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Genes, Volume 10, Issue 4

April 2019 - 71 articles

Cover Story: Lupins are legumes that are diverse and geographically widespread mainly around Mediterranean basin and both Americas. European lupins also exhibit great variability in chromosome number (2n=32-52), the basic chromosome number (x=5-9, 13) and genome size (0.97 pg/2C to 2.44 pg/2C). Comparative BAC-FISH analyses highlighted chromosomes variations and its multiple rearrangements. We proposed along with phylogeny data, the model of lupin chromosome evolution through three round of whole genome duplication, with assistance to aneuploidy. We assume the basic chromosome number as x=6, that is considered also for American lupins. The outstanding complex genome evolution makes lupin fascinating model for evolutionary studies. Polyploidy may provide an privilege in domestication, thus development of fundamental (cyto)genetic is a crucial to utilisate lupins in modern plant improvement. View this paper.
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Articles (71)

  • Article
  • Open Access
15 Citations
5,853 Views
11 Pages

Novel Y Chromosome Retrocopies in Canids Revealed through a Genome-Wide Association Study for Sex

  • Kate L. Tsai,
  • Jacquelyn M. Evans,
  • Rooksana E. Noorai,
  • Alison N. Starr-Moss and
  • Leigh Anne Clark

25 April 2019

The lack of an annotated reference sequence for the canine Y chromosome has limited evolutionary studies, as well as our understanding of the role of Y-linked sequences in phenotypes with a sex bias. In genome-wide association studies (GWASs), we obs...

  • Review
  • Open Access
33 Citations
6,021 Views
10 Pages

25 April 2019

microRNAs regulate gene expression by blocking the translation of mRNAs and/or promoting their degradation. They, therefore, play important roles in gene regulatory networks (GRNs) by modulating the expression levels of specific genes and can tune GR...

  • Article
  • Open Access
8 Citations
4,980 Views
12 Pages

MicroRNAs Mediated Regulation of Expression of Nucleoside Analog Pathway Genes in Acute Myeloid Leukemia

  • Neha S. Bhise,
  • Abdelrahman H. Elsayed,
  • Xueyuan Cao,
  • Stanley Pounds and
  • Jatinder K. Lamba

24 April 2019

Nucleoside analog, cytarabine (ara-C) is the mainstay of acute myeloid leukemia (AML) chemotherapy. Cytarabine and other nucleoside analogs require activation to the triphosphate form (ara-CTP). Intracellular ara-CTP levels demonstrate significant in...

  • Review
  • Open Access
61 Citations
15,379 Views
17 Pages

24 April 2019

Telomeric repeats, coated by the shelterin complex, prevent inappropriate activation of the DNA damage response at the ends of linear chromosomes. Shelterin has evolved distinct solutions to protect telomeres from different aspects of the DNA damage...

  • Article
  • Open Access
37 Citations
5,530 Views
11 Pages

The Biochemical Role of the Human NEIL1 and NEIL3 DNA Glycosylases on Model DNA Replication Forks

  • Mustafa S. Albelazi,
  • Peter R. Martin,
  • Soran Mohammed,
  • Luciano Mutti,
  • Jason L. Parsons and
  • Rhoderick H. Elder

23 April 2019

Endonuclease VIII-like (NEIL) 1 and 3 proteins eliminate oxidative DNA base damage and psoralen DNA interstrand crosslinks through initiation of base excision repair. Current evidence points to a DNA replication associated repair function of NEIL1 an...

  • Article
  • Open Access
15 Citations
5,609 Views
25 Pages

Mitochondrial Introgression, Color Pattern Variation, and Severe Demographic Bottlenecks in Three Species of Malagasy Poison Frogs, Genus Mantella

  • Angelica Crottini,
  • Pablo Orozco-terWengel,
  • Falitiana C. E. Rabemananjara,
  • J. Susanne Hauswaldt and
  • Miguel Vences

23 April 2019

Madagascar is a biodiversity hotspot particularly rich in amphibian diversity and only a few charismatic Malagasy amphibians have been investigated for their population-level differentiation. The Mantella madagascariensis group is composed of two rai...

  • Article
  • Open Access
17 Citations
4,590 Views
17 Pages

23 April 2019

In maize, pyramiding of o2 and o16 alleles can greatly improve the nutritional quality of grains. To dissect its molecular mechanism, we created a double recessive mutant line, o2o2o16o16, by introgression of the o2 and o16 alleles into the wild-type...

  • Article
  • Open Access
12 Citations
5,425 Views
18 Pages

Systematic Identification and Evolution Analysis of Sox Genes in Coturnix japonica Based on Comparative Genomics

  • Lan Jiang,
  • De Bi,
  • Hengwu Ding,
  • Xuan Wu,
  • Ran Zhu,
  • Juhua Zeng,
  • Xiaojun Yang and
  • Xianzhao Kan

22 April 2019

Coturnix japonica (Japanese quail) has been extensively used as a model animal for biological studies. The Sox gene family, which was systematically characterized by a high-mobility group (HMG-box) in many animal species, encodes transcription factor...

  • Review
  • Open Access
16 Citations
6,007 Views
13 Pages

21 April 2019

Plants are exposed to diverse abiotic and biotic stimuli. These require fast and specific integrated responses. Such responses are coordinated at the protein and transcript levels and are incorporated into larger regulatory networks. Here, we focus o...

  • Article
  • Open Access
5 Citations
3,353 Views
14 Pages

A Novel Aquaporin 12-like Protein from Chilo suppressalis: Characterization and Functional Analysis

  • Ming-Xing Lu,
  • Jie Song,
  • Jing Xu,
  • Guirong Wang,
  • Yang Liu and
  • Yu-Zhou Du

21 April 2019

Aquaporins (AQPs), which are members of the major intrinsic protein (MIP) family, play an important role in the transport of water and other small, uncharged solutes across membranes. In this study, we identified gene encoding two aquaporin 12-like (...

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Genes - ISSN 2073-4425