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Advances in Supramolecular Chemistry

A special issue of Molecules (ISSN 1420-3049). This special issue belongs to the section "Chemical Biology".

Deadline for manuscript submissions: closed (30 December 2019) | Viewed by 15229

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Departament de Química Inorgànica i Orgànica, Secció de Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
Interests: supramolecular chemistry; luminescence; gold; platinum; organometallic
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Special Issue Information

Dear Colleagues,

Supramolecular chemistry is the domain of chemistry beyond molecules, focusing on the chemical systems made up of a discrete number of assembled molecular subunits or components. Numerous examples exist, whereby weak interactions, such as hydrogen bonding, van der Waals, π–π stacking, dipole–dipole and metal coordination, direct the organization of the resulting self-assembled structures giving rise to complex architectures with a large number of potential applications from mimetic vital functions, materials technology, sensing, molecular recognition, catalysis, photo-/electro-chemically active units, imprinting, molecular machines, etc.

The importance of this field has been demonstrated, with several Nobel prizes in the area (Lehn, Cram, Pedersen in 1987 and Sauvage, Feringa, Stoddart in 2017), and is currently a subject of research in a wide number of worldwide research groups with organic, inorganic, photophysical, electrochemical and nanomaterials expertise.

The present Special Issue will cover some of the recent aspects of supramolecular chemistry, showing the different variety of systems involved in this field as well as their novel applications. 

Prof. Dr. Laura Rodríguez
Guest Editor

Manuscript Submission Information

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Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Molecules is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • supramolecular
  • weak interactions
  • assemblies
  • applications
  • molecular recognition

Published Papers (5 papers)

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Research

11 pages, 2199 KiB  
Article
Luminescent Tetranuclear Gold(I) Dibenzo[g,p]chrysene Derivatives: Effect of the Environment on Photophysical Properties
by Francisco J. Caparrós, Mani Outis, Yongsik Jung, Hyeonho Choi, João Carlos Lima and Laura Rodríguez
Molecules 2020, 25(4), 949; https://doi.org/10.3390/molecules25040949 - 20 Feb 2020
Cited by 3 | Viewed by 2463
Abstract
A new 2,7,10,15-tetraethynyldibenzo[g,p]chrysene ligand (1) and two tetranuclear gold(I) derivatives containing PPh3 (3) and PMe3 (4) phosphines were synthesized and characterized by 1H and 31P NMR, IR spectroscopy, and high-resolution mass spectrometry. The [...] Read more.
A new 2,7,10,15-tetraethynyldibenzo[g,p]chrysene ligand (1) and two tetranuclear gold(I) derivatives containing PPh3 (3) and PMe3 (4) phosphines were synthesized and characterized by 1H and 31P NMR, IR spectroscopy, and high-resolution mass spectrometry. The compounds were studied in order to analyze the effect of the introduction of gold(I) on the supramolecular aggregation and photophysical properties. Absorption and emission spectra displayed broad bands due to the establishment of π π interactions as an indication of intermolecular contacts and the formation of aggregates. A decrease of the recorded quantum yield (QY) of the gold(I) derivatives was observed compared to the uncomplexed ligand. The introduction of the complexes into poly methyl methacrylate (PMMA) and Zeonex 480R matrixes was analyzed, and an increase of the measured QY of 4 in Zeonex was observed. No phosphorescent emission was detected. Full article
(This article belongs to the Special Issue Advances in Supramolecular Chemistry)
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7 pages, 695 KiB  
Article
Supramolecular and Liquid Crystalline Contributions to the Assembly of Myofibril
by Alberto Ciferri and Alvin L. Crumbliss
Molecules 2020, 25(4), 862; https://doi.org/10.3390/molecules25040862 - 15 Feb 2020
Cited by 2 | Viewed by 2138
Abstract
We compare steps observed during the fibrillogenesis of myofibrils with the sequence of steps predictable by a recent analysis of the structurization and functioning of striated muscles. The predicted assembly steps are based solely on fundamental equilibrium processes, particularly supramolecular interactions and liquid [...] Read more.
We compare steps observed during the fibrillogenesis of myofibrils with the sequence of steps predictable by a recent analysis of the structurization and functioning of striated muscles. The predicted assembly steps are based solely on fundamental equilibrium processes, particularly supramolecular interactions and liquid crystalline alignment of the rigid thick and thin filaments hosted within the sarcomer. Satisfactory agreement is obtained between several of the observed and the predicted fibrillogenesis steps. In several cases, however, the actual steps appear to be more complex than expected, evidencing the occurrence of transport and kinetic pathways that may assist the attainment of the equilibrium structure. The memory of the order of a precursor mesophase is imprinted during the remodeling of the surfaces at which the two sets of filaments are anchored. The relevance of the present analysis to the functioning of the myofibril is considered. Full article
(This article belongs to the Special Issue Advances in Supramolecular Chemistry)
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16 pages, 4935 KiB  
Article
Redox-Active Monolayers Self-Assembled on Gold Electrodes—Effect of Their Structures on Electrochemical Parameters and DNA Sensing Ability
by Kamila Malecka, Shalini Menon, Gopal Palla, Krishnapillai Girish Kumar, Mathias Daniels, Wim Dehaen, Hanna Radecka and Jerzy Radecki
Molecules 2020, 25(3), 607; https://doi.org/10.3390/molecules25030607 - 30 Jan 2020
Cited by 4 | Viewed by 3438
Abstract
The background: The monolayers self-assembled on the gold electrode incorporated transition metal complexes can act both as receptor (“host” molecules) immobilization sites, as well as transducer for interface recognitions of “guest” molecules present in the aqueous solutions. Their electrochemical parameters influencing the sensing [...] Read more.
The background: The monolayers self-assembled on the gold electrode incorporated transition metal complexes can act both as receptor (“host” molecules) immobilization sites, as well as transducer for interface recognitions of “guest” molecules present in the aqueous solutions. Their electrochemical parameters influencing the sensing properties strongly depend on the transition metal complex structures. The objectives: The electrochemical characterization of the symmetric terpyridine–M2+–terpyridine and asymmetric dipyrromethene–M2+–terpyridine complexes modified with ssDNA probe covalently attached to the gold electrodes and exploring their ssDNA sensing ability were the main aims of the research presented. The methods: Two transition metal cations have been selected: Cu2+ and Co2+ for creation of redox-active monolayers. The electron transfer coefficients indicating the reversibility and electron transfer rate constant measuring kinetic of redox reactions have been determined for all SAMs studied using: Cyclic Voltammetry, Osteryoung Square-Wave Voltammetry, and Differential Pulse Voltammetry. All redox-active platforms have been applied for immobilization of ssDNA probe. Next, their sensing properties towards complementary DNA target have been explored electrochemically. The results: All SAMs studied were stable displaying quasi-reversible redox activity. The linear relationships between cathodic and anodic current vs. san rate were obtained for both symmetric and asymmetric SAMs incorporating Co2+ and Cu2+, indicating that oxidized and reduced redox sites are adsorbed on the electrode surface. The ssDNA sensing ability were observed in the fM concentration range. The low responses towards non-complementary ssDNA sequences provided evidences for sensors good selectivity. The conclusions: All redox-active SAMs modified with a ssDNA probe were suitable for sensing of ssDNA target, with very good sensitivity in fM range and very good selectivity. The detection limits obtained for SAMs incorporating Cu2+, both symmetric and asymmetric, were better in comparison to SAMs incorporating Co2+. Thus, selection of the right transition metal cation has stronger influence on ssDNA sensing ability, than complex structures. Full article
(This article belongs to the Special Issue Advances in Supramolecular Chemistry)
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11 pages, 3666 KiB  
Article
Exploring the Self-Assembled Tacticity in Aurophilic Polymeric Arrangements of Diphosphanegold(I) Fluorothiolates
by Guillermo Moreno-Alcántar, Laura Salazar, Guillermo Romo-Islas, Marcos Flores-Álamo and Hugo Torrens
Molecules 2019, 24(23), 4422; https://doi.org/10.3390/molecules24234422 - 03 Dec 2019
Cited by 5 | Viewed by 2845
Abstract
Despite the recurrence of aurophilic interactions in the solid-state structures of gold(I) compounds, its rational control, modulation, and application in the generation of functional supramolecular structures is an area that requires further development. The ligand effects over the aurophilic-based supramolecular structures need to [...] Read more.
Despite the recurrence of aurophilic interactions in the solid-state structures of gold(I) compounds, its rational control, modulation, and application in the generation of functional supramolecular structures is an area that requires further development. The ligand effects over the aurophilic-based supramolecular structures need to be better understood. This paper presents the supramolecular structural diversity of a series of new 1,3-bis(diphenylphosphane)propane (dppp) gold(I) fluorinated thiolates with the general formula [Au2(SRF)2(μ-dppp)] (SRF = SC6F5 (1); SC6HF4-4 (2); SC6H3(CF3)2-3,5 (3); SC6H4CF3-2 (4); SC6H4CF3-4 (5); SC6H3F2-3,4 (6); SC6H3F2-3,5 (7); SC6H4F-2 (8); SC6H4F-3 (9); SC6H4F-4 (10)). These compounds were synthesized and characterized, and six of their solid-state crystalline structures were determined using single-crystal X-ray diffraction. In the crystalline arrangement, they form aurophilic-bridged polymers. In these systems, the changes in the fluorination patterns of the thiolate ligands tune the aurophilic-induced self-assembly of the compounds causing tacticity and chiral differentiation of the monomers. This is an example of the use of ligand effects on the tune of the supramolecular association of gold complexes. Full article
(This article belongs to the Special Issue Advances in Supramolecular Chemistry)
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19 pages, 4924 KiB  
Article
A New Heterogeneous Catalyst Obtained via Supramolecular Decoration of Graphene with a Pd2+ Azamacrocyclic Complex
by Matteo Savastano, Paloma Arranz-Mascarós, Maria Paz Clares, Rafael Cuesta, Maria Luz Godino-Salido, Lluis Guijarro, Maria Dolores Gutiérrez-Valero, Mario Inclán, Antonio Bianchi, Enrique García-España and Rafael López-Garzón
Molecules 2019, 24(15), 2714; https://doi.org/10.3390/molecules24152714 - 26 Jul 2019
Cited by 18 | Viewed by 3321
Abstract
A new G-(H2L)-Pd heterogeneous catalyst has been prepared via a self-assembly process consisting in the spontaneous adsorption, in water at room temperature, of a macrocyclic H2L ligand on graphene (G) (G + H2L = G-(H2L)), [...] Read more.
A new G-(H2L)-Pd heterogeneous catalyst has been prepared via a self-assembly process consisting in the spontaneous adsorption, in water at room temperature, of a macrocyclic H2L ligand on graphene (G) (G + H2L = G-(H2L)), followed by decoration of the macrocycle with Pd2+ ions (G-(H2L) + Pd2+ = G-(H2L)-Pd) under the same mild conditions. This supramolecular approach is a sustainable (green) procedure that preserves the special characteristics of graphene and furnishes an efficient catalyst for the Cu-free Sonogashira cross coupling reaction between iodobenzene and phenylacetylene. Indeed, G-(H2L)-Pd shows an excellent conversion (90%) of reactants into diphenylacetylene under mild conditions (50 °C, water, aerobic atmosphere, 14 h). The catalyst proved to be reusable for at least four cycles, although decreasing yields down to 50% were observed. Full article
(This article belongs to the Special Issue Advances in Supramolecular Chemistry)
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