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Viruses, Volume 15, Issue 11

2023 November - 144 articles

Cover Story: Influenza A virus (IAV) causes severe respiratory infections and substantial global morbidity and mortality. Innate immunity, cell death, and inflammation are key in driving severe disease in response to IAV. ZBP1 is an innate immune sensor for IAV infection that triggers NLRP3 inflammasome activation and formation of a PANoptosome complex. Activation of the PANoptosome leads to inflammatory cell death, PANoptosis. However, the role of specific pore-forming molecules downstream of the PANoptosome and potential redundancies between them remain unclear. In this issue, Malireddi et al. show that IAV-induced lytic cell death, PANoptosis, activates MLKL but is not dependent on MLKL. These findings suggest that functional redundancies in pore-forming molecules drive IAV-induced PANoptosis. View this paper
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Articles (144)

  • Article
  • Open Access
4 Citations
3,311 Views
12 Pages

SARS-CoV-2 ORF3a-Mediated NF-κB Activation Is Not Dependent on TRAF-Binding Sequence

  • Brianna M. Busscher,
  • Henock B. Befekadu,
  • Zhonghua Liu and
  • Tsan Sam Xiao

8 November 2023

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has caused a global pandemic of Coronavirus Disease 2019 (COVID-19). Excessive inflammation is a hallmark of severe COVID-19, and several proteins encoded in the SARS-CoV-2 genome are capab...

(This article belongs to the Special Issue The Inflammasomes - Key Players in Antiviral Response)
  • Article
  • Open Access
11 Citations
4,442 Views
14 Pages

Long-Term Detection and Isolation of Severe Fever with Thrombocytopenia Syndrome (SFTS) Virus in Dog Urine

  • Yumiko Saga,
  • Toshikazu Yoshida,
  • Rieko Yoshida,
  • Shunsuke Yazawa and ,
  • Takahisa Shimada,
  • Noriko Inasaki,
  • Masae Itamochi,
  • Emiko Yamazaki,
  • Kazunori Oishi and
  • Hideki Tani
  • + 5 authors+ 0 author

8 November 2023

Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne infection caused by the SFTS virus (SFTSV), with a high fatality rate of approximately 30% in humans. In recent years, cases of contact infection with SFTSV via bodily fluids of infec...

(This article belongs to the Special Issue Severe Fever with Thrombocytopenia Syndrome Virus 3.0)
  • Article
  • Open Access
2 Citations
3,077 Views
13 Pages

Genomic Markers Associated with Cytomegalovirus DNAemia in Kidney Transplant Recipients

  • Guy Shapira,
  • Hadas Volkov,
  • Itai Fabian,
  • David W. Mohr and ,
  • Maria Bettinotti,
  • Noam Shomron,
  • Robin K. Avery and
  • Ravit Arav-Boger
  • + 3 authors+ 0 author

8 November 2023

Human cytomegalovirus (CMV) is a major pathogen after solid organ transplantation, leading to high morbidity and mortality. Transplantation from a CMV-seropositive donor to a CMV-seronegative recipient (D+/R−) is associated with high risk of CM...

(This article belongs to the Special Issue Immune Modulation by Human Cytomegalovirus)
  • Article
  • Open Access
3 Citations
3,156 Views
11 Pages

Genomic Surveillance of SARS-CoV-2 in México: Three Years since Wuhan, China’s First Reported Case

  • Juan Daniel Lira-Morales,
  • Osvaldo López-Cuevas,
  • José Andrés Medrano-Félix,
  • Jean Pierre González-Gómez and ,
  • Irvin González-López,
  • Nohelia Castro-Del Campo,
  • Bruno Gomez-Gil and
  • Cristóbal Chaidez
  • + 3 authors+ 0 author

8 November 2023

Objective: The aim of this work was to analyze the metadata of the SARS-CoV-2 sequences obtained from samples collected in Mexico from 2020 to 2022. Materials and Methods: Metadata of SARS-CoV-2 sequences from samples collected in Mexico up to 31 Dec...

(This article belongs to the Special Issue Molecular Epidemiology of SARS-CoV-2: 2nd Edition)
  • Article
  • Open Access
1 Citations
2,817 Views
14 Pages

Investigating the Role of Anti-TPO Antibodies in HIV-Associated Thrombocytopenia before and after Initiation of HAART: A Case-Control Longitudinal Study

  • Aristotelis Tsiakalos,
  • John G. Routsias,
  • Georgios Schinas,
  • Sarah Georgiadou and ,
  • Nikolaos V. Sipsas and
  • Karolina Akinosoglou
  • + 1 author+ 0 author

8 November 2023

This longitudinal, case-control study aimed to investigate the role of thrombopoietin (TPO) and anti-TPO antibodies in HIV-associated thrombocytopenia, focusing on the changes seen before and after the initiation of highly active antiretroviral thera...

(This article belongs to the Special Issue Opportunistic Viral Infections)
  • Article
  • Open Access
8 Citations
2,766 Views
11 Pages

A Retrospective Analysis of Porcine Circovirus Type 3 in Samples Collected from 2008 to 2021 in Mexico

  • Mónica Reséndiz-Sandoval,
  • Verónica A. Vázquez-García,
  • Kenneth Contreras-Vega,
  • Edgar A. Melgoza-González and ,
  • Verónica Mata-Haro,
  • Luis Gimenez-Lirola and
  • Jesús Hernández
  • + 2 authors+ 0 author

8 November 2023

Porcine circovirus type 3 (PCV3) is a nonenveloped virus of the Circoviridae family. This virus has been identified in pigs of different ages and pigs with several clinical manifestations of the disease or even in apparently healthy pigs. While PCV3...

(This article belongs to the Section Animal Viruses)
  • Conference Report
  • Open Access
11 Citations
5,060 Views
18 Pages

ECOPHAGE: Combating Antimicrobial Resistance Using Bacteriophages for Eco-Sustainable Agriculture and Food Systems

  • Pilar García,
  • Rafael Tabla,
  • Hany Anany,
  • Roberto Bastias and ,
  • Lone Brøndsted,
  • Susana Casado,
  • Pablo Cifuentes,
  • John Deaton,
  • Thomas G. Denes and
  • Dácil Rivera
  • + 14 authors+ 9 authors

8 November 2023

The focus of this meeting was to discuss the suitability of using bacteriophages as alternative antimicrobials in the agrifood sector. Following a One Health approach, the workshop explored the possibilities of implementing phage application strategi...

(This article belongs to the Special Issue Bacteriophage-Based Biocontrol in Agriculture, 2nd Edition)
  • Article
  • Open Access
1 Citations
2,481 Views
11 Pages

Evaluation of SARS-CoV-2-Positive Patients with Suspected Reinfection

  • Aytaj Allahverdiyeva,
  • Ali Ağaçfidan,
  • Lerzan Dogan,
  • Mustafa Önel and ,
  • Hayriye Kırkoyun Uysal,
  • Alpay Medetalibeyoğlu,
  • Naci Şenkal,
  • Elvin Alaskarov and
  • Sevim Meşe
  • + 4 authors+ 0 author

7 November 2023

The aim of this study was to investigate the reinfection rates and characteristics of SARS-CoV-2 in individuals with SARS-CoV-2 RNA present in their clinical specimens for COVID-19. Our data from the COVID-19 Laboratory of Istanbul University were an...

(This article belongs to the Collection Coronaviruses)
  • Article
  • Open Access
3 Citations
2,704 Views
17 Pages

Epidemiological Characteristics of COVID-19 during Seven Consecutive Epidemiological Waves (2020–2022) in the North Bačka District, Serbia

  • Jelena Banjac,
  • Vladimir Vuković,
  • Tatjana Pustahija,
  • Nebojša Bohucki and ,
  • Dragica Kovačević Berić,
  • Snežana Medić,
  • Vladimir Petrović and
  • Mioljub Ristić
  • + 3 authors+ 0 author

7 November 2023

The COVID-19 pandemic continues to pose a threat to global public health. The purpose of this research was to determine the epidemiological characteristics of COVID-19 in the North Bačka district while observing seven pandemic waves. The cross-s...

(This article belongs to the Section SARS-CoV-2 and COVID-19)
  • Case Report
  • Open Access
6 Citations
2,503 Views
8 Pages

Prolonged SARS-CoV-2 Infection in Patients Receiving Anti-CD20 Monoclonal Antibodies: A Diagnostic Challenged by Negative Nasopharyngeal RT-PCR and Successful Treatment with COVID-19 High-Titer Convalescent Plasma

  • Léa Da Silva,
  • Timothée Klopfenstein,
  • Vincent Gendrin,
  • Julien Clouet and ,
  • Lynda Toko,
  • Quentin Richier,
  • Thomas Leriche,
  • Raoul Nicolas,
  • Alexis Queijo and
  • Souheil Zayet
  • + 7 authors+ 2 authors

7 November 2023

We highlighted in this current paper similar prolonged respiratory presentation with COVID-19 pneumonia in four severely immunocompromised patients currently being treated with anti-CD20 monoclonal antibodies (mAbs), such as ocrelizumab and rituximab...

(This article belongs to the Special Issue COVID-19 and Pneumonia 2.0)
  • Article
  • Open Access
1 Citations
3,135 Views
13 Pages

Chemical Peeling Therapy Using Phenol for the Cervico-Vaginal Intraepithelial Neoplasia

  • Toshiyuki Maehama,
  • Sumire Shimada,
  • Jinichi Sakamoto,
  • Takeo Shibata and ,
  • Satoko Fujita,
  • Masahiro Takakura,
  • Hiroaki Takagi and
  • Toshiyuki Sasagawa
  • + 3 authors+ 0 author

7 November 2023

Objective: This study aimed to validate the use of liquid phenol-based chemical peeling therapy for cervical and vaginal intraepithelial neoplasia (CIN and VaIN, respectively), with the goal of circumventing obstetric complications associated with su...

(This article belongs to the Section Human Virology and Viral Diseases)
  • Review
  • Open Access
3 Citations
3,736 Views
26 Pages

Viral Subversion of the Chromosome Region Maintenance 1 Export Pathway and Its Consequences for the Cell Host

  • Makram Mghezzi-Habellah,
  • Léa Prochasson,
  • Pierre Jalinot and
  • Vincent Mocquet

6 November 2023

In eukaryotic cells, the spatial distribution between cytoplasm and nucleus is essential for cell homeostasis. This dynamic distribution is selectively regulated by the nuclear pore complex (NPC), which allows the passive or energy-dependent transpor...

(This article belongs to the Special Issue Host Membranes and Virus Infection Cycle)
  • Article
  • Open Access
6 Citations
2,732 Views
10 Pages

Varicella-Zoster Virus Reactivation and Increased Vascular Risk in People Living with HIV: Data from a Retrospective Cohort Study

  • Deborah Fiordelisi,
  • Mariacristina Poliseno,
  • Nicolo’ De Gennaro,
  • Eugenio Milano and ,
  • Carmen Rita Santoro,
  • Francesco Vladimiro Segala,
  • Carlo Felice Franco,
  • Giorgia Manco Cesari,
  • Luisa Frallonardo and
  • Annalisa Saracino
  • + 9 authors+ 4 authors

6 November 2023

Background: The increased vascular risk associated with varicella–zoster virus (VZV) reactivation is extensively established in the general population. This retrospective cohort study investigates whether this observation holds for People Livin...

(This article belongs to the Special Issue HIV and Co-infections: Updates and Insights, 2nd Edition)
  • Review
  • Open Access
26 Citations
5,571 Views
27 Pages

5 November 2023

G-quadruplexes (G4s) are unique non-canonical four-stranded nucleic acid secondary structures formed by guanine-rich DNA or RNA sequences. Sequences with the potential to form quadruplex motifs (pG4s) are prevalent throughout the genomes of all organ...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Article
  • Open Access
6 Citations
3,581 Views
17 Pages

5 November 2023

Pseudomonas aeruginosa is an opportunistic pathogen that can cause infections in humans, especially in hospital patients with compromised host defence mechanisms, including patients with cystic fibrosis. Filamentous bacteriophages represent a group o...

(This article belongs to the Special Issue Virus Discovery, Classification and Characterization)
  • Article
  • Open Access
4 Citations
3,807 Views
14 Pages

Global Prevalence and Hemagglutinin Evolution of H7N9 Avian Influenza Viruses from 2013 to 2022

  • Qianshuo Liu,
  • Haowen Zeng,
  • Xinghui Wu,
  • Xuelian Yang and
  • Guiqin Wang

4 November 2023

H7N9 avian influenza viruses have caused severe harm to the global aquaculture industry and human health. For further understanding of the characteristics of prevalence and hemagglutinin evolution of H7N9 avian influenza viruses, we generated the glo...

(This article belongs to the Special Issue Animal and Human Respiratory Viruses—Causes of the Next Pandemic?)
  • Article
  • Open Access
3 Citations
2,797 Views
11 Pages

Cytomegalovirus-Specific T Cells in Pediatric Liver Transplant Recipients

  • Songpon Getsuwan,
  • Nopporn Apiwattanakul,
  • Chatmanee Lertudomphonwanit,
  • Suradej Hongeng and ,
  • Sophida Boonsathorn,
  • Wiparat Manuyakorn,
  • Pornthep Tanpowpong,
  • Usanarat Anurathapan,
  • Kanchana Tangnararatchakit and
  • Suporn Treepongkaruna
  • + 5 authors+ 0 author

4 November 2023

Cytomegalovirus (CMV) infection is a major opportunistic infection after liver transplantation (LT) that necessitates monitoring. Because of the lack of studies in children, we aimed to investigate CMV-specific T cell immune reconstitution among pedi...

(This article belongs to the Section Human Virology and Viral Diseases)
  • Article
  • Open Access
9 Citations
2,433 Views
11 Pages

Features of Tat Protein in HIV-1 Sub-Subtype A6 Variants Circulating in the Moscow Region, Russia

  • Anna Kuznetsova,
  • Kristina Kim,
  • Alexander Tumanov,
  • Iana Munchak and ,
  • Anastasiia Antonova,
  • Aleksey Lebedev,
  • Ekaterina Ozhmegova,
  • Elena Orlova-Morozova,
  • Elena Drobyshevskaya and
  • Elena Kazennova
  • + 7 authors+ 2 authors

4 November 2023

Tat, the trans-activator of transcription, is a multifunctional HIV-1 protein that can induce chronic inflammation and the development of somatic diseases in HIV-infected patients. Natural polymorphisms in Tat can impact the propagation of the inflam...

(This article belongs to the Special Issue Advances in Research on HIV Drug Resistance and Other Determinants of Treatment Success: 2nd Edition)
  • Article
  • Open Access
15 Citations
3,350 Views
17 Pages

Human Complement Inhibits Myophages against Pseudomonas aeruginosa

  • Julia E. Egido,
  • Simon O. Dekker,
  • Catherine Toner-Bartelds,
  • Cédric Lood and ,
  • Suzan H. M. Rooijakkers,
  • Bart W. Bardoel and
  • Pieter-Jan Haas
  • + 2 authors+ 0 author

3 November 2023

Therapeutic bacteriophages (phages) are primarily chosen based on their in vitro bacteriolytic activity. Although anti-phage antibodies are known to inhibit phage infection, the influence of other immune system components is less well known. An impor...

(This article belongs to the Special Issue Viruses versus Bacteria—Novel Approaches to Phage Therapy as a Tool against Multidrug-Resistant Pathogens)
  • Article
  • Open Access
1 Citations
1,778 Views
11 Pages

Epidemiological and Genomic Analysis of Asymptomatic SARS-CoV-2 Infections during the Delta and Omicron Epidemic Waves in São Paulo City, Brazil

  • Svetoslav N. Slavov,
  • Alex R. J. Lima,
  • Gabriela Ribeiro,
  • Loyze P. O. de Lima and ,
  • Claudia R. dos S. Barros,
  • Elaine C. Marqueze,
  • Antonio J. Martins,
  • Maiara Martininghi,
  • Melissa Palmieri and
  • Maria C. Elias
  • + 13 authors+ 8 authors

3 November 2023

We examined the asymptomatic rates of SARS-CoV-2 infection during the Delta and Omicron waves in the city of São Paulo. Nasopharyngeal swabs were collected at strategic points of the city (open-air markets, bus terminals, airports) for SARS-Co...

(This article belongs to the Special Issue Molecular Epidemiology of SARS-CoV-2: 2nd Edition)
  • Article
  • Open Access
13 Citations
3,657 Views
18 Pages

Seneca Valley Virus Degrades STING via PERK and ATF6-Mediated Reticulophagy

  • Ling Bai,
  • Rui Zhang,
  • Haixue Zheng,
  • Zhixiong Zhang and ,
  • Zhidong Zhang and
  • Yanmin Li
  • + 1 author+ 0 author

3 November 2023

Seneca Valley Virus (SVV), a member of the Picornaviridae family, is an emerging porcine virus that can cause vesicular disease in pigs. However, the immune evasion mechanism of SVV remains unclear, as does its interaction with other pathways. STING...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Article
  • Open Access
6 Citations
6,699 Views
17 Pages

HantaNet: A New MicrobeTrace Application for Hantavirus Classification, Genomic Surveillance, Epidemiology and Outbreak Investigations

  • Roxana Cintron,
  • Shannon L. M. Whitmer,
  • Evan Moscoso,
  • Ellsworth M. Campbell and ,
  • Reagan Kelly,
  • Emir Talundzic,
  • Melissa Mobley,
  • Kuo Wei Chiu,
  • Elizabeth Shedroff and
  • William M. Switzer
  • + 8 authors+ 3 authors

2 November 2023

Hantaviruses zoonotically infect humans worldwide with pathogenic consequences and are mainly spread by rodents that shed aerosolized virus particles in urine and feces. Bioinformatics methods for hantavirus diagnostics, genomic surveillance and epid...

(This article belongs to the Special Issue Infectious Disease Epidemiology and Transmission Dynamics 2.0)
  • Article
  • Open Access
14 Citations
4,468 Views
14 Pages

West Nile Virus, an Underdiagnosed Cause of Acute Fever of Unknown Origin and Neurological Disease among Hospitalized Patients in South Africa

  • Caitlin MacIntyre,
  • Carla Lourens,
  • Adriano Mendes,
  • Maryke de Villiers and ,
  • Theunis Avenant,
  • Nicolette M. du Plessis,
  • Fabian H. Leendertz and
  • Marietjie Venter
  • + 3 authors+ 0 author

2 November 2023

West Nile virus (WNV), a mosquito-borne flavivirus, is endemic to South Africa. However, its contribution to acute febrile and neurological disease in hospitalized patients in South Africa is unknown. This study examined two patient cohorts for WNV u...

(This article belongs to the Section Human Virology and Viral Diseases)
  • Article
  • Open Access
12 Citations
3,047 Views
23 Pages

MiR-155 Negatively Regulates Anti-Viral Innate Responses among HIV-Infected Progressors

  • Puja Pawar,
  • Jyotsna Gokavi,
  • Shilpa Wakhare,
  • Rajani Bagul and ,
  • Ujjwala Ghule,
  • Ishrat Khan,
  • Varada Ganu,
  • Anupam Mukherjee,
  • Ashwini Shete and
  • Vandana Saxena
  • + 6 authors+ 1 author

1 November 2023

HIV infection impairs host immunity, leading to progressive disease. An anti-retroviral treatment efficiently controls viremia but cannot completely restore the immune dysfunction in HIV-infected individuals. Both host and viral factors determine the...

(This article belongs to the Special Issue Host Cell–Virus Interaction 2.0)
  • Correction
  • Open Access
1 Citations
1,272 Views
2 Pages

Correction: He et al. In Vivo Imaging Sheds Light on the Susceptibility and Permissivity of Carassius auratus to Cyprinid Herpesvirus 2 According to Developmental Stage. Viruses 2023, 15, 1746

  • Bo He,
  • Arun Sridhar,
  • Cindy Streiff,
  • Caroline Deketelaere and ,
  • Haiyan Zhang,
  • Yuan Gao,
  • Yunlong Hu,
  • Sebastien Pirotte,
  • Natacha Delrez and
  • Alain F. C. Vanderplasschen
  • + 7 authors+ 2 authors

1 November 2023

In the original publication [...]

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
6 Citations
2,684 Views
15 Pages

An Advanced Multiplex Real-Time Reverse Transcription Loop-Mediated Isothermal Amplification Assay for Rapid and Reliable Detection of Porcine Epidemic Diarrhea Virus and Porcine Internal Positive Control

  • Hye-Ryung Kim,
  • Jong-Min Kim,
  • Ji-Su Baek,
  • Jonghyun Park and ,
  • Won-Il Kim,
  • Bok Kyung Ku,
  • Hye-Young Jeoung,
  • Kyoung-Ki Lee and
  • Choi-Kyu Park
  • + 4 authors+ 0 author

1 November 2023

For rapid and reliable detection of porcine epidemic diarrhea virus (PEDV) from pig clinical samples, a multiplex, real-time, reverse transcription loop-mediated isothermal amplification (mqRT-LAMP) was developed using two sets of primers and assimil...

(This article belongs to the Special Issue Porcine Epidemic Diarrhea Virus (PEDV): Pathogenesis and Prevention)
  • Review
  • Open Access
5 Citations
4,482 Views
14 Pages

31 October 2023

Rapid development and deployment of vaccines greatly reduced mortality and morbidity during the COVID-19 pandemic. The most widely used COVID-19 vaccines approved by national regulatory authorities require intramuscular administration. SARS-CoV-2 ini...

(This article belongs to the Special Issue SARS-CoV-2: Vaccine Design and Host Immunity)
  • Article
  • Open Access
10 Citations
4,287 Views
17 Pages

Crystal Structure of Inhibitor-Bound GII.4 Sydney 2012 Norovirus 3C-Like Protease

  • Alice-Roza Eruera,
  • Alice M. McSweeney,
  • Geena M. McKenzie-Goldsmith,
  • Helen K. Opel-Reading and ,
  • Simone X. Thomas,
  • Ashley C. Campbell,
  • Louise Stubbing,
  • Andrew Siow,
  • Jonathan G. Hubert and
  • Kurt L. Krause
  • + 7 authors+ 2 authors

31 October 2023

Norovirus is the leading cause of viral gastroenteritis worldwide, and there are no approved vaccines or therapeutic treatments for chronic or severe norovirus infections. The structural characterisation of the norovirus protease and drug development...

(This article belongs to the Section Animal Viruses)
  • Article
  • Open Access
13 Citations
3,592 Views
25 Pages

Endogenous Viral Elements in Ixodid Tick Genomes

  • Miranda Barnes and
  • Dana C. Price

31 October 2023

The documentation of endogenous viral elements (EVEs; virus-derived genetic material integrated into the genome of a nonviral host) has offered insights into how arthropods respond to viral infection via RNA interference pathways. Small non-coding RN...

(This article belongs to the Section General Virology)
  • Review
  • Open Access
18 Citations
4,525 Views
19 Pages

31 October 2023

Flaviviruses are a family of enveloped viruses with a positive-sense RNA genome, transmitted by arthropod vectors. These viruses are known for their broad cellular tropism leading to infection of multiple body systems, which can include the central n...

(This article belongs to the Special Issue Neurotropic Viral Pathogens)
  • Communication
  • Open Access
7 Citations
2,285 Views
10 Pages

31 October 2023

HCV infection is still a major burden worldwide, and most countries are not on track to meet the WHO 2030 elimination goal. The current challenge is to identify individuals to be treated. In this study, we will describe the trend of new DAA prescript...

(This article belongs to the Special Issue Ways to Eliminate Viral Hepatitis as a Global Health Threat 2.0)
  • Article
  • Open Access
3 Citations
4,070 Views
18 Pages

Transcriptomic Profiling of Influenza A Virus-Infected Mouse Lung at Recovery Stage Using RNA Sequencing

  • Huda A. M. Al-Shalan,
  • Dailun Hu,
  • Penghao Wang,
  • Jasim Uddin and ,
  • Abha Chopra,
  • Wayne K. Greene and
  • Bin Ma
  • + 2 authors+ 0 author

31 October 2023

Influenza A virus (IAV) is known to cause mild to severe respiratory illness. Under some conditions, the infection can lead to pneumonia (viral or bacterial), acute respiratory distress syndrome, and other complications that can be fatal, especially...

(This article belongs to the Section Human Virology and Viral Diseases)
  • Review
  • Open Access
7 Citations
4,144 Views
17 Pages

31 October 2023

P-selectin glycoprotein ligand-1 (PSGL-1) has been established to be a cell adhesion molecule that is involved in the cellular rolling mechanism and the extravasation cascade, enabling the recruitment of immune cells to sites of inflammation. In rece...

(This article belongs to the Special Issue HIV-1 Infection and Immunometabolism: Relevance to HIV Pathogenesis and Persistence 2.0)
  • Brief Report
  • Open Access
10 Citations
3,816 Views
9 Pages

Estimating the Transmission Kernel for Lumpy Skin Disease Virus from Data on Outbreaks in Thailand in 2021

  • Veerasak Punyapornwithaya,
  • Roderick Salvador,
  • Wittawat Modethed,
  • Orapun Arjkumpa and ,
  • Chaiwat Jarassaeng,
  • Georgina Limon and
  • Simon Gubbins
  • + 2 authors+ 0 author

31 October 2023

Nationwide outbreaks of lumpy skin disease (LSD) were observed in Thailand in 2021. A better understanding of its disease transmission is crucial. This study utilized a kernel-based approach to characterize the transmission of LSD between cattle herd...

(This article belongs to the Special Issue Capripox Viruses: A Continuing Transboundary Threat to Animal Health)
  • Review
  • Open Access
9 Citations
10,486 Views
19 Pages

31 October 2023

Genital herpes, primarily caused by herpes simplex virus-2 (HSV-2), remains a pressing global health concern. Its remarkable ability to intertwine with cellular processes, from harnessing host machinery for replication to subverting antiviral defense...

(This article belongs to the Special Issue Herpesvirus Manipulation of Cellular Processes 2.0)
  • Article
  • Open Access
2 Citations
2,096 Views
14 Pages

Genomic and Epidemiologic Surveillance of SARS-CoV-2 in the Pandemic Period: Sequencing Network of the Lazio Region, Italy

  • Martina Rueca,
  • Giulia Berno,
  • Alessandro Agresta,
  • Martina Spaziante and ,
  • Cesare Ernesto Maria Gruber,
  • Lavinia Fabeni,
  • Emanuela Giombini,
  • Ornella Butera,
  • Alessandra Barca and
  • SARS-CoV-2 Lazio Genomic Surveillance Study Group
  • + 10 authors+ 5 authors

31 October 2023

Since the beginning of the COVID-19 pandemic, large-scale genomic sequencing has immediately pointed out that SARS-CoV-2 has rapidly mutated during the course of the pandemic, resulting in the emergence of variants with a public health impact. In thi...

(This article belongs to the Special Issue Molecular Epidemiology of SARS-CoV-2: 2nd Edition)
  • Article
  • Open Access
7 Citations
2,961 Views
15 Pages

Identification of 2,4-Diaminoquinazoline Derivative as a Potential Small-Molecule Inhibitor against Chikungunya and Ross River Viruses

  • Amrita Saha,
  • Badri Narayan Acharya,
  • Manmohan Parida,
  • Nandita Saxena and ,
  • Jaya Rajaiya and
  • Paban Kumar Dash
  • + 1 author+ 0 author

31 October 2023

Alphaviruses are serious zoonotic threats responsible for significant morbidity, causing arthritis or encephalitis. So far, no licensed drugs or vaccines are available to combat alphaviral infections. About 300,000 chikungunya virus (CHIKV) infection...

(This article belongs to the Special Issue Antivirals against Arboviruses)
  • Article
  • Open Access
4 Citations
2,635 Views
17 Pages

Novel P335-like Phage Resistance Arises from Deletion within Putative Autolysin yccB in Lactococcus lactis

  • Jenny Seiler,
  • Anne Millen,
  • Dennis A. Romero,
  • Damian Magill and
  • Laura Simdon

31 October 2023

Lactococcus lactis and Lactococcus cremoris are broadly utilized as starter cultures for fermented dairy products and are inherently impacted by bacteriophage (phage) attacks in the industrial environment. Consequently, the generation of bacteriophag...

(This article belongs to the Section Bacterial Viruses)
  • Article
  • Open Access
19 Citations
3,981 Views
23 Pages

Whole Genomic Constellation of Avian Reovirus Strains Isolated from Broilers with Arthritis in North Carolina, USA

  • Islam Nour,
  • Sonsiray Alvarez-Narvaez,
  • Telvin L. Harrell,
  • Steven J. Conrad and
  • Sujit K. Mohanty

31 October 2023

Avian reovirus (ARV) is an emerging pathogen which causes significant economic challenges to the chicken and turkey industry in the USA and globally, yet the molecular characterization of most ARV strains is restricted to a single particular gene, th...

(This article belongs to the Special Issue Avian Viral Disease Associated with Immunosuppression and Immune-Evasion)
  • Article
  • Open Access
5 Citations
3,225 Views
12 Pages

Nanoluciferase Reporter Zika Viruses as Tools for Assessing Infection Kinetics and Antibody Potency

  • Yanqun Xu,
  • Devin Vertrees,
  • Yong He,
  • Sanaz Momben-Abolfath and ,
  • Xiaohong Li,
  • Yambasu A. Brewah,
  • Dorothy E. Scott,
  • Krishnamurthy Konduru,
  • Maria Rios and
  • Evi B. Struble
  • + 5 authors+ 0 author

31 October 2023

Zika virus (ZIKV) has become endemic in multiple tropical and subtropical regions and has the potential to become widespread in countries with limited prior exposure to this infection. One of the most concerning sequelae of ZIKV infection is the tera...

(This article belongs to the Special Issue Arbovirus Diagnostics)
  • Article
  • Open Access
6 Citations
2,645 Views
11 Pages

The Time-Dependent Association of Torque Teno Virus Load with the Level of SARS-CoV-2 S1 IgG Antibodies Following COVID-19 Vaccination in Kidney Transplant Recipients

  • Céline Imhof,
  • Lianne Messchendorp,
  • Debbie van Baarle,
  • Ron T. Gansevoort and ,
  • Coretta Van Leer-Buter and
  • Jan-Stephan F. Sanders
  • + 1 author+ 0 author

31 October 2023

Kidney transplant recipients (KTR) show an impaired humoral immune response to COVID-19 vaccination due to their immunocompromised status. Torque teno virus (TTV) is a possible marker of immune function. This marker may be helpful in predicting the i...

(This article belongs to the Special Issue COVID-19 Diagnostics in Clinical Applications and Pandemic Controls 2023)
  • Article
  • Open Access
6 Citations
3,640 Views
14 Pages

Detection of Immune Escape and Basal Core Promoter/Precore Gene Mutations in Hepatitis B Virus Isolated from Asymptomatic Hospital Attendees in Two Southwestern States in Nigeria

  • Oguntope Adeorike Sobajo,
  • Judith Uche Oguzie,
  • Benjamin Adegboyega,
  • Philomena Eromon and ,
  • Christian Happi,
  • Isaac Komolafe and
  • Onikepe Folarin
  • + 2 authors+ 0 author

31 October 2023

Several mutations in the surface (S), basal core promoter (BCP), and precore (PC) genes of the hepatitis B virus have been linked to inaccurate diagnosis and the development of immune escape mutants (IEMs) of the infection, which can lead to chronic...

(This article belongs to the Section Human Virology and Viral Diseases)
  • Article
  • Open Access
3 Citations
2,975 Views
14 Pages

Real-World Effectiveness of COVID-19 Vaccine and Identification of SARS-CoV-2 Variants among People Living with HIV on Highly Active Antiretroviral Therapy in Central Kerala of India—An Ambi-Directional Cohort Study

  • Joe Thomas,
  • Priyanka Rajmohan,
  • Ponnu Jose,
  • Radhika Kannan and ,
  • Rosmi Jose,
  • Unnikrishnan Uttumadathil Gopinathan,
  • Lucy Raphael,
  • Nithya M. Baiju,
  • Swathi Krishna and
  • Alex George
  • + 13 authors+ 8 authors

30 October 2023

Background: Vaccine effectiveness for first-generation coronavirus disease (COVID-19) vaccines among People Living with HIV (PLHIV) in India remains unexplored. This study entails the estimation of the real-world effectiveness of COVID-19 vaccines (A...

(This article belongs to the Special Issue SARS-CoV-2 and Other Vaccines: Immunogenicity Parameters and Protection 2nd Edition)
  • Review
  • Open Access
13 Citations
5,691 Views
25 Pages

Hepatitis B Virus Genotype H: Epidemiological, Molecular, and Clinical Characteristics in Mexico

  • Arturo Panduro,
  • Sonia Roman,
  • Saul Laguna-Meraz and
  • Alexis Jose-Abrego

30 October 2023

The hepatitis B virus (HBV), comprising of ten genotypes (A-J), has been a silent threat against humanity, constituting a public health problem worldwide. In 2016, the World Health Organization set forth an impressive initiative for the global elimin...

(This article belongs to the Special Issue Viral Hepatitis in Latin America and the Caribbean)
  • Article
  • Open Access
5 Citations
2,593 Views
13 Pages

Norovirus-Associated Gastroenteritis Vesikari Score and Pre-Existing Salivary IgA in Young Children from Rural South Africa

  • Jean-Pierre Kabue,
  • Ronewa Khumela,
  • Emma Meader,
  • Marcia Terezinha Baroni de Moraes and ,
  • Afsatou Ndama Traore and
  • Natasha Potgieter
  • + 1 author+ 0 author

30 October 2023

Norovirus (NoV) is the leading cause of viral gastroenteritis, mostly affecting young children worldwide. However, limited data are available to determine the severity of norovirus-associated AGE (acute gastroenteritis) and to correlate it with the N...

(This article belongs to the Section Human Virology and Viral Diseases)
  • Article
  • Open Access
13 Citations
2,286 Views
21 Pages

Predictive Model for Mortality in Severe COVID-19 Patients across the Six Pandemic Waves

  • Nazaret Casillas,
  • Antonio Ramón,
  • Ana María Torres,
  • Pilar Blasco and
  • Jorge Mateo

30 October 2023

The impact of SARS-CoV-2 infection remains substantial on a global scale, despite widespread vaccination efforts, early therapeutic interventions, and an enhanced understanding of the disease’s underlying mechanisms. At the same time, a signifi...

(This article belongs to the Section SARS-CoV-2 and COVID-19)
  • Article
  • Open Access
6 Citations
2,831 Views
17 Pages

30 October 2023

Rift Valley fever virus (RVFV) is considered to be a high biodefense priority based on its threat to livestock and its ability to cause human hemorrhagic fever. RVFV-infected livestock are also a significant risk factor for human infection by direct...

(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
  • Article
  • Open Access
1,719 Views
16 Pages

30 October 2023

(1) Background: Since the emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the evolutionary traits of its variants have been revealed. However, the temporal order of the majority of mutations harbored by variants after the c...

(This article belongs to the Special Issue Recombinant Variants of SARS-CoV-2)
  • Article
  • Open Access
4 Citations
2,506 Views
24 Pages

COVID-19 Incidence Proportion as a Function of Regional Testing Strategy, Vaccination Coverage, and Vaccine Type

  • Areg A. Totolian,
  • Viacheslav S. Smirnov,
  • Alexei A. Krasnov,
  • Edward S. Ramsay and ,
  • Vladimir G. Dedkov and
  • Anna Y. Popova
  • + 1 author+ 0 author

30 October 2023

Introduction: The COVID-19 pandemic has become a serious challenge for humanity almost everywhere globally. Despite active vaccination around the world, the incidence proportion in different countries varies significantly as of May 2022. The reason m...

(This article belongs to the Collection Coronaviruses)
  • Article
  • Open Access
9 Citations
2,722 Views
12 Pages

Vaccination and Antiviral Treatment Reduce the Time to Negative SARS-CoV-2 Swab: A Real-Life Study

  • Andrea De Vito,
  • Giulia Moi,
  • Laura Saderi,
  • Mariangela V. Puci and ,
  • Agnese Colpani,
  • Laura Firino,
  • Anna Puggioni,
  • Sergio Uzzau,
  • Sergio Babudieri and
  • Giordano Madeddu
  • + 6 authors+ 1 author

30 October 2023

Clinical trials demonstrated the role of vaccines and antiviral treatments against SARS-CoV-2 in reducing the likelihood of disease progression and death. However, there are limited data available regarding the time to negativity of people who receiv...

(This article belongs to the Special Issue Efficacy and Safety of Antiviral Therapy 2nd Edition)

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Viruses - ISSN 1999-4915