Selective Vulnerability in Neurodegenerative Diseases

A special issue of Biology (ISSN 2079-7737).

Deadline for manuscript submissions: closed (1 February 2023) | Viewed by 35020

Special Issue Editor


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Guest Editor
Wallenberg Center for Molecular Medicine, Department of Biomedical and Clinical Sciences, Linköping University, SE-581 83 Linköping, Sweden
Interests: fatal familial insomnia; Huntington’s disease; genome manipulation; gene expression; translation

Special Issue Information

Dear Colleagues,

Neurodegenerative diseases, such as Alzheimer’s and Parkinson’s disease, are widely thought to be caused by misfolding, and eventually aggregation, of proteins that are widely expressed in the central nervous system.  For poorly understood reasons, neurodegenerative diseases tend to target specific brain regions but leave others relatively unscathed, a feature known as selective vulnerability. If we can determine how resistant regions avoid disease, transferring their secrets to vulnerable regions may slow disease progression.

I am pleased to invite you to submit an article to this Special Issue on “Selective Vulnerability in

Neurodegenerative Diseases”. Articles may be focused at the cellular, regional, or network levels, but exploration of multiple levels is highly desired. Critical comparisons of human diseases and the related cell and animal models are also desired. Any neurodegenerative disease involving protein misfolding, including Alzheimer’s, Parkinson’s, Huntington’s and related polyglutamine diseases, prion diseases, tauopathies, synucleinopathies, amyotrophic lateral sclerosis, etc., may be included. 

This Special Issue aims to consolidate what is currently known about selective vulnerability, what remains to be learned, and what technical or experimental barriers are holding us back. In this Special Issue, original research and review articles are welcome. Research areas may include (but are not limited to) in vivo imaging, neuropathology, behavior, genomics, proteomics, transcriptomics, and modelling. I look forward to receiving your contributions.

Sincerely,

Dr. Walker Jackson
Guest Editor

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Keywords

  • Alzheimer’s disease
  • Parkinson’s disease
  • multiple system atrophy
  • amyotrophic lateral sclerosis
  • prion disease
  • Huntington’s disease
  • tauopathy
  • synucleinopathy
  • aging
  • neurodegeneration

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Published Papers (8 papers)

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Research

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11 pages, 2174 KiB  
Article
Susceptibility of Beavers to Chronic Wasting Disease
by Allen Herbst, Serene Wohlgemuth, Jing Yang, Andrew R. Castle, Diana Martinez Moreno, Alicia Otero, Judd M. Aiken, David Westaway and Debbie McKenzie
Biology 2022, 11(5), 667; https://doi.org/10.3390/biology11050667 - 26 Apr 2022
Cited by 1 | Viewed by 5250
Abstract
Chronic wasting disease (CWD) is a contagious, fatal, neurodegenerative prion disease of cervids. The expanding geographical range and rising prevalence of CWD are increasing the risk of pathogen transfer and spillover of CWD to non-cervid sympatric species. As beavers have close contact with [...] Read more.
Chronic wasting disease (CWD) is a contagious, fatal, neurodegenerative prion disease of cervids. The expanding geographical range and rising prevalence of CWD are increasing the risk of pathogen transfer and spillover of CWD to non-cervid sympatric species. As beavers have close contact with environmental and food sources of CWD infectivity, we hypothesized that they may be susceptible to CWD prions. We evaluated the susceptibility of beavers to prion diseases by challenging transgenic mice expressing beaver prion protein (tgBeaver) with five strains of CWD, four isolates of rodent-adapted prions and one strain of Creutzfeldt–Jakob disease. All CWD strains transmitted to the tgBeaver mice, with attack rates highest from moose CWD and the 116AG and H95+ strains of deer CWD. Mouse-, rat-, and especially hamster-adapted prions were also transmitted with complete attack rates and short incubation periods. We conclude that the beaver prion protein is an excellent substrate for sustaining prion replication and that beavers are at risk for CWD pathogen transfer and spillover. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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13 pages, 1980 KiB  
Article
Selective Loss of MATR3 in Spinal Interneurons, Upper Motor Neurons and Hippocampal CA1 Neurons in a MATR3 S85C Knock-In Mouse Model of Amyotrophic Lateral Sclerosis
by Justin You, Katarina Maksimovic, Jooyun Lee, Mashiat Khan, Rintaro Masuda and Jeehye Park
Biology 2022, 11(2), 298; https://doi.org/10.3390/biology11020298 - 12 Feb 2022
Cited by 7 | Viewed by 3859
Abstract
The neuropathological hallmark of amyotrophic lateral sclerosis (ALS) is motor neuron degeneration in the spinal cord and cortex. Accumulating studies report that other neurons in the central nervous system (CNS) are also affected in ALS. Mutations in Matr3, which encodes a nuclear [...] Read more.
The neuropathological hallmark of amyotrophic lateral sclerosis (ALS) is motor neuron degeneration in the spinal cord and cortex. Accumulating studies report that other neurons in the central nervous system (CNS) are also affected in ALS. Mutations in Matr3, which encodes a nuclear matrix protein involved in RNA splicing, have been linked to ALS. Previously, we generated a MATR3 S85C knock-in (KI) mouse model that recapitulates early-stage features of ALS. We reported that MATR3 S85C KI mice exhibit defects in lumbar spinal cord motor neurons and in cerebellar Purkinje cells, which are associated with reduced MATR3 immunoreactivity. Here, we show that neurons in various other regions of the CNS are affected in MATR3 S85C KI mice. Using histological analyses, we found selective loss of MATR3 staining in α-motor neurons, but not γ-motor neurons in the cervical and thoracic spinal cord. Loss of MATR3 was also found in parvalbumin-positive interneurons in the cervical, thoracic and lumbar spinal cord. In addition, we found the loss of MATR3 in subsets of upper motor neurons and hippocampal CA1 neurons. Collectively, our findings suggest that these additional neuronal types may contribute to the disease process in MATR3 S85C KI mice. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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Review

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22 pages, 1931 KiB  
Review
Selective Vulnerability to Neurodegenerative Disease: Insights from Cell Type-Specific Translatome Studies
by Walker S. Jackson, Susanne Bauer, Lech Kaczmarczyk and Srivathsa S. Magadi
Biology 2024, 13(2), 67; https://doi.org/10.3390/biology13020067 - 23 Jan 2024
Cited by 2 | Viewed by 2711
Abstract
Neurodegenerative diseases (NDs) manifest a wide variety of clinical symptoms depending on the affected brain regions. Gaining insights into why certain regions are resistant while others are susceptible is vital for advancing therapeutic strategies. While gene expression changes offer clues about disease responses [...] Read more.
Neurodegenerative diseases (NDs) manifest a wide variety of clinical symptoms depending on the affected brain regions. Gaining insights into why certain regions are resistant while others are susceptible is vital for advancing therapeutic strategies. While gene expression changes offer clues about disease responses across brain regions, the mixture of cell types therein obscures experimental results. In recent years, methods that analyze the transcriptomes of individual cells (e.g., single-cell RNA sequencing or scRNAseq) have been widely used and have provided invaluable insights into specific cell types. Concurrently, transgene-based techniques that dissect cell type-specific translatomes (CSTs) in model systems, like RiboTag and bacTRAP, offer unique advantages but have received less attention. This review juxtaposes the merits and drawbacks of both methodologies, focusing on the use of CSTs in understanding conditions like amyotrophic lateral sclerosis (ALS), Huntington’s disease (HD), Alzheimer’s disease (AD), and specific prion diseases like fatal familial insomnia (FFI), genetic Creutzfeldt–Jakob disease (gCJD), and acquired prion disease. We conclude by discussing the emerging trends observed across multiple diseases and emerging methods. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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13 pages, 535 KiB  
Review
Strain-Specific Targeting and Destruction of Cells by Prions
by Sara M. Simmons and Jason C. Bartz
Biology 2024, 13(1), 57; https://doi.org/10.3390/biology13010057 - 20 Jan 2024
Viewed by 2012
Abstract
Prion diseases are caused by the disease-specific self-templating infectious conformation of the host-encoded prion protein, PrPSc. Prion strains are operationally defined as a heritable phenotype of disease under controlled conditions. One of the hallmark phenotypes of prion strain diversity is tropism [...] Read more.
Prion diseases are caused by the disease-specific self-templating infectious conformation of the host-encoded prion protein, PrPSc. Prion strains are operationally defined as a heritable phenotype of disease under controlled conditions. One of the hallmark phenotypes of prion strain diversity is tropism within and between tissues. A defining feature of prion strains is the regional distribution of PrPSc in the CNS. Additionally, in both natural and experimental prion disease, stark differences in the tropism of prions in secondary lymphoreticular system tissues occur. The mechanism underlying prion tropism is unknown; however, several possible hypotheses have been proposed. Clinical target areas are prion strain-specific populations of neurons within the CNS that are susceptible to neurodegeneration following the replication of prions past a toxic threshold. Alternatively, the switch from a replicative to toxic form of PrPSc may drive prion tropism. The normal form of the prion protein, PrPC, is required for prion formation. More recent evidence suggests that it can mediate prion and prion-like disease neurodegeneration. In vitro systems for prion formation have indicated that cellular cofactors contribute to prion formation. Since these cofactors can be strain specific, this has led to the hypothesis that the distribution of prion formation cofactors can influence prion tropism. Overall, there is evidence to support several mechanisms of prion strain tropism; however, a unified theory has yet to emerge. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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23 pages, 1873 KiB  
Review
The Contribution of the Locus Coeruleus–Noradrenaline System Degeneration during the Progression of Alzheimer’s Disease
by Dilek Mercan and Michael Thomas Heneka
Biology 2022, 11(12), 1822; https://doi.org/10.3390/biology11121822 - 14 Dec 2022
Cited by 13 | Viewed by 5575
Abstract
Alzheimer’s disease (AD), which is characterized by extracellular accumulation of amyloid-beta peptide and intracellular aggregation of hyperphosphorylated tau, is the most common form of dementia. Memory loss, cognitive decline and disorientation are the ultimate consequences of neuronal death, synapse loss and neuroinflammation in [...] Read more.
Alzheimer’s disease (AD), which is characterized by extracellular accumulation of amyloid-beta peptide and intracellular aggregation of hyperphosphorylated tau, is the most common form of dementia. Memory loss, cognitive decline and disorientation are the ultimate consequences of neuronal death, synapse loss and neuroinflammation in AD. In general, there are many brain regions affected but neuronal loss in the locus coeruleus (LC) is one of the earliest indicators of neurodegeneration in AD. Since the LC is the main source of noradrenaline (NA) in the brain, degeneration of the LC in AD leads to decreased NA levels, causing increased neuroinflammation, enhanced amyloid and tau burden, decreased phagocytosis and impairment in cognition and long-term synaptic plasticity. In this review, we summarized current findings on the locus coeruleus–noradrenaline system and consequences of its dysfunction which is now recognized as an important contributor to AD progression. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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34 pages, 2611 KiB  
Review
The Cell Autonomous and Non-Cell Autonomous Aspects of Neuronal Vulnerability and Resilience in Amyotrophic Lateral Sclerosis
by Christoph Schweingruber and Eva Hedlund
Biology 2022, 11(8), 1191; https://doi.org/10.3390/biology11081191 - 8 Aug 2022
Cited by 11 | Viewed by 5950
Abstract
Amyotrophic lateral sclerosis (ALS) is defined by the loss of upper motor neurons (MNs) that project from the cerebral cortex to the brain stem and spinal cord and of lower MNs in the brain stem and spinal cord which innervate skeletal muscles, leading [...] Read more.
Amyotrophic lateral sclerosis (ALS) is defined by the loss of upper motor neurons (MNs) that project from the cerebral cortex to the brain stem and spinal cord and of lower MNs in the brain stem and spinal cord which innervate skeletal muscles, leading to spasticity, muscle atrophy, and paralysis. ALS involves several disease stages, and multiple cell types show dysfunction and play important roles during distinct phases of disease initiation and progression, subsequently leading to selective MN loss. Why MNs are particularly vulnerable in this lethal disease is still not entirely clear. Neither is it fully understood why certain MNs are more resilient to degeneration in ALS than others. Brain stem MNs of cranial nerves III, IV, and VI, which innervate our eye muscles, are highly resistant and persist until the end-stage of the disease, enabling paralyzed patients to communicate through ocular tracking devices. MNs of the Onuf’s nucleus in the sacral spinal cord, that innervate sphincter muscles and control urogenital functions, are also spared throughout the disease. There is also a differential vulnerability among MNs that are intermingled throughout the spinal cord, that directly relate to their physiological properties. Here, fast-twitch fatigable (FF) MNs, which innervate type IIb muscle fibers, are affected early, before onset of clinical symptoms, while slow-twitch (S) MNs, that innervate type I muscle fibers, remain longer throughout the disease progression. The resilience of particular MN subpopulations has been attributed to intrinsic determinants and multiple studies have demonstrated their unique gene regulation and protein content in health and in response to disease. Identified factors within resilient MNs have been utilized to protect more vulnerable cells. Selective vulnerability may also, in part, be driven by non-cell autonomous processes and the unique surroundings and constantly changing environment close to particular MN groups. In this article, we review in detail the cell intrinsic properties of resilient and vulnerable MN groups, as well as multiple additional cell types involved in disease initiation and progression and explain how these may contribute to the selective MN resilience and vulnerability in ALS. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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27 pages, 1498 KiB  
Review
Regulating Phase Transition in Neurodegenerative Diseases by Nuclear Import Receptors
by Amandeep Girdhar and Lin Guo
Biology 2022, 11(7), 1009; https://doi.org/10.3390/biology11071009 - 4 Jul 2022
Cited by 7 | Viewed by 3763
Abstract
RNA-binding proteins (RBPs) with a low-complexity prion-like domain (PLD) can undergo aberrant phase transitions and have been implicated in neurodegenerative diseases such as ALS and FTD. Several nuclear RBPs mislocalize to cytoplasmic inclusions in disease conditions. Impairment in nucleocytoplasmic transport is another major [...] Read more.
RNA-binding proteins (RBPs) with a low-complexity prion-like domain (PLD) can undergo aberrant phase transitions and have been implicated in neurodegenerative diseases such as ALS and FTD. Several nuclear RBPs mislocalize to cytoplasmic inclusions in disease conditions. Impairment in nucleocytoplasmic transport is another major event observed in ageing and in neurodegenerative disorders. Nuclear import receptors (NIRs) regulate the nucleocytoplasmic transport of different RBPs bearing a nuclear localization signal by restoring their nuclear localization. NIRs can also specifically dissolve or prevent the aggregation and liquid–liquid phase separation of wild-type or disease-linked mutant RBPs, due to their chaperoning activity. This review focuses on the LLPS of intrinsically disordered proteins and the role of NIRs in regulating LLPS in neurodegeneration. This review also discusses the implication of NIRs as therapeutic agents in neurogenerative diseases. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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21 pages, 2577 KiB  
Review
Tau Post-Translational Modifications: Potentiators of Selective Vulnerability in Sporadic Alzheimer’s Disease
by Trae Carroll, Sanjib Guha, Keith Nehrke and Gail V. W. Johnson
Biology 2021, 10(10), 1047; https://doi.org/10.3390/biology10101047 - 15 Oct 2021
Cited by 20 | Viewed by 4299
Abstract
Sporadic Alzheimer’s Disease (AD) is the most common form of dementia, and its severity is characterized by the progressive formation of tau neurofibrillary tangles along a well-described path through the brain. This spatial progression provides the basis for Braak staging of the pathological [...] Read more.
Sporadic Alzheimer’s Disease (AD) is the most common form of dementia, and its severity is characterized by the progressive formation of tau neurofibrillary tangles along a well-described path through the brain. This spatial progression provides the basis for Braak staging of the pathological progression for AD. Tau protein is a necessary component of AD pathology, and recent studies have found that soluble tau species with selectively, but not extensively, modified epitopes accumulate along the path of disease progression before AD-associated insoluble aggregates form. As such, modified tau may represent a key cellular stressing agent that potentiates selective vulnerability in susceptible neurons during AD progression. Specifically, studies have found that tau phosphorylated at sites such as T181, T231, and S396 may initiate early pathological changes in tau by disrupting proper tau localization, initiating tau oligomerization, and facilitating tau accumulation and extracellular export. Thus, this review elucidates potential mechanisms through which tau post-translational modifications (PTMs) may simultaneously serve as key modulators of the spatial progression observed in AD development and as key instigators of early pathology related to neurodegeneration-relevant cellular dysfunctions. Full article
(This article belongs to the Special Issue Selective Vulnerability in Neurodegenerative Diseases)
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