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Metabolites in Plants—Biosynthesis, Regulation, Evolution, and Application

A special issue of Molecules (ISSN 1420-3049). This special issue belongs to the section "Metabolites".

Deadline for manuscript submissions: closed (31 October 2022) | Viewed by 2388

Special Issue Editors


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Guest Editor
Joint Center in Single Cell Biology; Shanghai Collaborative Innovation Center of Agri-Seeds, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
Interests: plant natural product; metabolic diversity; biosynthetic gene cluster; synthetic biology; plant interaction
School of Agriculture and Biology, Fudan-SJTU-Nottingham Plant Biotechnology R&D Center, Shanghai Jiao Tong University, Shanghai 200240, China
Interests: transcriptional regulation; terpenoids biosynthesis; glandular trichome; plant metabolic engineering
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Guest Editor Assistant
Department of Biochemistry and Metabolism, John Innes Centre, Norwich, UK
Interests: plant metabolic engineering; phytonutrients; transcriptional regulation; plant secondary metabolism

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Guest Editor Assistant
Earlham Institute, Norwich Research Park (NRP), Norwich, UK
Interests: synthetic biology; promoter; transcription factor; laboratory automation; genetic circuit; endoplasmic reticulum stress; unfolded protein response

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Guest Editor Assistant
Department of Biochemistry and Metabolism, John Innes Centre, Norwich, UK
Interests: plant natural product; specialized metabolism; metabolic engineering; biosynthetic gene cluster; synthetic biology; plant-pathogen interaction

Special Issue Information

Dear Colleagues,

Plants have evolved complex metabolic systems that produce 105–106 functionally and structurally diverse metabolites. These molecules not only play important roles in plant growth and development but also enable plants to survive and thrive amid various environmental or ecological challenges. Moreover, the diversity of plant metabolites provides an exceptional source to meet the unmet demand for chemical novelty and innovation in the pharmaceutical, agriculture, food, and other industries.

In past decades, the rapid development of technologies has significantly advanced our understanding of plant metabolism. Understanding how and why plants have evolved this astounding metabolic diversity requires comprehensive research on their biosynthesis, spatial and temporal regulation, cell/tissue specific distribution, transport, and interaction with other organisms. The multi-omics era has brought an unprecedented opportunity to decipher the evolutionary mechanisms underlying plant chemical diversity at intra- and interspecies levels. Advances in fundamental knowledge will in turn promote the broader application of plant metabolites via metabolic engineering or synthetic biology.

In this Special Issue, we welcome original research, method, or review papers that cover but are not limited to the following topics:

- Analysis and bioactivity of plant metabolites;

- Isolation and identification of natural compounds;

- Multi-omics studies for discovery and characterization of biosynthetic pathways;

- Novel mechanisms in regulation of plant metabolic pathways;

- Mechanisms of differential distribution and transport of metabolites across different cell/tissue types.

- Metabolites involved in interactions between plants and other organisms;

- Evolutionary mechanisms underpinning metabolic diversity in plants;

- Novel synthetic biology approaches for production of naturally occurring plant metabolites or synthetic derivatives of these metabolites.

Dr. Zhenhua Liu
Dr. Qian Shen
Guest Editors

Dr. Jie Li
Dr. Yaomin Cai
Dr. Guy Polturak
Guest Editor Assistants

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Molecules is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • natural products
  • specialized metabolites
  • regulatory mechanism
  • biosynthetic pathway
  • metabolic diversity
  • plant interactions
  • multi-omics
  • evolution of metabolism

Published Papers (1 paper)

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18 pages, 4475 KiB  
Essay
Flavonoid Metabolism in Tetrastigma hemsleyanum Diels et Gilg Based on Metabolome Analysis and Transcriptome Sequencing
by Yan Bai, Lingtai Jiang, Zhe Li, Shouzan Liu, Xiaotian Hu and Fei Gao
Molecules 2023, 28(1), 83; https://doi.org/10.3390/molecules28010083 - 22 Dec 2022
Cited by 7 | Viewed by 1665
Abstract
Tetrastigma hemsleyanum Diels et Gilg, known as a “plant antibiotic”, possesses several attractive properties including anti-inflammatory, anti-tumor, and antioxidant effects, with its efficacy being attributed to flavonoids. However, the flavonoid biosynthesis of T. hemsleyanum has rarely been studied. In this study, we investigated [...] Read more.
Tetrastigma hemsleyanum Diels et Gilg, known as a “plant antibiotic”, possesses several attractive properties including anti-inflammatory, anti-tumor, and antioxidant effects, with its efficacy being attributed to flavonoids. However, the flavonoid biosynthesis of T. hemsleyanum has rarely been studied. In this study, we investigated the flavonoid metabolism of T. hemsleyanum through metabolome analysis and transcriptome sequencing. The metabolomic results showed differences in the flavonoids of the leaves and root tubers of T. hemsleyanum. A total of 22 flavonoids was detected, and the concentrations of most flavonoids in the leaves were higher than those in the root tubers. Transcriptome analysis revealed that differentially expressed genes (DEGs) in the leaves and root tubers were enriched in photosynthesis-antenna proteins. Pearson correlation analysis indicated that the expression levels of chalcone isomerase (CHI) and UDP-glycose flavonoid glycosyltransferase (UFGT) were highly correlated with the concentrations of most flavonoids. Further, this study found that the photosynthesis-antenna proteins essentially contributed to the difference in the flavonoids in T. hemsleyanum. The gene expressions and concentrations of the total flavonoids of leaves and root tubers in Hangzhou, Jinhua, Lishui, and Taizhou in Zhejiang Province, China, showed that CHI (CL6715.Contig1_All, Unigene19431_All, CL921.Contig4_All) and UFGT (CL11556.Contig3_All, CL11775.Contig1_All) were the potential key genes of accumulation of most flavonoids in T. hemsleyanum. Full article
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