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Current Issues in Molecular Biology, Volume 44, Issue 4

2022 April - 27 articles

Cover Story: Ehlers–Danlos syndrome (EDS) is a common, congenital connective tissue disorder. Diagnosis of EDS must be established based on clinical criteria and confirmed by molecular analysis. Some may share their symptoms with other types of EDS (mainly with hypermobile, classical-like, or vascular) or other connective tissue disorders, and establishing their diagnosis is possible only after molecular investigation.
Next-generation sequencing, with an appropriate multigene panel, showed great potential to assist in the diagnosis of EDS and other connective tissue disorders. View this paper.
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Articles (27)

  • Article
  • Open Access
14 Citations
4,682 Views
14 Pages

Dysregulation of miR-21-5p, miR-93-5p, miR-200c-3p and miR-205-5p in Oral Squamous Cell Carcinoma: A Potential Biomarkers Panel?

  • Ovidiu Aghiorghiesei,
  • Oana Zanoaga,
  • Lajos Raduly,
  • Alexandra Iulia Aghiorghiesei,
  • Paul Chiroi,
  • Andrada Trif,
  • Rares Buiga,
  • Liviuta Budisan,
  • Ondine Lucaciu and
  • Ioana Berindan-Neagoe
  • + 3 authors

Oral squamous cell carcinoma (OSCC) is considered the sixth most common cancer worldwide. To reduce the high mortality of the disease, sensitive and specific diagnostic and prognostic biomarkers are urgently needed. Non-coding RNA, microRNAs (miRNAs)...

  • Article
  • Open Access
5 Citations
4,847 Views
14 Pages

Thymoquinone (TQ) Inhibits Inflammation and Migration of THP-1 Macrophages: Mechanistic Insights into the Prevention of Atherosclerosis Using In-Vitro and In-Silico Analysis

  • Etimad Huwait,
  • Nouf Al-Gharawi,
  • Maryam A. Al-Ghamdi,
  • Mamdooh Gari,
  • Alexandre Prola,
  • Peter Natesan Pushparaj and
  • Gauthaman Kalamegam

Atherosclerosis is an inflammatory disease mediated by interferon (IFN-γ) in concert with cell adhesion molecules and chemokines. Thymoquinone (TQ), a flavonoid derived from Nigella sativa, is reported to have anti-inflammatory, antioxidant, an...

  • Article
  • Open Access
1 Citations
3,442 Views
15 Pages

Chemical Reaction Networks’ Programming for Solving Equations

  • Ziwei Shang,
  • Changjun Zhou and
  • Qiang Zhang

The computational ability of the chemical reaction networks (CRNs) using DNA as the substrate has been verified previously. To solve more complex computational problems and perform the computational steps as expected, the practical design of the basi...

  • Article
  • Open Access
11 Citations
6,811 Views
12 Pages

Associations of APOE Gene Variants rs429358 and rs7412 with Parameters of the Blood Lipid Profile and the Risk of Myocardial Infarction and Death in a White Population of Western Siberia

  • Sergey Semaev,
  • Elena Shakhtshneider,
  • Liliya Shcherbakova,
  • Dinara Ivanoshchuk,
  • Pavel Orlov,
  • Sophia Malyutina,
  • Valery Gafarov,
  • Yuliya Ragino and
  • Mikhail Voevoda

The present study aimed to analyze possible associations of rs7412 and rs429358 of the APOE gene with lipid profile parameters, the risk of myocardial infarction, and death in the mostly white population of Western Siberia (Russia). The study populat...

  • Article
  • Open Access
5 Citations
4,475 Views
12 Pages

Increased Production of Interleukin-10 and Tumor Necrosis Factor-Alpha in Stimulated Peripheral Blood Mononuclear Cells after Inhibition of S100A12

  • Huang-Pin Wu,
  • Chien-Ming Chu,
  • Pi-Hua Liu,
  • Shaw-Woei Leu,
  • Shih-Wei Lin,
  • Han-Chung Hu,
  • Kuo-Chin Kao,
  • Li-Fu Li and
  • Chung-Chieh Yu

Sepsis may induce immunosuppression and result in death. S100A12 can bind to the receptor for advanced glycation end-products (RAGE) and Toll-like receptor (TLR)4 following induction of various inflammatory responses. It is unclear whether S100A12 si...

  • Article
  • Open Access
1 Citations
3,577 Views
13 Pages

Validation Study to Determine the Accuracy of Widespread Promoterless EGFP Reporter at Assessing CRISPR/Cas9-Mediated Homology Directed Repair

  • Wanqing Xu,
  • Qingxia Zuo,
  • Dongyan Feng,
  • Changsheng He,
  • Cailing Lin,
  • Dongchao Huang,
  • Yanbin Wan,
  • Feng Chen,
  • Guosheng Mo and
  • Lizhen Huang
  • + 2 authors

An accurate visual reporter system to assess homology-directed repair (HDR) is a key prerequisite for evaluating the efficiency of Cas9-mediated precise gene editing. Herein, we tested the utility of the widespread promoterless EGFP reporter to asses...

  • Article
  • Open Access
21 Citations
3,628 Views
11 Pages

Cyanidin-3-Glucoside Modulates hsa_circ_0001345/miRNA106b/ATG16L1 Axis Expression as a Potential Protective Mechanism against Hepatocellular Carcinoma

  • Shaimaa Zabady,
  • Nievin Mahran,
  • Mohamed A. Soltan,
  • Muhammad Alaa Eldeen,
  • Refaat A. Eid,
  • Sarah Albogami,
  • Eman Fayad,
  • Marwa Matboli,
  • Eman K. Habib and
  • Asmaa R. Abdel-Hamed
  • + 4 authors

Hepatocellular carcinoma (HCC) is the most common form of malignancy in the liver. Autophagy was found to have a significant effect in controlling HCC. Anthocyanins, which are naturally occurring pigments in a variety of fruits and vegetables, have b...

  • Article
  • Open Access
14 Citations
3,706 Views
13 Pages

Chronic low-grade inflammation is a key contributor to the progression of kidney disease. The release of cytokines and other pro-inflammatory proteins may further contribute to detrimental kidney health by increasing interstitial edema and renal fibr...

  • Comment
  • Open Access
10 Citations
43,010 Views
3 Pages

Aldén et al. (2022) recently reported the intracellular reverse transcription of Pfizer BioNTech COVID-19 mRNA Vaccine BNT162b2 in vitro in a human liver cell line (Huh7) [...]

  • Article
  • Open Access
5 Citations
3,562 Views
15 Pages

ATP-binding cassette (ABC) transporters play an important role in driving the exchange of multiple molecules across cell membranes. The plant ABC transporter family is among the largest protein families, and recent progress has advanced our understan...

  • Communication
  • Open Access
1 Citations
3,407 Views
20 Pages

Microtubule-associated proteins (MAPs) are essential for the accurate division of a cell into two daughter cells. These proteins target specific microtubules to be incorporated into the spindle midzone, which comprises a special array of microtubules...

  • Article
  • Open Access
16 Citations
3,208 Views
16 Pages

Characterization of the Impacts of Living at High Altitude in Taif: Oxidative Stress Biomarker Alterations and Immunohistochemical Changes

  • Mohamed Mohamed Soliman,
  • Adil Aldhahrani,
  • Fayez Althobaiti,
  • Mohamed Mohamed Ahmed,
  • Samy Sayed,
  • Saqer Alotaibi,
  • Mustafa Shukry and
  • Ahmed M. El-Shehawi

At high elevations, the human body experiences a number of pathological, physiological, and biochemical changes, all of which have adverse impacts on human health and organ vitality. This study aimed to investigate the alterations in the liver and ki...

  • Article
  • Open Access
9 Citations
5,564 Views
13 Pages

Antihistamines have potent efficacy to alleviate COVID-19 (Coronavirus disease 2019) symptoms such as anti-inflammation and as a pain reliever. However, the pharmacological mechanism(s), key target(s), and drug(s) are not documented well against COVI...

  • Article
  • Open Access
3 Citations
4,854 Views
10 Pages

CRISPR/Cas9 Screening for Identification of Genes Required for the Growth of Ovarian Clear Cell Carcinoma Cells

  • Ayako Kawabata,
  • Tomoatsu Hayashi,
  • Yoko Akasu-Nagayoshi,
  • Ai Yamada,
  • Naomi Shimizu,
  • Naoko Yokota,
  • Ryuichiro Nakato,
  • Katsuhiko Shirahige,
  • Aikou Okamoto and
  • Tetsu Akiyama

Epithelial ovarian cancer is classified into four major histological subtypes: serous, clear cell, endometrioid and mucinous. Ovarian clear cell carcinoma (OCCC) responds poorly to conventional chemotherapies and shows poor prognosis. Thus, there is...

  • Article
  • Open Access
9 Citations
3,110 Views
23 Pages

ERβ, an ER subtype first identified in 1996, is highly expressed in different types of BCa including ERα-negative BCa and TNBC. Many studies on ERβ expression investigated mostly on ERβ1 protein expression in ERα-positive a...

  • Article
  • Open Access
7 Citations
3,959 Views
12 Pages

Comparison of Next-Generation Sequencing and Polymerase Chain Reaction for Personalized Treatment-Related Genomic Status in Patients with Metastatic Colorectal Cancer

  • Wei-Chih Su,
  • Yi-Chen Tsai,
  • Hsiang-Lin Tsai,
  • Tsung-Kun Chang,
  • Tzu-Chieh Yin,
  • Ching-Wen Huang,
  • Yen-Cheng Chen,
  • Ching-Chun Li,
  • Po-Jung Chen and
  • Jaw-Yuan Wang
  • + 2 authors

Personalized treatments based on the genetic profiles of tumors can simultaneously optimize efficacy and minimize toxicity, which is beneficial for improving patient outcomes. This study aimed to integrate gene alterations associated with predictive...

  • Article
  • Open Access
3 Citations
3,197 Views
13 Pages

Laminin 511-E8 Fragment Offers Superior Adhesion Properties for Gastric Cancer Cells Compared with Full-Length Laminin 511

  • Masaya Iwamuro,
  • Hidenori Shiraha,
  • Mayu Kobashi,
  • Shigeru Horiguchi and
  • Hiroyuki Okada

Background: The interaction between cancer cells and laminin (Ln) is a key event in tumor invasion and metastasis. Previously, we determined the effect of full-length Ln511 on gastric cancer cells. However, the interactions between the Ln511-E8 fragm...

  • Article
  • Open Access
11 Citations
3,287 Views
11 Pages

Oral cancer, a type of head and neck cancer, can pose a significant risk of death unless diagnosed and treated early. Alternative treatments are urgently needed owing to the high mortality rate, limitations of conventional treatments, and many compli...

  • Article
  • Open Access
19 Citations
5,642 Views
15 Pages

Ulcerative Colitis Seems to Imply Oral Microbiome Dysbiosis

  • Natalia Molinero,
  • Diego Taladrid,
  • Irene Zorraquín-Peña,
  • Miguel de Celis,
  • Ignacio Belda,
  • Alex Mira,
  • Begoña Bartolomé and
  • M. Victoria Moreno-Arribas

Ulcerative colitis (UC) is a recurrent pathology of complex etiology that has been occasionally associated with oral lesions, but the overall composition of the oral microbiome in UC patients and its role in the pathogenesis of the disease are still...

  • Article
  • Open Access
2 Citations
3,271 Views
16 Pages

Mesenchymal stem cells (MSCs) have been widely applied to the regeneration of damaged tissue and the modulation of immune response. The purity of MSC preparation and the delivery of MSCs to a target region are critical factors for success in therapeu...

  • Article
  • Open Access
5 Citations
2,931 Views
9 Pages

Sodium iodide symporter (NIS) expression in thyroid follicular cells plays an important role in normal physiology and radioactive iodine therapy for thyroid cancer. Loss of NIS expression is often seen in thyroid cancers and may lead to radioiodine r...

  • Article
  • Open Access
16 Citations
5,078 Views
9 Pages

GCEN: An Easy-to-Use Toolkit for Gene Co-Expression Network Analysis and lncRNAs Annotation

  • Wen Chen,
  • Jing Li,
  • Shulan Huang,
  • Xiaodeng Li,
  • Xuan Zhang,
  • Xiang Hu,
  • Shuanglin Xiang and
  • Changning Liu

Gene co-expression network analysis has been widely used in gene function annotation, especially for long noncoding RNAs (lncRNAs). However, there is a lack of effective cross-platform analysis tools. For biologists to easily build a gene co-expressi...

  • Article
  • Open Access
8 Citations
5,717 Views
7 Pages

Next-Generation Sequencing of Connective Tissue Genes in Patients with Classical Ehlers-Danlos Syndrome

  • Anna Junkiert-Czarnecka,
  • Maria Pilarska-Deltow,
  • Aneta Bąk,
  • Marta Heise,
  • Anna Latos-Bieleńska,
  • Jacek Zaremba,
  • Alicja Bartoszewska-Kubiak and
  • Olga Haus

Background: Ehlers-Danlos syndrome (EDS) is a common non-inflammatory, congenital connective tissue disorder. Classical type (cEDS) EDS is one of the more common forms, typically caused by mutations in the COL5A1 and COL5A2 genes, though causative mu...

  • Article
  • Open Access
22 Citations
5,849 Views
9 Pages

sBCMA Plasma Level Dynamics and Anti-BCMA CAR-T-Cell Treatment in Relapsed Multiple Myeloma

  • Katja Seipel,
  • Naomi Porret,
  • Gertrud Wiedemann,
  • Barbara Jeker,
  • Vera Ulrike Bacher and
  • Thomas Pabst

BACKGROUND: Novel chimeric antigen receptor T-cells (CAR-T) target the B-cell maturation antigen (BCMA) expressed on multiple myeloma cells. Assays monitoring CAR-T cell expansion and treatment response are being implemented in clinical routine. METH...

  • Article
  • Open Access
13 Citations
5,176 Views
11 Pages

Excessive Folic Acid Mimics Folate Deficiency in Human Lymphocytes

  • Khadijah I. Alnabbat,
  • Ali M. Fardous,
  • Diane C. Cabelof and
  • Ahmad R. Heydari

Food fortification with synthetic folic acid (FA), along with supplementation, results in a marked increase in the population total of serum folates and unmetabolized folic acid (UMFA). Despite the success in reducing neural tube defects at birth in...

  • Review
  • Open Access
77 Citations
15,612 Views
18 Pages

The role of the microbiota–gut–brain (MGB) axis in mood regulation and depression treatment has gained attention in recent years, as evidenced by the growing number of animal and human studies that have reported the anti-depressive and as...

  • Article
  • Open Access
4 Citations
3,554 Views
17 Pages

Group Theory of Syntactical Freedom in DNA Transcription and Genome Decoding

  • Michel Planat,
  • Marcelo M. Amaral,
  • Fang Fang,
  • David Chester,
  • Raymond Aschheim and
  • Klee Irwin

Transcription factors (TFs) are proteins that recognize specific DNA fragments in order to decode the genome and ensure its optimal functioning. TFs work at the local and global scales by specifying cell type, cell growth and death, cell migration, o...

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Curr. Issues Mol. Biol. - ISSN 1467-3045