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Microorganisms, Volume 10, Issue 6

2022 June - 181 articles

Cover Story: Tick cell lines are important tools for research on ticks and the pathogens they transmit, facilitating laboratory-based isolation, propagation, and study of disease-causing agents, as well as aspects of tick biology. This study reports ten new cell lines derived from embryos of five genera of European ticks. Each cell line was generated from a primary culture comprising a wide variety of cell phenotypes, of which only some started to grow continuously. Molecular analysis confirmed the species origin of each cell line and revealed genetic differences between cell lines derived from ticks collected in the same or nearby geographic locations. Collectively, these new cell lines will support research into a wide range of viral, bacterial, and protozoal tick-borne diseases prevalent in Europe. View this paper
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Articles (181)

  • Article
  • Open Access
43 Citations
13,909 Views
25 Pages

Effects of Inulin-Based Prebiotics Alone or in Combination with Probiotics on Human Gut Microbiota and Markers of Immune System: A Randomized, Double-Blind, Placebo-Controlled Study in Healthy Subjects

  • Alessandra De Giani,
  • Anna Sandionigi,
  • Jessica Zampolli,
  • Angela Michelotti and ,
  • Francesco Tursi,
  • Massimo Labra and
  • Patrizia Di Gennaro
  • + 2 authors+ 0 author

The gut microbiota is implicated in diverse interactions affecting human health. The present study reports a randomized, double-blind, placebo-controlled clinical study conducted by administering a new synbiotic formulation composed of two Lactobacil...

(This article belongs to the Special Issue Beneficial Microbes and Gastrointestinal Microbiota)
  • Article
  • Open Access
3 Citations
3,752 Views
16 Pages

For five decades it has been known that the pentamer of B subunits (choleragenoid) of the cholera toxin (CT) of Vibrio cholerae binds with high preference to the ganglioside GM1 (II3Neu5Ac-Gg4Cer). However, the exact structures of CT-binding GM1 lipo...

(This article belongs to the Section Molecular Microbiology and Immunology)
  • Communication
  • Open Access
23 Citations
8,823 Views
9 Pages

Comparison of DNA Extraction and Amplification Techniques for Use with Engorged Hard-Bodied Ticks

  • Gretchen C. Reifenberger,
  • Bryce A. Thomas and
  • DeLacy V. L. Rhodes

Tick-borne infections are a serious threat to humans, livestock, and companion animals in many parts of the world, often leading to high morbidity and mortality rates, along with decreased production values and/or costly treatments. The prevalence of...

(This article belongs to the Special Issue Research on Ticks and Tick-Borne Pathogens)
  • Article
  • Open Access
15 Citations
4,897 Views
18 Pages

Enhancing Red Yeast Biomass Yield and Lipid Biosynthesis by Using Waste Nitrogen Source by Glucose Fed-Batch at Low Temperature

  • Iwona Gientka,
  • Magdalena Wirkowska-Wojdyła,
  • Ewa Ostrowska-Ligęza,
  • Monika Janowicz and ,
  • Lidia Reczek,
  • Alicja Synowiec and
  • Stanisław Błażejak
  • + 2 authors+ 0 author

This work reports the effect of simple feeding strategies and temperature to obtain high-cell-density cultures of Rhodotorula glutinis var. rubescens LOCKR13 maximizing the de novo lipid productivity using deproteinated potato wastewater (DPW) as a b...

(This article belongs to the Special Issue Advances in Microbial Biosynthesis)
  • Article
  • Open Access
10 Citations
3,515 Views
15 Pages

How microbial communities respond to extreme conditions in the stratosphere remains unclear. To test this effect, cyanobacterial crusts collected from Tengger Desert were mounted to high balloons and briefly exposed (140 min) to high UV irradiation a...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
9 Citations
4,536 Views
10 Pages

Mating Interactions between Schistosoma bovis and S. mansoni and Compatibility of Their F1 Progeny with Biomphalaria glabrata and Bulinus truncatus

  • Amos Mathias Onyekwere,
  • Alejandra De Elias-Escribano,
  • Julien Kincaid-Smith,
  • Sarah Dametto and ,
  • Jean-François Allienne,
  • Anne Rognon,
  • Maria Dolores Bargues and
  • Jérôme Boissier
  • + 3 authors+ 0 author

Contrary to the majority of other Trematoda, Schistosoma species are gonochoric. Consequently, in endemic areas where several schistosome species overlap and can co-infect the same definitive host, there may be frequent opportunities for interspecifi...

(This article belongs to the Section Parasitology)
  • Article
  • Open Access
3 Citations
3,092 Views
11 Pages

mRNA BNT162b Vaccine Elicited Higher Antibody and CD4+ T-Cell Responses than Patients with Mild COVID-19

  • Federica Zavaglio,
  • Irene Cassaniti,
  • Josè Camilla Sammartino,
  • Stelvio Tonello and ,
  • Pier Paolo Sainaghi,
  • Viola Novelli,
  • Federica Meloni,
  • Daniele Lilleri and
  • Fausto Baldanti
  • + 4 authors+ 0 author

We compared the development and persistence of antibody and T-cell responses elicited by the mRNA BNT162b2 vaccine or SARS-CoV-2 infection. We analysed 37 post-COVID-19 patients (15 with pneumonia and 22 with mild symptoms) and 20 vaccinated subjects...

(This article belongs to the Section Virology)
  • Article
  • Open Access
12 Citations
4,958 Views
21 Pages

Characterization of Microbial Diversity in Decayed Wood from a Spanish Forest: An Environmental Source of Industrially Relevant Microorganisms

  • Óscar Velasco-Rodríguez,
  • Mariana Fil,
  • Tonje M. B. Heggeset,
  • Kristin F. Degnes and ,
  • David Becerro-Recio,
  • Katarina Kolsaková,
  • Tone Haugen,
  • Malene Jønsson,
  • Macarena Toral-Martínez and
  • Carlos Barreiro
  • + 9 authors+ 4 authors

Rotting wood is inhabited by a large diversity of bacteria, fungi, and insects with complex environmental relationships. The aim of this work was to study the composition of the microbiota (bacteria and fungi) in decaying wood from a northwest Spanis...

(This article belongs to the Special Issue Secondary Metabolism of Microorganisms)
  • Article
  • Open Access
2 Citations
3,180 Views
12 Pages

Endosymbiosis between heterotrophic host and microalga often breaks down because of environmental conditions, such as temperature change and exposure to toxic substances. By the time of the apparent breakdown of endosymbiosis, it is often too late fo...

(This article belongs to the Special Issue Paramecium as Modern Model System)
  • Review
  • Open Access
51 Citations
6,304 Views
30 Pages

Bacteria use a cell-cell communication process called quorum sensing (QS) to orchestrate collective behaviors. QS relies on the group-wide detection of extracellular signal molecules called autoinducers (AI). Quorum sensing is required for virulence...

  • Review
  • Open Access
74 Citations
18,842 Views
16 Pages

Current Progress and Future Perspectives on the Use of Bacillus clausii

  • Emilia Ghelardi,
  • Ana Teresa Abreu y Abreu,
  • Christian Boggio Marzet,
  • Guillermo Álvarez Calatayud and ,
  • Marcos Perez and
  • Ana Paula Moschione Castro
  • + 1 author+ 0 author

Bacillus clausii is a probiotic that benefits human health. Its key characteristics include the ability to form spores; the resulting tolerance to heat, acid, and salt ensures safe passage through the human gastrointestinal tract with no loss of...

(This article belongs to the Section Gut Microbiota)
  • Article
  • Open Access
11 Citations
3,341 Views
8 Pages

Genomic Characterization of Escherichia coli O8 Strains Producing Shiga Toxin 2l Subtype

  • Xi Yang,
  • Qian Liu,
  • Hui Sun,
  • Yanwen Xiong and ,
  • Andreas Matussek and
  • Xiangning Bai
  • + 1 author+ 0 author

Shiga toxin-producing Escherichia coli (STEC) can cause diseases ranging from mild diarrhea to fatal extra-intestinal hemolytic uremic syndrome (HUS). Shiga toxin (Stx) is the key virulence factor in STEC, two Stx types (Stx1 and Stx2) and several su...

(This article belongs to the Special Issue Foodborne Pathogens: Detection Methods, Food Safety, and Public Health)
  • Article
  • Open Access
4 Citations
3,142 Views
15 Pages

Effect of Caging on Cryptosporidium parvum Proliferation in Mice

  • Hannah N. Creasey,
  • Wen Zhang and
  • Giovanni Widmer

Cryptosporidiosis is an enteric infection caused by several protozoan species in the genus Cryptosporidium (phylum Apicomplexa). Immunosuppressed mice are commonly used to model this infection. Surprisingly, for a pathogen like Cryptosporidium parvum...

(This article belongs to the Section Parasitology)
  • Article
  • Open Access
8 Citations
4,117 Views
14 Pages

Distribution and Transfer of Plasmid Replicon Families among Multidrug-Resistant Enterococcus faecalis and Enterococcus faecium from Poultry

  • Sohyun Cho,
  • Elizabeth A. McMillan,
  • John B. Barrett,
  • Lari M. Hiott and ,
  • Tiffanie A. Woodley,
  • Sandra L. House,
  • Jonathan G. Frye and
  • Charlene R. Jackson
  • + 3 authors+ 0 author

The presence and transfer of plasmids from commensal bacteria to more pathogenic bacteria may contribute to the dissemination of antimicrobial resistance. However, the prevalence of plasmids from commensal bacteria, such as the enterococci, in food a...

(This article belongs to the Special Issue Antimicrobial Resistance and Genetic Elements in Bacteria)
  • Article
  • Open Access
8 Citations
3,562 Views
16 Pages

Leishmania infantum Infection of Primary Human Myeloid Cells

  • Morgane Picard,
  • Calaiselvy Soundaramourty,
  • Ricardo Silvestre,
  • Jérôme Estaquier and
  • Sónia André

Circulating phagocytic cells often serve as cellular targets for a large number of pathogens such as Leishmania parasites. Studying primary human cells in an infectious context requires lengthy procedures for cell isolation that may affect the analys...

(This article belongs to the Special Issue Advances in Leishmania Research: From Basic Parasite Biology to Disease Control)
  • Article
  • Open Access
73 Citations
4,335 Views
10 Pages

Plant growth-promoting rhizobacteria are known to enhance the growth and antioxidant activity of several plants. However, the effects of such rhizobacteria on Geum aleppicum, a plant with pharmacological potential in Korea are unknown. In this study,...

(This article belongs to the Special Issue Plant-Bacteria Interactions)
  • Article
  • Open Access
11 Citations
5,349 Views
15 Pages

Establishment of a Cre-loxP System Based on a Leaky LAC4 Promoter and an Unstable panARS Element in Kluyveromyces marxianus

  • Haiyan Ren,
  • Anqi Yin,
  • Pingping Wu,
  • Huanyu Zhou and ,
  • Jungang Zhou,
  • Yao Yu and
  • Hong Lu
  • + 2 authors+ 0 author

The Cre-loxP system produces structural variations, such as deletion, duplication, inversion and translocation, at specific loci and induces chromosomal rearrangements in the genome. To achieve chromosomal rearrangements in Kluyveromyces marxianus, t...

(This article belongs to the Special Issue Biotechnological Applications of Yeasts)
  • Review
  • Open Access
  • Best Paper Award
212 Citations
23,264 Views
116 Pages

Chronic and recurrent bacterial infections are frequently associated with the formation of biofilms on biotic or abiotic materials that are composed of mono- or multi-species cultures of bacteria/fungi embedded in an extracellular matrix produced by...

(This article belongs to the Section Biofilm)
  • Article
  • Open Access
4 Citations
5,062 Views
8 Pages

The diagnosis of intestinal parasitic infections still widely relies on microscopic examination of stools and requires reliable reagents and staff expertise. The ParaFlo® assays (Eurobio Ingen) are ready-to-use concentration methods for parasite...

(This article belongs to the Section Parasitology)
  • Article
  • Open Access
32 Citations
6,907 Views
40 Pages

Tick-borne pathogens (TBPs) include a wide range of bacteria, parasites and viruses that cause a large spectrum of animal, human and zoonotic tick-borne diseases (TBDs). The object of this review was to establish an inventory and an analysis of TBPs...

(This article belongs to the Special Issue Research on Ticks and Tick-Borne Pathogens)
  • Article
  • Open Access
5 Citations
4,016 Views
13 Pages

A Calculator for COVID-19 Severity Prediction Based on Patient Risk Factors and Number of Vaccines Received

  • Ariel Israel,
  • Alejandro A. Schäffer,
  • Eugene Merzon,
  • Ilan Green and ,
  • Eli Magen,
  • Avivit Golan-Cohen,
  • Shlomo Vinker and
  • Eytan Ruppin
  • + 3 authors+ 0 author

Vaccines have allowed for a significant decrease in COVID-19 risk, and new antiviral medications can prevent disease progression if given early in the course of the disease. The rapid and accurate estimation of the risk of severe disease in new patie...

(This article belongs to the Special Issue SARS-CoV-2/COVID-19: Infection Models, Therapeutics and Vaccines)
  • Article
  • Open Access
2 Citations
4,067 Views
17 Pages

Rhodovulum spp. are anoxygenic phototrophic purple bacteria with versatile metabolisms, including the ability to obtain electrons from minerals in their environment to drive photosynthesis, a relatively novel process called phototrophic extracellular...

(This article belongs to the Special Issue Phototrophic Bacteria)
  • Communication
  • Open Access
11 Citations
2,986 Views
7 Pages

Distinguishing Kingella kingae from Pyogenic Acute Septic Arthritis in Young Portuguese Children

  • Catarina Gouveia,
  • Ana Subtil,
  • Susana Norte,
  • Joana Arcangelo and ,
  • Madalena Almeida Santos,
  • Rita Corte-Real,
  • Maria João Simões,
  • Helena Canhão and
  • Delfin Tavares
  • + 4 authors+ 0 author

(1) Background: We aim to identify clinical and laboratorial parameters to distinguish Kingella kingae from pyogenic septic arthritis (SA). (2) Methods: A longitudinal, observational, single-centre study of children < 5 years old with microbiologi...

(This article belongs to the Special Issue Kingella kingae: Virulence Factors, Clinical Disease, and Diagnostics)
  • Review
  • Open Access
112 Citations
10,858 Views
15 Pages

Lepidopteran insects are one of the most widespread and speciose lineages on Earth, with many common pests and beneficial insect species. The evolutionary success of their diversification depends on the essential functions of gut microorganisms. This...

(This article belongs to the Section Gut Microbiota)
  • Article
  • Open Access
17 Citations
4,252 Views
19 Pages

The Main Bacterial Communities Identified in the Sites Affected by Periimplantitis: A Systematic Review

  • Simina Angela Lăcrimioara Iușan,
  • Ondine Patricia Lucaciu,
  • Nausica Bianca Petrescu,
  • Ioana Codruța Mirică and ,
  • Dan-Alexandru Toc,
  • Silviu Albu and
  • Carmen Costache
  • + 2 authors+ 0 author

(1) Background: Periimplantitis is an infectious condition that affects the periimplant tissue and is of bacterial etiology. However, to date, the exact bacterial flora involved in its occurrence is not known. The aim of this literature review was to...

(This article belongs to the Section Medical Microbiology)
  • Article
  • Open Access
99 Citations
8,847 Views
16 Pages

Escherichia/Shigella, SCFAs, and Metabolic Pathways—The Triad That Orchestrates Intestinal Dysbiosis in Patients with Decompensated Alcoholic Cirrhosis from Western Mexico

  • Tonatiuh Abimael Baltazar-Díaz,
  • Luz Alicia González-Hernández,
  • Juan Manuel Aldana-Ledesma,
  • Marcela Peña-Rodríguez and ,
  • Alejandra Natali Vega-Magaña,
  • Adelaida Sara Minia Zepeda-Morales,
  • Rocío Ivette López-Roa,
  • Susana del Toro-Arreola,
  • Erika Martínez-López and
  • Miriam Ruth Bueno-Topete
  • + 6 authors+ 1 author

Gut microbiota undergoes profound alterations in alcohol cirrhosis. Microbiota-derived products, e.g., short chain fatty acids (SCFA), regulate the homeostasis of the gut-liver axis. The objective was to evaluate the composition and functions of the...

(This article belongs to the Special Issue Gut Microbioma Structure and Functions in Human Health and Disease 2.0)
  • Article
  • Open Access
1 Citations
3,707 Views
19 Pages

SARS-CoV-2: Two Years in the Pandemic: What Have We Observed from Genome Sequencing Results in Lithuania?

  • Lukas Zemaitis,
  • Gediminas Alzbutas,
  • Emilija Gecyte,
  • Dovydas Gecys and
  • Vaiva Lesauskaite

SARS-CoV-2 has spread vastly throughout the word. In this study, we focus on the patterns of spread in Lithuania. By analysing the genetically sequenced data of different lineages and their first appearances, we were able to compare the dynamics of s...

(This article belongs to the Section Virology)
  • Review
  • Open Access
14 Citations
5,724 Views
20 Pages

Viral Hyperparasitism in Bat Ectoparasites: Implications for Pathogen Maintenance and Transmission

  • Alexander Tendu,
  • Alice Catherine Hughes,
  • Nicolas Berthet and
  • Gary Wong

Humans continue to encroach on the habitats of wild animals, potentially bringing different species into contact that would not typically encounter each other under natural circumstances, and forcing them into stressful, suboptimal conditions. Stress...

(This article belongs to the Special Issue Discovery and Characterization of Novel/Emerging Viruses)
  • Article
  • Open Access
10 Citations
3,142 Views
13 Pages

Effects of Fermented Herbal Tea Residue on Serum Indices and Fecal Microorganisms of Chuanzhong Black Goats

  • Chongya Gao,
  • Longfei Wu,
  • Weiran Zhao,
  • Yiye Chen and ,
  • Ming Deng,
  • Guangbin Liu,
  • Yongqing Guo and
  • Baoli Sun
  • + 3 authors+ 0 author

Herbal tea residues (HTRs) are a by−product of herbal tea processing that contains many nutrients and active substances but are often discarded as waste. The main aim of the present study was to determine the food safety of HTRs and lay the fou...

(This article belongs to the Section Gut Microbiota)
  • Article
  • Open Access
7 Citations
5,683 Views
15 Pages

Alternate Special Stains for the Detection of Mycotic Organisms in Oral Cyto-Smears—A Histomorphometric Study

  • S. V. Sowmya,
  • Dominic Augustine,
  • Beena Hemanth,
  • Arcot Gopal Prathab and ,
  • Ahmed Alamoudi,
  • Hammam Ahmed Bahammam,
  • Sarah Ahmed Bahammam,
  • Maha A. Bahammam,
  • Vanishri C. Haragannavar and
  • Shankargouda Patil
  • + 6 authors+ 1 author

In the wake of the COVID-19 pandemic, fungal infections of the maxillofacial region have become prevalent, making their accurate diagnosis vital. Histopathological staining remains a simple, cost-effective technique for differentiation and diagnosis...

(This article belongs to the Special Issue Host–Microbe Interactions in Animal/Human Health and Disease 2021)
  • Article
  • Open Access
9 Citations
3,345 Views
13 Pages

Enhancing Biocide Efficacy: Targeting Extracellular DNA for Marine Biofilm Disruption

  • Benjamin Tuck,
  • Elizabeth Watkin,
  • Anthony Somers,
  • Maria Forsyth and
  • Laura L. Machuca

Biofilm formation is a global health, safety and economic concern. The extracellular composition of deleterious multispecies biofilms remains uncanvassed, leading to an absence of targeted biofilm mitigation strategies. Besides economic incentives, d...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
23 Citations
6,200 Views
14 Pages

High Throughput Screening of Antimicrobial Resistance Genes in Gram-Negative Seafood Bacteria

  • Sabine Delannoy,
  • Corine Hoffer,
  • Raphaëlle Youf,
  • Emilie Dauvergne and ,
  • Hattie E. Webb,
  • Thomas Brauge,
  • Mai-Lan Tran,
  • Graziella Midelet,
  • Sophie A. Granier and
  • Anne Brisabois
  • + 7 authors+ 2 authors

From a global view of antimicrobial resistance over different sectors, seafood and the marine environment are often considered as potential reservoirs of antimicrobial resistance genes (ARGs) and mobile genetic elements (MGEs); however, there are few...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Article
  • Open Access
15 Citations
4,070 Views
11 Pages

Human granulocytic anaplasmosis (HGA) and human monocytic ehrlichiosis (HME) are zoonotic tick-borne diseases transmitted via tick bites. To determine the state of human Anaplasma and Ehrlichia infections caused by tick bites in the Republic of Korea...

(This article belongs to the Section Parasitology)
  • Article
  • Open Access
15 Citations
4,308 Views
15 Pages

Development of Droplet Digital PCR Assay for Detection of Seed-Borne Burkholderia glumae and B. gladioli Causing Bacterial Panicle Blight Disease of Rice

  • Jiannan Zhang,
  • Jinyan Luo,
  • Lei Chen,
  • Temoor Ahmed and ,
  • Saqer S. Alotaibi,
  • Yanli Wang,
  • Guochang Sun,
  • Bin Li and
  • Qianli An
  • + 4 authors+ 0 author

Bacterial panicle blight of rice or bacterial grain rot of rice is a worldwide rice disease. Burkholderia glumae and B. gladioli are the causal agents. The early and accurate detection of seed-borne B. glumae and B. gladioli is critical for domestic...

(This article belongs to the Special Issue Plant Pathogenic Bacteria: Genetics, Genomics and Molecular Biology)
  • Article
  • Open Access
7 Citations
3,101 Views
11 Pages

PDIA, an Iminosugar Compound with a Wide Biofilm Inhibitory Spectrum Covering Both Gram-Positive and Gram-Negative Human Bacterial Pathogens

  • Łucja Kozień,
  • Estelle Gallienne,
  • Olivier Martin,
  • Sophie Front and ,
  • Magdalena Strus and
  • Piotr Heczko
  • + 1 author+ 0 author

Many difficult-to-treat human infections related to catheters and other indwelling devices are caused by bacteria residing in biofilms. One of the key properties of microorganisms residing in a biofilm is decreased susceptibility towards antimicrobia...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Editorial
  • Open Access
1,881 Views
3 Pages

Enteroviruses (Enterovirus genus, Picornaviridae family) are distributed worldwide and are among the most common causes of human disease globally [...]

(This article belongs to the Special Issue Epidemiology of Enterovirus Disease)
  • Review
  • Open Access
261 Citations
26,092 Views
16 Pages

Biofertilizer: The Future of Food Security and Food Safety

  • Augustine Innalegwu Daniel,
  • Adewale Oluwaseun Fadaka,
  • Arun Gokul,
  • Olalekan Olanrewaju Bakare and ,
  • Omolola Aina,
  • Stacey Fisher,
  • Adam Frank Burt,
  • Vuyo Mavumengwana,
  • Marshall Keyster and
  • Ashwil Klein
  • + 5 authors+ 0 author

There is a direct correlation between population growth and food demand. As the global population continues to rise, there is a need to scale up food production to meet the food demand of the population. In addition, the arable land over time has los...

(This article belongs to the Special Issue Biofertilizer Microorganism in Agriculture)
  • Article
  • Open Access
4 Citations
4,170 Views
16 Pages

Physiologic, Genomic, and Electrochemical Characterization of Two Heterotrophic Marine Sediment Microbes from the Idiomarina Genus

  • Jorge Vinales,
  • Joshua Sackett,
  • Leah Trutschel,
  • Waleed Amir and ,
  • Casey Norman,
  • Edmund Leach,
  • Elizabeth Wilbanks and
  • Annette Rowe
  • + 3 authors+ 0 author

Extracellular electron transfer (EET), the process that allows microbes to exchange electrons in a redox capacity with solid interfaces such as minerals or electrodes, has been predominantly described in microbes that use iron during respiration. In...

(This article belongs to the Special Issue New Electrogenic Microbes)
  • Article
  • Open Access
15 Citations
4,557 Views
12 Pages

The Effects of DNA Extraction Kits and Primers on Prokaryotic and Eukaryotic Microbial Community in Freshwater Sediments

  • Zihan Shi,
  • Qiaoyi Kong,
  • Xinghao Li,
  • Wenxin Xu and ,
  • Chengzhi Mao,
  • Yunfeng Wang,
  • Weibo Song and
  • Jie Huang
  • + 3 authors+ 0 author

DNA based sequencing technology has revolutionized the field of microbial ecology and environmental studies. However, biases can be introduced at all experimental steps and, thus, affect the interpretation of microbial community. So far, previous stu...

(This article belongs to the Section Environmental Microbiology)
  • Article
  • Open Access
11 Citations
4,314 Views
21 Pages

The Functional Biogeography of eDNA Metacommunities in the Post-Fire Landscape of the Angeles National Forest

  • Savanah Senn,
  • Sharmodeep Bhattacharyya,
  • Gerald Presley,
  • Anne E. Taylor and ,
  • Bruce Nash,
  • Ray A. Enke,
  • Karen B. Barnard-Kubow,
  • Jillian Ford,
  • Brandon Jasinski and
  • Yekaterina Badalova
  • + 5 authors+ 0 author

Wildfires have continued to increase in frequency and severity in Southern California due in part to climate change. To gain a further understanding of microbial soil communities’ response to fire and functions that may enhance post-wildfire re...

(This article belongs to the Special Issue Advances in Soil Microbiome)
  • Article
  • Open Access
12 Citations
4,164 Views
17 Pages

Prevalence and Genomic Diversity of Salmonella enterica Recovered from River Water in a Major Agricultural Region in Northwestern Mexico

  • Irvin González-López,
  • José Andrés Medrano-Félix,
  • Nohelia Castro-del Campo,
  • Osvaldo López-Cuevas and ,
  • Jean Pierre González-Gómez,
  • José Benigno Valdez-Torres,
  • José Roberto Aguirre-Sánchez,
  • Jaime Martínez-Urtaza,
  • Bruno Gómez-Gil and
  • Cristóbal Chaidez
  • + 7 authors+ 2 authors

Salmonella enterica is a leading cause of human gastrointestinal disease worldwide. Given that Salmonella is persistent in aquatic environments, this study examined the prevalence, levels and genotypic diversity of Salmonella isolates recovered from...

(This article belongs to the Special Issue Bacterial Genomics and Epidemiology)
  • Article
  • Open Access
22 Citations
4,309 Views
17 Pages

Occurrence and Characteristics of ESBL- and Carbapenemase- Producing Escherichia coli from Wild and Feral Birds in Greece

  • Zoi Athanasakopoulou,
  • Celia Diezel,
  • Sascha D. Braun,
  • Marina Sofia and ,
  • Alexios Giannakopoulos,
  • Stefan Monecke,
  • Dominik Gary,
  • Domenique Krähmer,
  • Dimitris C. Chatzopoulos and
  • Charalambos Billinis
  • + 12 authors+ 7 authors

Wild and feral birds are known to be involved in the maintenance and dissemination of clinically-important antimicrobial-resistant pathogens, such as extended-spectrum β-lactamase (ESBL) and carbapenemase-producing Enterobacteriaceae. The aim of...

(This article belongs to the Special Issue Wild Animal Pathogens and Antimicrobial Resistance)
  • Article
  • Open Access
7 Citations
4,721 Views
16 Pages

Bacillus velezensis is a widely used biocontrol agent closely related to B. amyloliquefaciens, and the two species cannot be distinguished by universal primers that are currently available. The study aimed to establish a rapid, specific detection app...

(This article belongs to the Special Issue Microbial Biotechnology in Agriculture)
  • Article
  • Open Access
3 Citations
3,615 Views
13 Pages

Clinical Features and Outcome of Multidrug-Resistant Osteoarticular Tuberculosis: A 12-Year Case Series from France

  • Isabelle Bonnet,
  • Elie Haddad,
  • Lorenzo Guglielmetti,
  • Pascale Bémer and ,
  • Louis Bernard,
  • Anne Bourgoin,
  • Rachel Brault,
  • Gaud Catho,
  • Eric Caumes and
  • Alexandra Aubry
  • + 28 authors+ 23 authors

The optimal treatment for osteoarticular infection due to multidrug-resistant tuberculosis strains (MDR-OATB) remains unclear. This study aims to evaluate the diagnosis, management and outcome of MDR-OATB in France. We present a case series of MDR-OA...

(This article belongs to the Section Antimicrobial Agents and Resistance)
  • Article
  • Open Access
25 Citations
5,407 Views
11 Pages

Objectives: Rapid antibiotic susceptibility testing (AST) for positive blood cultures can improve patient clinical outcomes if the time to an effective antimicrobial therapy is shortened. In this study, we tested the Quantamatrix dRAST system (QMAC-d...

  • Article
  • Open Access
15 Citations
3,487 Views
13 Pages

Antimicrobial Resistance, Enterotoxin and mec Gene Profiles of Staphylococcus aureus Associated with Beef-Based Protein Sources from KwaZulu-Natal Province, South Africa

  • Thembeka Thwala,
  • Evelyn Madoroba,
  • Tsolanku S. Maliehe,
  • Kudakwashe Magwedere and ,
  • Albert K. Basson and
  • Patrick Butaye
  • + 1 author+ 0 author

Annually, approximately 23,000 cases of food poisoning by Staphylococcus aureus enterotoxins are reported worldwide. The aim of this study was to determine the occurrence and characterize S. aureus on beef and beef products in South Africa. Organ mea...

(This article belongs to the Special Issue Foodborne Pathogens: Detection Methods, Food Safety, and Public Health)
  • Article
  • Open Access
15 Citations
3,955 Views
15 Pages

The Frequency of Occurrence of Resistance and Genes Involved in the Process of Adhesion and Accumulation of Biofilm in Staphylococcus aureus Strains Isolated from Tracheostomy Tubes

  • Kamil Drożdż,
  • Dorota Ochońska,
  • Łukasz Ścibik,
  • Monika Gołda-Cępa and ,
  • Katarzyna Biegun and
  • Monika Brzychczy-Włoch
  • + 1 author+ 0 author

Background: Bacterial biofilm on the surface of tracheostomy tubes (TTs) is a potential reservoir of potentially pathogenic bacteria, including S. aureus. For this reason, our study aimed to investigate biofilm production in vitro and the presence of...

(This article belongs to the Special Issue New Perspectives for the Control of Antimicrobial Resistance)
  • Article
  • Open Access
13 Citations
4,867 Views
15 Pages

Enhanced Antibiotic Tolerance of an In Vitro Multispecies Uropathogen Biofilm Model, Useful for Studies of Catheter-Associated Urinary Tract Infections

  • Jiapeng Hou,
  • Lutian Wang,
  • Martin Alm,
  • Peter Thomsen and ,
  • Tor Monsen,
  • Madeleine Ramstedt and
  • Mette Burmølle
  • + 2 authors+ 0 author

Catheter-associated urinary tract infections (CAUTI) are a common clinical concern as they can lead to severe, persistent infections or bacteremia in long-term catheterized patients. This type of CAUTI is difficult to eradicate, as they are caused by...

(This article belongs to the Special Issue Biofilms and Device-Associated Infections)
  • Article
  • Open Access
9 Citations
3,960 Views
17 Pages

Mucormycosis in COVID-19 Patients: A Case-Control Study

  • Awadh Kishor Pandit,
  • Poorvi Tangri,
  • Shubham Misra,
  • Madakasira Vasantha Padma Srivastava and ,
  • Sushma Bhatnagar,
  • Alok Thakar,
  • Kapil Sikka,
  • Smriti Panda,
  • Venugopalan Y. Vishnu and
  • Arvind Kairo
  • + 16 authors+ 11 authors

(1) Background: During the second wave of COVID-19, India faced a rapid and sudden surge of not only COVID19-delta variant cases but also mucormycosis, making the infection even more fatal. We conducted a study to determine factors associated with th...

(This article belongs to the Section Medical Microbiology)
  • Review
  • Open Access
43 Citations
5,551 Views
23 Pages

Invasive candidiasis (IC) is a systemic life-threatening infection of immunocompromised humans, but remains a relatively neglected disease among public health authorities. Ongoing assessments of disease epidemiology are needed to identify and map tre...

(This article belongs to the Section Antimicrobial Agents and Resistance)

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Microorganisms - ISSN 2076-2607