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Aquac. J., Volume 2, Issue 2 (June 2022) – 7 articles

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17 pages, 5712 KiB  
Article
Immunoinformatic Approaches to Identify Immune Epitopes and Design an Epitope-Based Subunit Vaccine against Emerging Tilapia Lake Virus (TiLV)
by Sk Injamamul Islam, Sarower Mahfuj, Md. Ashraful Alam, Yeasmin Ara, Saloa Sanjida and Moslema Jahan Mou
Aquac. J. 2022, 2(2), 186-202; https://doi.org/10.3390/aquacj2020010 - 17 Jun 2022
Cited by 7 | Viewed by 2589
Abstract
Tilapia tilapinevirus, known worldwide as tilapia lake virus (TiLV), is a single-stranded RNA virus that belongs to the Amnoonviridae family. The virus attacks the fish species’ external and internal organs, such as the eyes, brain, and liver. Syncytial cells develop in the liver [...] Read more.
Tilapia tilapinevirus, known worldwide as tilapia lake virus (TiLV), is a single-stranded RNA virus that belongs to the Amnoonviridae family. The virus attacks the fish species’ external and internal organs, such as the eyes, brain, and liver. Syncytial cells develop in the liver cells of infected fish, which are characterized by widespread hepatocellular necrosis and karyolytic nuclei. It is a highly infectious virus that spreads both horizontally and vertically. Despite these devastating complications, there is still no cure or vaccine for the virus. Therefore, a vaccine based on epitopes developed using immunoinformatics methods was developed against TiLV in fish. The putative polymerase basic 1 (PB1) gene was used to identify immunodominant T- and B-cell epitopes. Three probable epitopes were used to design the vaccine: CTL, HTL, and LBL. Testing of the final vaccine revealed that it was antigenic, non-allergenic, and has improved solubility. Molecular dynamics simulation revealed significant structural compactness and binding stability. Furthermore, the computer-generated immunological simulation indicated that immunization might stimulate real-life immune responses following injection. Overall, the findings of the study imply that the designed epitope vaccine might be a good option for prophylaxis for TiLV. Full article
(This article belongs to the Special Issue Feature Papers in Aquaculture 2022)
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6 pages, 2607 KiB  
Article
Behavioral Response of Multiple Rainbow Trout to Vertically Suspended Environmental Enrichment
by Nathan Huysman, Michael Robidoux, Benj Morris, Jill M. Voorhees, Eric Krebs and Michael E. Barnes
Aquac. J. 2022, 2(2), 180-185; https://doi.org/10.3390/aquacj2020009 - 1 Jun 2022
Viewed by 1587
Abstract
Vertically suspended environmental enrichment improves the rearing performance of fish during aquaculture production, but the reason for this improvement is unclear. This study documented the behavior of groups of rainbow trout (Oncorhynchus mykiss), as indicated by their in-tank location preferences, in [...] Read more.
Vertically suspended environmental enrichment improves the rearing performance of fish during aquaculture production, but the reason for this improvement is unclear. This study documented the behavior of groups of rainbow trout (Oncorhynchus mykiss), as indicated by their in-tank location preferences, in response to vertically suspended structure. The location of both experienced and naïve fish (with or without prior exposure to vertically suspended enrichment) in both barren and enriched tanks was recorded. In-tank locations were significantly different for experienced fish in both barren and enriched tanks but were similar for naïve fish. When observations were combined for both the presence and absence of enrichment, naïve fish locations were significantly different from experienced fish. Locations were also significantly different for all fish in enriched compared to barren tanks. These results indicate that trout location is influenced by the presence of vertically suspended environmental enrichment and that learning from prior experience with enrichment occurs. Full article
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16 pages, 2612 KiB  
Article
Dynamics of Water and Biofilm Bacterial Community Composition in a Mediterranean Recirculation Aquaculture System
by Eirini Schoina, Agapi I. Doulgeraki, Helen Miliou and George-John E. Nychas
Aquac. J. 2022, 2(2), 164-179; https://doi.org/10.3390/aquacj2020008 - 18 May 2022
Cited by 7 | Viewed by 3439
Abstract
Recirculation technology has been emerging in the marine aquaculture industry. The microbiome developed in recirculation aquaculture systems (RASs) is an important factor for the optimal operation of these systems and fish welfare. In this study, the microbial community dynamics in the water column [...] Read more.
Recirculation technology has been emerging in the marine aquaculture industry. The microbiome developed in recirculation aquaculture systems (RASs) is an important factor for the optimal operation of these systems and fish welfare. In this study, the microbial community dynamics in the water column and the biofilms of a marine RAS with Mediterranean species of gilthead sea bream and sea bass were investigated, while physicochemical conditions were also monitored. Microbiological, culture, and non-culture analyses based on PCR-Denaturing Gradient Gel Electrophoresis (PCR-DGGE) fingerprints were performed on the water column and biofilm developed on stainless-steel surfaces. According to the obtained results, feed administration seemed to cause changes in pH and TAN, as well as drive changes in the bacterial abundance in the water column. Tested surfaces were colonized within 24 h and sessile cells were stabilized in terms of density within 6 days. DGGE fingerprints indicated the stability of the microbial community in water and a dynamic succession in the community of the biofilms. The fish pathogen Tenacibaculum discolor was found to colonize the biofilm and the water column. The main findings confirmed that RAS technology can be used as a control strategy for the stability of the water microbial community, that there is a dynamic succession of the dominant species in the biofilm communities, and that pathogenic bacteria can be dominant in the latter. Full article
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92 pages, 1298 KiB  
Conference Report
Report on the 6th Genomics in Aquaculture (GIA) Symposium Held in Granada, Spain, 4–6 May 2022
by Carmelo Ruiz-Rejón, Roberto de la Herrán, Rafael Navajas-Pérez and Francisca Robles
Aquac. J. 2022, 2(2), 72-163; https://doi.org/10.3390/aquacj2020007 - 16 May 2022
Viewed by 3099
Abstract
Infectious diseases represent one of the most pressing threats to modern aquaculture at a global scale [...] Full article
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13 pages, 320 KiB  
Article
Partial Substitution of Fishmeal with Mopane Worm Meal in Dusky Kob Fingerling (Argyrosomus japonicus) Diets: Feed Utilization, Digestive Enzyme Activity, Blood Parameters, and Growth Performance
by Tshegofatso C. Nyuliwe, Victor Mlambo, Molatelo J. Madibana, Mulunda Mwanza and Obiro C. Wokadala
Aquac. J. 2022, 2(2), 59-71; https://doi.org/10.3390/aquacj2020006 - 7 May 2022
Cited by 2 | Viewed by 2351
Abstract
The use of protein-rich mopane worm meal (MPWM) in marine fish diets has the potential to reduce the overall demand for fishmeal (FM) and thus promote economically and ecologically sustainable dusky kob aquaculture. Therefore, this study investigated the effect of graded levels of [...] Read more.
The use of protein-rich mopane worm meal (MPWM) in marine fish diets has the potential to reduce the overall demand for fishmeal (FM) and thus promote economically and ecologically sustainable dusky kob aquaculture. Therefore, this study investigated the effect of graded levels of MPWM on feed and nutrient utilization, digestive enzymes, blood parameters, and growth performance in dusky kob fingerlings (Argyrosomus japonicus, Temminck and Schlegel, 1843) over a 7-week feeding trial. Five isonitrogenous and isoenergetic commercial dusky kob diets were formulated by substituting 0 (MPWM0), 3 (MPWM3), 6 (MPWM6), 9 (MPWM9), and 18% (MPWM18) of FM with MPWM and offered at 2.8% of fish body weight. Two-thousand fingerlings (average weight 15.68 ± 0.25 g) were evenly distributed into 20 experimental tanks of a recirculating aquaculture system. Weight measurements were taken weekly, while blood and intestinal samples were taken at the end of the experiment. The inclusion of MPWM quadratically influenced (y = 39.25 (±1.27) + 0.89 (±0.36)x − 0.04 (0.02) x2; R2 = 0.23; p = 0.03) overall feed intake. Overall weight gain and specific growth rate (SGR) linearly increased while overall feed conversion ratio (FCR) linearly declined with MPWM inclusion levels. Substituting FM with MPWM did not alter (p > 0.05) digestive enzyme activities and haematological parameters. Among the serum biochemical components measured, only urea increased linearly in response to MPWM levels, while no trends were observed for the other components. It was concluded that replacing 11.13% of FM with MPWM in commercial dusky kob diet formulations does not compromise feed intake, feed utilization efficiency, growth rate, and physiological status of juvenile dusky kob. Full article
8 pages, 497 KiB  
Communication
High Expression Levels of the Genes cyclin-A2 and glucocorticoid receptor Are Associated with High-Quality Embryos in Gilthead Sea Bream (Sparus aurata L.)
by Anastasia N. Georgiou, Ioanna Georga, Andriana Stamopoulou, Kostas Tzokas, George Koumoundouros and Constantin N. Flytzanis
Aquac. J. 2022, 2(2), 51-58; https://doi.org/10.3390/aquacj2020005 - 28 Apr 2022
Cited by 1 | Viewed by 1872
Abstract
Identifying early egg-quality predictors is a major challenge in finfish hatcheries, and relevant research is now focused on the development of molecular markers. In our study, we examined whether fertilization rates and early morphological abnormalities in sea bream egg batches of high (HQ) [...] Read more.
Identifying early egg-quality predictors is a major challenge in finfish hatcheries, and relevant research is now focused on the development of molecular markers. In our study, we examined whether fertilization rates and early morphological abnormalities in sea bream egg batches of high (HQ) and low quality (LQ) are associated with mRNA levels of cathepsin D, cathepsin Z, cyclin-A2, and glucocorticoid receptor. Additionally, we examined whether these early quality descriptors were associated with the development of skeletal abnormalities during the larval period. HQ egg batches were characterized by significantly higher rates of normal embryos (95.8 ± 2.3%) and lower rates of unfertilized (2.8 ± 1.0%) and abnormal eggs (1.3 ± 1.4%), compared to LQ (84.2 ± 0.8% normal embryos, 12.3 ± 12.3 unfertilized eggs, and 3.5 ± 1.4% abnormal eggs) (p < 0.05, Mann–Whitney U test). Relative expression of cyclin-A2 and glucocorticoid receptor was found to be significantly higher in HQ embryos compared to those of LQ (respectively, p < 0.01 and p < 0.05, Mann–Whitney U test). No statistically significant differences were observed in the mRNA transcripts of cathepsin D and cathepsin Z (p > 0.05, Mann–Whitney U test). Differences in the rate of skeletal abnormalities between the two quality groups of larvae were not significant (p > 0.05, G-test), indicating that cyclin-A2 and glucocorticoid receptor may serve as reliable molecular markers for early prediction of fish egg quality but not for later larval stages. Full article
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14 pages, 1245 KiB  
Article
Effects of Alternative and Sustainable Ingredients on Rainbow Trout (Oncorhynchus mykiss) Growth, Muscle Composition and Health
by Alicia Estévez, Paula Frade, Martiña Ferreira, Leticia Regueiro, Mayte Alvarez, Belen Blanco, Laura Fernández and Mohamed Soula
Aquac. J. 2022, 2(2), 37-50; https://doi.org/10.3390/aquacj2020004 - 20 Apr 2022
Cited by 2 | Viewed by 3567
Abstract
Aquaculture supplies more than 50% of the total fish consumed by the world population. It is considered by FAO authorities that it will be the main source of fishery products by 2030. These positive data are contradicted by the fact that aquaculture relies [...] Read more.
Aquaculture supplies more than 50% of the total fish consumed by the world population. It is considered by FAO authorities that it will be the main source of fishery products by 2030. These positive data are contradicted by the fact that aquaculture relies too much on fish oil and fish meal as essential ingredients for food, which exerts significant pressure on marine ecosystems. The present study was planned to look for alternative ingredients in aquafeeds and three different ingredients were evaluated for the first time in juveniles of rainbow trout: (1) House cricket, Acheta domesticus, meal (DI) as a quality protein source; (2) a mixture of four marine microalgae species (DM), as an important source of protein and lipids; (3) protein and lipid fraction recovered from cooking water from canned tuna manufacturing processes (DP&L); and (4) a mix of the three ingredients (DMIX). All the feeds assayed were compared with a commercial feed (DC). Results showed that the formulated alternative feeds had different effects on the growth of the fish. DI and DP&L have a similar growth performance to the control, while the fish fed with DM and the DMix have a slightly lower growth (p < 0.05). No significant differences were observed in terms of FCR (Feed Conversion Ratio) and PER (Protein Efficiency Ratio) (p < 0.05). Fish muscle composition did not show any differences in moisture, protein, lipids and carbohydrates content. Only a significant difference was detected in ash and in saturated fatty acid (SFA) content (p < 0.05). The hepatosomatic index (HSI) was significantly reduced in DI compared to that observed for the DC (p < 0.05), whereas the viscerosomatic index (VSI) was significantly higher in DM. The nutritional value of the rainbow trout muscle at the end of the study shows that DM fed fish showed the highest PUFA/SFA ratio and the lowest atherogenic index (AI), whereas DMIX showed the lowest PUFA/SFA and the highest n-3/n-6 and AI. No differences were observed among diets in the thrombogenic index (TI) values. Any of these ingredients might be used as alternative sources of protein in feeds for fish aquaculture because no negative effects were detected on fish growth, muscle composition, fish health or final nutritional value, except in the case of microalgae, which needs more research to adjust its inclusion rate in the feed. Full article
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