Abstract
In this paper, we study the global well-posedness of a reaction–diffusion–advection system with time-dependent coefficients that models the interaction of ATM and ApoE proteins in cells under Alzheimer’s disease. We prove the existence and uniqueness of a non-negative global solution to this system considering in particular a non-autonomous advective term by demonstrating the existence of a local-in-time solution both with an autonomous and non-autonomous approach. The non-negativity of the solution is proven in the non-autonomous case and passed to the solution of the autonomous setting, and we compute energy estimates that show that this solution is in fact global.
Keywords:
reaction–diffusion–advection systems; non-autonomous; global well-posedness; Alzheimer’s disease modeling; protein interaction dynamics; semigroup and evolution systems; energy estimates MSC:
35K20; 35K40; 35K57; 35K58; 37N25; 92C50; 92D15
1. Motivation and State of the Art
The study of global well-posedness for reaction–diffusion systems has been deeply investigated in recent years for autonomous problems and even for non-autonomous problems, but advection has often been neglected. In the case of autonomous reaction–diffusion systems, the global existence of a unique solution up to dimension 2 under quadratic growth in the reaction and satisfying non-negativity and entropy dissipation was proved in [1,2]. In [3,4,5], the authors independently established between 2017 and 2019 that a global solution exists for higher dimensions under entropy dissipation and mass control for autonomous reaction–diffusion systems, and, moreover, in [6] it was demonstrated that the solution is uniformly bounded instead of polynomially.
In the case of non-autonomous reaction–diffusion systems, there is a gap of 21 years between [7], where it was proven that a global classical solution for a non-autonomous system exists under strong constraints for the reaction, and 2021, where in [8], the authors showed that a unique global weak solution for the reaction–diffusion system exists for just measurable diffusion coefficients and a quadratic reaction, under mass control and intermediate sum conditions.
Later, the main result of [5] was extended in [9] into a particular non-autonomous system; in [10] it was shown that there exists a unique global classical solution in dimension 1 for a system with mass dissipation; and ref. [11] verifies the existence of a global weak solution for a non-autonomous reaction–diffusion system with fractional diffusion and mass control.
For systems including advection, ref. [8] shows that a unique global weak solution exists under quasi-positivity, mass control and an intermediate sum condition, meaning that the partial sum of the reactions in each equation is bounded by a polynomial of degree r, where , and n is the spatial dimension. This means that for , the quadratic terms need to “cancel out” and at least one of the equations need to be at most linear. Thus, for non-autonomous systems with advection, global well-posedness has so far been restricted to cases where a cancellation condition controls the quadratic terms or to one spatial dimension. In contrast, for the ATM–ApoE model we prove global existence and uniqueness up to dimension 4 without relying on any such cancellation. Figure 1 illustrates the developments in well-posedness results for reaction-diffusion systems.
Figure 1.
State of the art on well-posedness of reaction–diffusion systems, building upon the foundational local/global classical solution results of Pazy [12]. For autonomous (blue) problems, the existence and uniqueness of a global solution have been proven in any dimension. For non-autonomous (orange) systems, the results have been proven for either specific problems, systems satisfying the intermediate sum condition, or problems without advection. The depicted works are, for autonomous problems: [1,2,3,4,5,6]; and for non-autonomous problems: [7,8,9,10,11].
In this work, we show a proof for global existence and uniqueness of a non-negative solution up to dimension 4 by a semigroup and evolution systems argument. This works for our particular system with the quadratic polynomial reaction satisfying quasi-positivity, with time-dependent coefficients and for time-dependent advection coefficients, which is relevant in the context of ATM-ApoE interaction (Figure 2) and potential treatments controlling stress and the advection coefficient. The quasi-positivity is a natural property of the system, since the variables of the model represent protein concentrations. Even though we do not treat the long-term behavior of the solution in this work, it is worth mentioning that our well-posedness result provides the foundation for subsequent stability analyses, such as those for time-periodic traveling fronts [13], and for studies of asymptotic symmetry of solutions [14].
Figure 2.
Diagram of spatial model interactions in a cell. Light blue shows the cytoplasm (), yellow shows the area around the nucleus where the ApoE proteins are located (), and pink shows the nucleus ().
We prove the well-posedness of a system that models the interaction between proteins in cells affected by Alzheimer’s disease (AD). The importance of this model is that AD is the leading cause of dementia worldwide and it affects over 55 million people, with projections estimating a tripling of cases by 2050 [15]. Characterized by progressive neurodegeneration, memory loss, and cognitive decline, AD remains incurable despite decades of research. Current therapies focus on symptom management, since the cause of AD is unknown. AD is traditionally attributed to the accumulation of amyloid- () plaques, tau protein neurofibrillary tangles, chronic neuroinflammation, and genetic factors such as the apolipoprotein E (ApoE) allele [16,17,18,19,20,21].
Recent radiobiological studies propose to focus on the Radiation-Induced ATM NucleoShuttling (RIANS) response [22]. This mechanism highlights the role of the Ataxia Telangiectasia Mutated (ATM) protein, a key mediator of DNA repair, and its interaction with ApoE (not necessarily allele). Under oxidative stress, ATM dimers dissociate into monomers that migrate to the nucleus to repair double-strand breaks (DSBs). However, in AD, overexpression of ApoE leads to the formation of ATM-ApoE complexes, which accumulate around the nucleus as a perinuclear crown (PC). This crown creates a barrier, impeding ATM’s nuclear entry and perpetuating unrepaired DNA damage, ultimately accelerating neuronal death [18].
2. Description of the Spatial Model
We study the well-posedness of a system that models the ATM-ApoE interaction. We propose a semilinear partial differential system of reaction–diffusion–advection equations that has four variables: M represents the concentration of ATM monomers while D denotes the concentration of ATM dimers, the variable A represents ApoE protein, and C the concentration of ATM-ApoE complexes. In this model, ATM monomers advect towards the nucleus of the cell to detect double-strand breaks (DSBs) in the DNA and repair them, due to an electrical signal sent by the nucleus. As mentioned before, DSBs may cause mutations or even cell death, so ATM is responsible for the repair of this DNA break. Oxidative stress monomerizes ATM dimers and ATM-ApoE complexes, allowing ATM to cross the nucleus membrane. ATM and ApoE tend to form dimers and complexes depending on different rates induced by oxidative stress, irradiation, and the intake of drugs. The complete interaction can be seen in Figure 2.
Consider and an interval . Fix .
Here, the coefficients and parameters are:
- : diffusion coefficients.
- , zero at the boundary and divergence-free: transport of monomers towards the nucleus.
- : rate of ATM dimer formation.
- : rate of ATM monomer degradation.
- : rate of ATM-ApoE complex formation.
- strictly positive and bounded: rate of monomerization of ATM due to oxidative stress.
- strictly positive and bounded: rate of monomerization of ATM-ApoE complex due to oxidative stress.
- : rate of production of ATM monomers in the cell.
In order to simplify notation we write . We consider the following non-autonomous system of reaction–diffusion–advection equations for :
with boundary and initial conditions
The choice of boundary conditions are due to the fact that none of these proteins exit the cell’s membrane; therefore, we consider homogeneous Neumann boundary conditions. When convenient, we write the system in the general form:
with boundary and initial conditions
where D is a diagonal matrix, is the advection coefficient and is the reaction term.
3. Main Result
First, let us define what a solution is; we provide a definition of a global classical solution for system (2, 3):
Definition 1 (Solution).
Let be a Banach space and let be the realization of in with homogeneous Neumann boundary conditions. Let Banach with the graph norm , where with b chosen such that Re (the choice of b produces equivalent norms). We say that a continuous function is a solution of system (3) in if for , , u satisfies the equation pointwise in , u is continuously differentiable on , and for every with as .
Remark 1.
We say that the solution is global if there is a solution in , where is maximal and .
The goal of this work is to prove the following well-posedness theorem:
Theorem 1.
If is non-negative, then there exists a unique global classical non-negative solution of system (2).
In the following sections we prove the non-negativity and the existence of a unique global classical solution to problems (2, 3). The proof for existence/uniqueness of a local-in-time solution is addressed in Section 4, the proof of non-negativity in Section 5 follows from [23] for a non-autonomous system and then passed to the solution of the autonomous problem, and in Section 6 we give a bound for the solution which gains regularity by a bootstrap argument, ensuring the solution is in fact global in time. The scheme of the proof is represented in Figure 3.
Figure 3.
Scheme of the proof numbered by section. We prove the existence of the local solution in both settings (Section 4) and prove the positivity in the non-autonomous case by the argument in [23] (Section 5). We pass this property to the solution of the autonomous setting and prove estimates (Section 6) that show that the solution is global.
4. Local in Time Solution
We consider the general form of the system, i.e.,
with boundary and initial conditions
Since the advection coefficient depends on time, we consider it as part of the reaction term to apply the semigroup theory for autonomous problems. The domain of the operator needs to take into account that must be well defined, so we define the problem over . To apply the existence result from [24] (p. 54, Theorem 3.3.3), we need the reaction to be locally Lipschitz on u. We check that
defined from is locally Lipschitz in u, where and . Since F is quadratic in u, let us consider only the term ,
since is embedded in for dimension [Gagliardo–Nirenberg], then
For the advection term, since we assume ,
So is locally Lipschitz from to . Since all the coefficients are locally Hölder continuous in t, existence and uniqueness follow from [24] (p. 54, Theorem 3.3.3).
Local Solution in Non-Autonomous Setting
It is useful in the next section to consider the local solution in the context of a non-autonomous problem defined in Hölder spaces, i.e., the time-dependent advection coefficient is considered as part of the operator instead of as part of the reaction term, so in this section we consider . We provide the necessary conditions to have such a solution.
Proposition 1.
Consider the system:
Let be Hölder continuous in t on and uniformly Lipschitz continuous (with constant L) on X. Let satisfy the following assumptions:
- (P1)
- The domain of , is dense in X and independent of t;
- (P2)
- For , the resolvent of exists for all λ with Re and there is a constant M such that
- (P3)
- There exist constants L and such that
And let be the associated evolution system [12] (p. 168, Theorem 7.1, Chapter 5). Then, the initial value problem has a unique mild solution . Moreover, the mapping is Lipschitz continuous from X into .
Remark 2.
These are two classical results from [12] presented as one for simplicity.
Proof.
For a given we define a mapping
by
Denoting by the norm of u as an element of , it follows readily from the definition of F that
where C is a bound of on by [12] (Chapter 5). By induction on k it follows that
and so
For k large enough , F has a unique fixed point u in . This fixed point is the desired solution of the system. The uniqueness of u and the Lipschitz continuity of the map are consequences of the following argument. Let v be a mild solution on with the initial value . Then,
which implies by Gronwall’s inequality that
and therefore
which yields both the uniqueness of u and the Lipschitz continuity of the map . □
In the previous proposition, the uniform Lipschitz condition on f assures the existence of a global mild solution. If f is assumed to be locally Lipschitz continuous in its second variable, then we have existence of a local mild solution. This proof is a classical result from [12], where we have made explicit, for the convenience of the reader, the changes made for evolution systems.
Corollary 1.
Let be continuous in t for and locally Lipschitz continuous in u, uniformly in t on bounded intervals. Consider the system and assumptions in Proposition 1. Then, for every there is a such that the initial value problem has a unique mild solution u on . Moreover, if , then
Proof.
Let be the Lipschitz constant of f in the ball of radius c with , i.e.,
for all such that . For every , , the initial value problem has a unique mild solution u on an interval , whose length is bounded below by
where , and . Indeed, let . The mapping F defined in Proposition 1 maps the ball of radius centered at 0 of into itself. This follows from the estimate
where the last inequality follows from the definition of . In this ball, F satisfies a uniform Lipschitz condition with constant and thus it possesses a unique fixed point u in the ball. This fixed point is the mild solution of the initial value problem in the interval . If u is a mild solution on the interval , it can be extended to the interval with by defining on , , where is the solution of the integral equation
Moreover, depends only on and .
Let be the maximal interval of existence of the mild solution u. If then since otherwise there is a sequence such that for all n. This would imply by what we have just proved that for each , near enough to , u defined on can be extended to , where is independent of and hence u can be extended beyond , contradicting the definition of . To prove the uniqueness of the local mild solution u of the initial value problem, we note that if v is another mild solution, then on every closed interval on which both u and v exist, they coincide by the uniqueness argument given at the end of Proposition 1. Therefore, both u and v have the same and on , . □
In [12] (p. 227, Lemma 6.1, Chapter 7) and [12] (p. 228, Theorem 6.2, Chapter 7), the author proves the existence of a solution in for a family of operators satisfying two conditions that are easier to verify than (P1), (P2), and (P3). The following proposition gathers both results adapted to . For completeness, we prove it in the case of following exactly the steps in [12] with the exception of one inequality which is proved in Lemma 1.
Proposition 2 (Alternative conditions).
For , let the family of operators in be defined as the realization of
in , i.e.,
with boundary differential operators derived from and
If this family satisfies the following conditions:
- (H1)
- The operators are uniformly elliptic in Ω, i.e., there is a constant such thatfor every and ,
- (H2)
- The coefficients are smooth functions of the variables x in for every and satisfy, for some constants and ,for and ,
then the family satisfies (P1)–(P3). And if satisfies (H1), (H2) and satisfies
for some constants and , then for every the linear problem
has a unique solution. Moreover, if is Hölder continuous in t on and locally Lipschitz continuous on , uniformly in t on bounded intervals, then for every the nonlinear problem
has a unique solution.
Proof.
From the definition of the operators , and since we assume for , the boundary operators are independent of t. It follows that for every real k, the domain of independent of t and therefore, for any choice of , the family satisfies the condition (P1). By Lemma 1 proven below, we have
for and satisfying Re and for some constant . Choosing , (4) implies that
holds for and satisfying Re . Using [25] (Theorem 3.1.32), is sectorial and therefore
for . Therefore, fixing implies that the family satisfies (P2). For and we have and
Then, from estimates (4) and (6),
Combining these inequalities yields
for every , so the family also satisfies the condition (P3). Finally, if satisfies
for some constants and , then there exists such that
for any real k. That being said, since we chose , we take advantage of this to simplify the computations. Indeed,
so
The first term is bounded by
The second term is bounded by
The norm can be bounded independently of s. Indeed,
Thus, for every ,
Since is Lipschitz continuous with constant , then
where the last inequality comes from the fact that
Taking yields inequality (5). Given , the initial value problem
has a unique classical solution v by Proposition 1. Then, is the unique solution of the initial value problem
The same argument is used for the nonlinear initial value problem. □
Lemma 1.
Let be the realization of in with Neumann boundary conditions, i.e.,
with boundary differential operators derived from . For λ sufficiently large in the ray arg and ,
Proof.
By [26] (Theorem 5), we have the estimate
Let , and be the restriction of to . By changing the norm of the estimate, we do not change the notion of ellipticity given in [27], and since the operator L is the same as in [12] (Chapter 7.3), it is elliptic and satisfies, like , the same estimate (6). Let , where is a cutoff function such that for and for , and is to be chosen later. Then, by applying L we obtain
By definition of and by using estimate (6) on L,
where . Now, we check that ,
Then, by combining the two inequalities,
and by reordering the terms,
We can choose sufficiently large such that , then
and therefore
□
Since system (2) satisfies conditions (H1) and (H2), and we showed that these conditions imply (P1), (P2), and (P3) in , then there exists a local-in-time solution in . This solution in fact is also a solution in , since the system is the same. Therefore, by the uniqueness of the solution in they are the same. These two ways of representing the solution will help us in the next section to prove the non-negativity of the solution.
5. Non-Negativity of the System and Boundedness
In this section, we establish that for non-negative initial conditions, the system remains non-negative. To do this, we recall from [23] that for non-autonomous ODE systems, positive initial conditions give a positive solution. Then, we show that for a non-autonomous semilinear system like (4), the positivity is also preserved. Finally, we prove that non-negative initial conditions give a non-negative solution. We start by showing that system (4) satisfies a quasi-positivity condition.
Lemma 2.
System (3) satisfies the following quasi-positivity condition
Proof.
Let us consider the reaction term
We check for each equation,
□
We give the statement and proof that for ODE non-autonomous systems, a positive initial condition gives a positive solution,
Proposition 3.
Let be a continuous vector field on , locally Lipschitz in the second variable. Assume that for all and for all , . Let be any maximal positive trajectory of the system . Then, if the initial vector has all its components positive, the same property is true for the vector for all .
Proof.
Assuming the contrary, let i be one of the indices (there may be several) for which vanishes for the first time at while the other components have remained greater or equal than zero until time T. For all ,
since is locally Lipschitz in the second variable with Lipschitz constant M and by applying the assumption on F. Then, by continuity at T we obtain
which is a contradiction. □
We consider now the case of abstract semilinear systems. Let be a bounded domain of . Consider a diagonal operator associated with an n-vector of (possibly unbounded) linear operators on X, which is a closed subspace of . We assume that the family of operators satisfy conditions (H1) and (H2), and consider a continuous vector field, locally Lipschitz in the second variable. Since the family satisfies (H1) and (H2), it produces an evolution system , and we assume that it satisfies that, for all such that and ,
We now state the positivity-preserving result for non-autonomous abstract semilinear systems:
Theorem 2.
Assuming the quasi-positivity condition that for all and for all , , let be any (maximal) positive trajectory of the system
Then, if the initial vector is such that for each , we have and , then all components of the solution vector are positive everywhere in Ω for all .
Proof.
Assuming the contrary, let i be one of the indices for which vanishes for the first time at and some point while the other components have remained positive (at least non-negative) until time T. For the i-th equation we have
i.e.,
Consider such that
then by the variation of constants formula,
Since , then by the weak maximum principle for parabolic problems, and since , then . Since and is not identically zero, then by the strong positivity hypothesis of evolution systems,
Therefore, for any . By continuity at T we conclude that , which is a contradiction. □
For the particular case of system (4), we consider the general form
where D is a diagonal matrix of positive entries and is the advection coefficient. One can easily check that the reaction term F is locally Lipschitz from to . The family of operators satisfies conditions (H1) and (H2) for all i, since is smooth in x and Hölder continuous in t, and so for each i there is an evolution system over the Banach space ; these evolution systems satisfy (thanks to parabolic weak, strong maximum principles and Harnack inequality), for all such that and ,
To check that each evolution system satisfies the strong positivity hypothesis we notice that for i, is a solution of the parabolic equation . By the maximum principle for parabolic equations [28], and not identically zero implies that
The next result proves by using Theorem 2 that non-negative initial conditions give a non-negative solution.
Proposition 4.
Assuming the quasi-positivity condition stated in Lemma 2, let be any maximal positive trajectory of system (8) with homogeneous Neumann boundary conditions. Then, if the initial vector is such that for each , we have , then all components of the solution vector are non-negative everywhere in Ω for all . Finally, whenever is such that , we have
Proof.
We start by replacing by and consider the corresponding maximal solution,
of system (8) with homogeneous Neumann boundary conditions. It is classical [29] that the life time of overpasses any number for small enough and the sequence of vector functions converges uniformly to in as tends to zero. Now, for any , the solution has, by continuity, all its components positive in for small t. Theorem 2 applied to now shows that the solution has all its components positive in for all . We conclude by letting tend to zero. The last statement follows from the inequality
which implies where . □
We conclude that for system (4) the solution is non-negative given that the initial condition is non-negative. For the variables A and C, we have even more, and we bound them in , as seen in the following result:
Theorem 3.
are bounded in , and .
Proof.
Consider , then S satisfies the heat equation and therefore, by the maximum principle, is bounded in by S in the parabolic boundary . Since the boundary condition is Neumann homogeneous, by the strong maximum principle it cannot achieve its maximum in [28]. Therefore, its maximum is reached in , i.e., ; since A and C are non-negative, we have . □
These results are true for the unique solution in . Now, we notice that since this solution also lies in , then it must be equal to the unique solution given by the autonomous problem in the domain defined by the fractional power of the laplacian. Therefore, we have a unique solution in defined over the domain , and it is non-negative provided that the initial condition is non-negative.
6. A Priori Estimates
To be able to bound the energy of the system, we consider estimates in and for M and D respectively, and estimates (in fact estimates in ) for A and C. The result is stated in the following lemma:
Lemma 3.
Letting be real numbers such that , then M is bounded uniformly in , D is uniformly bounded in , and are uniformly bounded in . Moreover, and
Proof.
Let us multiply the first equation by and the second equation by , with real numbers to be determined, and the third and fourth equation by A and C respectively. Then, notice that
so using integration by parts and the Hölder inequality, we get
by Young’s inequality, the bound continues as follows:
with sufficiently small to absorb the last term by the diffusion,
Also,
We define the energy
Adding the four equations and bounding the non-negative terms on the left hand side by zero, and by using Cauchy–Schwarz and Young inequalities when convenient, we get
The last terms to bound are and . To that purpose, we apply the Hölder inequality. For the second one with , and taking ,
Doing the same with the term , we bound it by
Then, by choosing sufficiently small such that they are absorbed by , we get
We get an inequality of the form
Then, we use Gronwall’s lemma to bound the solution by a constant dependent on T. In the following we consider , then we have
We have in fact
but for M and D, they do not belong to , only , and
Finally, we can take large enough such that . Then, we classically obtain a supplementary regularity for the solution u, which is
assuming the initial datum is in ; this is a bootstrap argument, thus showing that the solution is bounded and therefore global. □
7. Conclusions
In this work, we proved the well-posedness of a non-autonomous system of reaction–diffusion–advection with a time-dependent advection coefficient, relevant to modeling protein interaction in Alzheimer’s disease. The main contributions are the proof of positivity via considering the local solution both in an autonomous and non-autonomous setting to pass the positivity property from one solution to the other, and second, exploiting the structure of the nonlinearity to achieve estimates that show that the solution is global. The time dependence of the coefficients, in particular the advection coefficient, serves as a base to work on treatment strategies that control the pull of ATM monomers towards the nucleus, ensuring that the solution remains well-posed.
8. Perspectives
We have established the global well-posedness of the system under homogeneous Neumann boundary conditions. A natural and biologically relevant extension is to consider more general boundary conditions, such as Robin or non-homogeneous Neumann conditions. These could model protein exchange with the nucleus and give a more accurate representation of the interaction.
From a mathematical viewpoint, extending the analysis requires revisiting the functional setting, as the domain of the Laplace operator must be adapted. The positivity preservation, which relies on maximum principles, must also be verified under the new boundary conditions. Furthermore, the energy estimates need to be rederived to control any additional boundary terms.
Author Contributions
Conceptualization, F.O.F. and L.P.-M.; methodology, I.S.C., F.O.F. and L.P.-M.; software, F.O.F.; validation, I.S.C., F.O.F. and L.P.-M.; formal analysis, F.O.F.; investigation, I.S.C., F.O.F. and L.P.-M.; writing—original draft preparation, F.O.F.; writing—review and editing, I.S.C., F.O.F. and L.P.-M.; supervision, L.P.-M.; funding acquisition, L.P.-M. All authors have read and agreed to the published version of the manuscript.
Funding
This research was funded by Agence Nationale de la Recherche (ANR-22-EXES-0012).
Institutional Review Board Statement
Not applicable.
Informed Consent Statement
Not applicable.
Data Availability Statement
No new data were created or analyzed in this study. Data sharing is not applicable to this article.
Acknowledgments
This work was supported by a grant from the French National Research Agency as part of the “Investissements d’Avenir ExcellencES” program from France 2030 (SHAPE-Med@Lyon; ANR-22-EXES-0012).
Conflicts of Interest
The authors declare no conflicts of interest.
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