza vaccine candidate based on the recombinant hemagglutinin protein from the A/Indonesia/05/2005 (H5N1) strain of influenza virus, produced it using ‘launch vector’-based transient expression techn...

  • Review
  • Open Access
107 Citations
15,254 Views
17 Pages

15 November 2012

The initial step of viral infection is the binding of a virus onto the host cell surface. This first viral-host interaction would determine subsequent infection steps and the fate of the entire infection process. A basic understating of the underlini...

  • Review
  • Open Access
8 Citations
8,339 Views
19 Pages

Influenza B-Cells Protective Epitope Characterization: A Passkey for the Rational Design of New Broad-Range Anti-Influenza Vaccines

  • Nicola Clementi,
  • Elena Criscuolo,
  • Matteo Castelli,
  • Nicasio Mancini,
  • Massimo Clementi and
  • Roberto Burioni

14 November 2012

The emergence of new influenza strains causing pandemics represents a serious threat to human health. From 1918, four influenza pandemics occurred, caused by H1N1, H2N2 and H3N2 subtypes. Moreover, in 1997 a novel influenza avian strain belonging to...

  • Review
  • Open Access
31 Citations
26,346 Views
23 Pages

Cellular Prion Protein: From Physiology to Pathology

  • Sei-ichi Yusa,
  • José B. Oliveira-Martins,
  • Yoshiko Sugita-Konishi and
  • Yutaka Kikuchi

14 November 2012

The human cellular prion protein (PrPC) is a glycosylphosphatidylinositol (GPI) anchored membrane glycoprotein with two N-glycosylation sites at residues 181 and 197. This protein migrates in several bands by Western blot analysis (WB). Interestingly...

  • Review
  • Open Access
18 Citations
11,661 Views
30 Pages

Running Loose or Getting Lost: How HIV-1 Counters and Capitalizes on APOBEC3-Induced Mutagenesis through Its Vif Protein

  • Carsten Münk,
  • Björn-Erik O. Jensen,
  • Jörg Zielonka,
  • Dieter Häussinger and
  • Christel Kamp

14 November 2012

Human immunodeficiency virus-1 (HIV-1) dynamics reflect an intricate balance within the viruses’ host. The virus relies on host replication factors, but must escape or counter its host’s antiviral restriction factors. The interaction between the HIV-...

  • Review
  • Open Access
316 Citations
49,193 Views
25 Pages

12 November 2012

The Coronaviridae family, an enveloped RNA virus family, and, more particularly, human coronaviruses (HCoV), were historically known to be responsible for a large portion of common colds and other upper respiratory tract infections. HCoV are now know...

  • Article
  • Open Access
40 Citations
9,341 Views
21 Pages

12 November 2012

Relationships between agents in multitrophic systems are complex and very specific. Insect-transmitted plant viruses are completely dependent on the behaviour and distribution patterns of their vectors. The presence of natural enemies may directly af...

  • Review
  • Open Access
72 Citations
16,897 Views
39 Pages

Multifunctional Nature of the Arenavirus RING Finger Protein Z

  • Sarah Katharina Fehling,
  • Frank Lennartz and
  • Thomas Strecker

9 November 2012

Arenaviruses are a family of enveloped negative-stranded RNA viruses that can cause severe human disease ranging from encephalitis symptoms to fulminant hemorrhagic fever. The bi‑segmented RNA genome encodes four polypeptides: the nucleoprotein NP, t...

  • Article
  • Open Access
13 Citations
7,826 Views
8 Pages

Rapid Detection and Differentiation of Swine-Origin Influenza A Virus (H1N1/2009) from Other Seasonal Influenza A Viruses

  • Jiangqin Zhao,
  • Xue Wang,
  • Viswanath Ragupathy,
  • Panhe Zhang,
  • Wei Tang,
  • Zhiping Ye,
  • Maryna Eichelberger and
  • Indira Hewlett

9 November 2012

We previously developed a rapid and simple gold nanoparticle(NP)-based genomic microarray assay for identification of the avian H5N1 virus and its discrimination from other influenza A virus strains (H1N1, H3N2). In this study, we expanded the platfo...

  • Review
  • Open Access
87 Citations
17,939 Views
24 Pages

HIV-1 Induced Bystander Apoptosis

  • Himanshu Garg,
  • Jonathon Mohl and
  • Anjali Joshi

9 November 2012

Apoptosis of uninfected bystander cells is a key element of HIV pathogenesis and believed to be the driving force behind the selective depletion of CD4+ T cells leading to immunodeficiency. While several viral proteins have been implicated in this pr...

  • Review
  • Open Access
19 Citations
9,073 Views
21 Pages

Molecular Signatures of Hepatitis C Virus (HCV)-Induced Type II Mixed Cryoglobulinemia (MCII)

  • Giuseppe Sautto,
  • Nicasio Mancini,
  • Massimo Clementi and
  • Roberto Burioni

8 November 2012

The role of hepatitis C virus (HCV) infection in the induction of type II mixed cryoglobulinemia (MCII) and the possible establishment of related lymphoproliferative disorders, such as B-cell non-Hodgkin lymphoma (B-NHL), is well ascertained. However...

  • Review
  • Open Access
66 Citations
14,511 Views
28 Pages

Modulation of Apoptotic Signaling by the Hepatitis B Virus X Protein

  • Siddhartha Rawat,
  • Amy J. Clippinger and
  • Michael J. Bouchard

8 November 2012

Worldwide, an estimated 350 million people are chronically infected with the Hepatitis B Virus (HBV); chronic infection with HBV is associated with the development of severe liver diseases including hepatitis and cirrhosis. Individuals who are chroni...

  • Review
  • Open Access
60 Citations
18,643 Views
49 Pages

Sharka: The Past, The Present and The Future

  • Jiri Sochor,
  • Petr Babula,
  • Vojtech Adam,
  • Boris Krska and
  • Rene Kizek

7 November 2012

Members the Potyviridae family belong to a group of plant viruses that are causing devastating plant diseases with a significant impact on agronomy and economics. Plum pox virus (PPV), as a causative agent of sharka disease, is widely discussed. The...

  • Review
  • Open Access
109 Citations
18,413 Views
22 Pages

7 November 2012

A respiratory disease caused by a novel coronavirus, termed the severe acute respiratory syndrome coronavirus (SARS-CoV), was first reported in China in late 2002. The subsequent efficient human-to-human transmission of this virus eventually affected...

  • Article
  • Open Access
118 Citations
23,744 Views
25 Pages

Discovery and Early Development of AVI-7537 and AVI-7288 for the Treatment of Ebola Virus and Marburg Virus Infections

  • Patrick L. Iversen,
  • Travis K. Warren,
  • Jay B. Wells,
  • Nicole L. Garza,
  • Dan V. Mourich,
  • Lisa S. Welch,
  • Rekha G. Panchal and
  • Sina Bavari

6 November 2012

There are no currently approved treatments for filovirus infections. In this study we report the discovery process which led to the development of antisense Phosphorodiamidate Morpholino Oligomers (PMOs) AVI-6002 (composed of AVI-7357 and AVI-7539) a...

  • Review
  • Open Access
28 Citations
8,420 Views
20 Pages

Arenaviruses and Lethal Mutagenesis. Prospects for New Ribavirin-based Interventions

  • Héctor Moreno,
  • Ana Grande-Pérez,
  • Esteban Domingo and
  • Verónica Martín

6 November 2012

Lymphocytic choriomeningitis virus (LCMV) has contributed to unveil some of the molecular mechanisms of lethal mutagenesis, or loss of virus infectivity due to increased mutation rates. Here we review these developments, and provide additional eviden...

  • Review
  • Open Access
63 Citations
17,922 Views
22 Pages

New and Emerging Viruses of Blueberry and Cranberry

  • Robert R. Martin,
  • James J. Polashock and
  • Ioannis E. Tzanetakis

6 November 2012

Blueberry and cranberry are fruit crops native to North America and they are well known for containing bioactive compounds that can benefit human health. Cultivation is expanding within North America and other parts of the world raising concern regar...

  • Article
  • Open Access
18 Citations
7,216 Views
12 Pages

5 November 2012

We investigated the proportions of mono vs. mixed infections for human metapneumovirus (hMPV) as compared to adenovirus (ADV), four types of coronavirus (CRV), parainfluenza virus (PIV), RSV, and enterovirus/rhinovirus (ERV) in Alberta, Canada. Using...

  • Review
  • Open Access
54 Citations
13,139 Views
20 Pages

Immune Responses and Lassa Virus Infection

  • Marion Russier,
  • Delphine Pannetier and
  • Sylvain Baize

5 November 2012

Lassa fever is a hemorrhagic fever endemic to West Africa and caused by Lassa virus, an Old World arenavirus. It may be fatal, but most patients recover from acute disease and some experience asymptomatic infection. The immune mechanisms associated w...

  • Review
  • Open Access
21 Citations
8,816 Views
25 Pages

1 November 2012

The emergence of a highly pathogenic avian influenza virus H5N1 has increased the potential for a new pandemic to occur. This event highlights the necessity for developing a new generation of influenza vaccines to counteract influenza disease. These...

  • Article
  • Open Access
47 Citations
13,967 Views
18 Pages

Dendritic Cell Apoptosis and the Pathogenesis of Dengue

  • Sharon De T. Martins,
  • Guilherme F. Silveira,
  • Lysangela R. Alves,
  • Claudia Nunes Duarte Dos Santos and
  • Juliano Bordignon

1 November 2012

Dengue viruses and other members of the Flaviviridae family are emerging human pathogens. Dengue is transmitted to humans by Aedes aegypti female mosquitoes. Following infection through the bite, cells of the hematopoietic lineage, like dendritic cel...

  • Article
  • Open Access
24 Citations
10,407 Views
14 Pages

30 October 2012

The K-I and nephropathogenic K-II genotypes of infectious bronchitis virus (IBV) have been isolated since 1995 and 1990, respectively, in Korea and commercial inactivated oil-emulsion vaccines containing KM91 (K-II type) and Massachusetts 41 strains...

  • Review
  • Open Access
180 Citations
19,419 Views
20 Pages

29 October 2012

The frontline of plant defense against non-viral pathogens such as bacteria, fungi and oomycetes is provided by transmembrane pattern recognition receptors that detect conserved pathogen-associated molecular patterns (PAMPs), leading to pattern-trigg...

  • Review
  • Open Access
155 Citations
18,742 Views
38 Pages

29 October 2012

The double-stranded RNA-dependent protein kinase PKR plays multiple roles in cells, in response to different stress situations. As a member of the interferon (IFN)‑Stimulated Genes, PKR was initially recognized as an actor in the antiviral action of...

  • Review
  • Open Access
49 Citations
8,075 Views
20 Pages

29 October 2012

The advent of the replicon system together with advances in cell culture have contributed significantly to our understanding of the function of virally-encoded structural and nonstructural proteins in the replication cycle of the hepatitis C virus. I...

  • Article
  • Open Access
17 Citations
9,640 Views
14 Pages

How much of Virus-Specific CD8 T Cell Reactivity is Detected with a Peptide Pool when Compared to Individual Peptides?

  • Wenji Zhang,
  • Ioana Moldovan,
  • Oleg S. Targoni,
  • Ramu A. Subbramanian and
  • Paul V. Lehmann

29 October 2012

Immune monitoring of T cell responses increasingly relies on the use of peptide pools. Peptides, when restricted by the same HLA allele, and presented from within the same peptide pool, can compete for HLA binding sites. What impact such competition...

  • Review
  • Open Access
108 Citations
27,447 Views
20 Pages

29 October 2012

Lymphocytic choriomeningitis virus (LCMV) is a common infection of rodents first identified over eighty years ago in St. Louis, MO, U.S.A. It is best known for its application in immunological studies. The history of LCMV closely correlates with the...

  • Review
  • Open Access
39 Citations
13,738 Views
29 Pages

MicroRNAs, Hepatitis C Virus, and HCV/HIV-1 Co-Infection: New Insights in Pathogenesis and Therapy

  • Archana Gupta,
  • Gokul Swaminathan,
  • Julio Martin-Garcia and
  • Sonia Navas-Martin

26 October 2012

MicroRNAs (miRNAs) can exert a profound effect on Hepatitis C virus (HCV) replication. The interaction of HCV with the highly liver-enriched miRNA, miR-122 represents one such unique example of viruses having evolved mechanism(s) to usurp the host mi...

  • Article
  • Open Access
82 Citations
16,656 Views
23 Pages

25 October 2012

Human cytomegalovirus (HCMV), the largest human herpesvirus, infects a majority of the world’s population. Like all herpesviruses, following primary productive infection, HCMV establishes a life-long latent infection, from which it can reactivate yea...

  • Article
  • Open Access
34 Citations
12,293 Views
14 Pages

Niemann-Pick C1 (NPC1)/NPC1-like1 Chimeras Define Sequences Critical for NPC1’s Function as a Filovirus Entry Receptor

  • Anuja Krishnan,
  • Emily Happy Miller,
  • Andrew S. Herbert,
  • Melinda Ng,
  • Esther Ndungo,
  • Sean P. Whelan,
  • John M. Dye and
  • Kartik Chandran

25 October 2012

We recently demonstrated that Niemann-Pick C1 (NPC1), a ubiquitous 13-pass cellular membrane protein involved in lysosomal cholesterol transport, is a critical entry receptor for filoviruses. Here we show that Niemann-Pick C1-like1 (NPC1L1), an NPC1...

  • Article
  • Open Access
13 Citations
7,905 Views
15 Pages

Insights into the Functions of a Prophage Recombination Directionality Factor

  • Gaël Panis,
  • Nathalie Franche,
  • Vincent Méjean and
  • Mireille Ansaldi

24 October 2012

Recombination directionality factors (RDFs), or excisionases, are essential players of prophage excisive recombination. Despite the essentially catalytic role of the integrase in both integrative and excisive recombination, RDFs are required to direc...

  • Article
  • Open Access
8 Citations
7,603 Views
16 Pages

Diversity and Adaptation of Human Respiratory Syncytial Virus Genotypes Circulating in Two Distinct Communities: Public Hospital and Day Care Center

  • Luiz Gustavo Araujo Gardinassi,
  • Paulo Vitor Marques Simas,
  • Deriane Elias Gomes,
  • Caroline Measso do Bonfim,
  • Felipe Cavassan Nogueira,
  • Gustavo Rocha Garcia,
  • Claudia Márcia Aparecida Carareto,
  • Paula Rahal and
  • Fátima Pereira de Souza

24 October 2012

HRSV is one of the most important pathogens causing acute respiratory tract diseases as bronchiolitis and pneumonia among infants. HRSV was isolated from two distinct communities, a public day care center and a public hospital in São José do Rio Pret...

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Viruses - ISSN 1999-4915