Hydrobiology

Successful aquatic ecosystem conversation strategies depend on high-quality data from monitoring studies and improved habitat requirement knowledge. Remote Underwater Video (RUV) is a non-extractive alternative to capture-based techniques for studying and monitoring fish and is increasingly used in smaller channels. This study uses field observations made with waterproof Sony HDR-AS100V action cameras positioned in stream channels to determine species and population during various flow conditions across three sites within the Credit River Watershed, Ontario, Canada. Six fish species were identified, and individual fish lengths were estimated using the inverse square law to proportionally adjust size scales to fish positions relative to the camera. Successful identification and measurements were limited by turbidity, with camera placements in >6 NTU conditions (18% of all placements) resulting in at least one fish observed in the frame. With over 24 h of video recordings with 94 individual video clips, the optimal filming duration was determined to be 20–25 min. RUV surveys provide managers with useful monitoring data regarding fish present in an environment in a cost-effective and efficient manner. Additionally, as the method is largely non-invasive, RUV surveys are especially useful for studying fish behaviour, sensitive or endangered species, and working in difficult-to-access channels (e.g., shallow, faster flow). Full article

This study aimed to investigate the allelopathic effect of live Egeria densa Planch. and its aqueous extracts in inhibiting the cyanobacterium Microcystis aeruginosa (Kützing) Lemmermann through a possible growth inhibition pathway. Under coexistence, the presence of live E. densa reduced the growth of M. aeruginosa by 48% compared to when M. aeruginosa was alone. Consequently, we prepared two separate aqueous extracts with distilled water: one from E. densa plants collected from monocultures, and the other from E. densa plants collected from co-cultivation with M. aeruginosa. At a concentration of 0.5 g/L, both extracts successfully suppressed the growth of M. aeruginosa throughout the 5-day exposure period. The extracts obtained from E. densa plants grown in a combined culture with M. aeruginosa showed significant growth-inhibiting capabilities compared to the extracts obtained from E. densa monoculture (p < 0.05). They showed 22% more growth inhibition compared to cultures exposed to monoculture extracts at day 5, indicating that the production of allelochemicals in E. densa was induced during co-existence with cyanobacteria. However, the higher concentrations (2 and 4 g/L) of both extracts did not effectively exhibit a successful inhibitive ability, possibly due to the presence of high nutrient concentrations, specifically PO₄³⁻, which may be potentially suppressing the activity of allelochemicals. Further studies are recommended in identifying the specific allelochemicals and exploring their practical implementation in the field. Full article

A project to mechanically remove an over-abundant population of cyprinids (Gila bicolor) was tested in a hydropower impoundment, Lemolo Lake (USA). The netting program removed 29.7 tons of fish (163 kg/ha) over a seven-year period that resulted in a reduction in the intensity and duration of cyanobacteria blooms. However, the suppression of the tui chub population apparently allowed for a residual population of kokanee (Oncorhynchus nerka) to proliferate. The resurgence of the kokanee, combined with the initiation of a rainbow trout stocking program, offset some of the gains in water quality achieved with the reduction of tui chub biomass. The dominant cyanobacterium present in Lemolo Lake transitioned to Gloeotrichia echinulata in 2013, but the majority of these colonies were apparently derived from an upstream lake. The changes in water quality from 2005–2013 were simulated for Lemolo Lake using the two-dimensional, hydrodynamic model, CE-QUAL-W2. The model reproduced many aspects of the water quality in Lemolo Lake and was used, in combination with a simple Bayesian model, to evaluate a number of potential scenarios for further improving water quality in the impoundment. Promoting a deeper drawdown of the hydroelectric impoundment during the winter to selectively increase entrainment of tui chub and kokanee, combined with continued netting targeted at tui chub, was judged to offer the greatest opportunity to manage the facility for water quality, fisheries and hydropower objectives. Full article

Acid-sensitive predation tags have recently been introduced to fisheries management. The objective of this study was to ascertain the impact of these tags on juvenile rainbow trout Oncorhynchus mykiss physiology and growth after implantation. Twenty approximately 13 g rainbow trout were placed into each of five tanks, with ten surgically implanted with dummy acid-sensitive predation tags and ten control fish not subjected to surgical procedures. Glucose, hematocrit, tag-retention, survival, and growth metrics were collected for 30 days post-surgery. Four tagged fish died while no control fish died. Tag retention was 76%, with tags lost in weeks 2, 3, and 4. Control fish were significantly longer and gained significantly more weight at the end of the experiment. Hematocrit levels for the tagged fish dropped significantly over the course of the trial and were 30% lower than those of the untagged control fish at the end of 30 days. Glucose levels were highly variable for both treatments. The results of this study indicate the negative impacts of predation tagging on the physiology of juvenile rainbow trout. Results from predation field trials should be interpreted with caution because the tagged fish are likely at a competitive disadvantage compared to their untagged conspecifics. Full article

This study aimed to evaluate the effects of the Martil River rehabilitation project and recently constructed dam infrastructures to reduce flood risks and to promote local socio-economic development on the ecological integrity of the river. The assessment focused on changes in fluvial landforms over time and the evaluation of aquatic ecosystems based on six physicochemical parameters (temperature, pH, electrical conductivity, dissolved oxygen, biochemical oxygen demand, and chemical oxygen demand), morpho-hydrological variables (stream width, water depth, and current speed), habitat indices (QBR, IHF, and MQI), and macroinvertebrate assemblages of EPT, OCH, and Chironomidae (Diptera) at five stations from autumn 2015 to spring 2018 (prior to and during the rehabilitation actions). The results showed that the river rehabilitation project led to profound changes in Martil River’s ecosystem and water quality over time. Physicochemical and habitat measurements at the rehabilitated sites revealed a major change in macroinvertebrate communities due to changes in fluvial landforms in relation to flow-sediment regimes. As a result, some typical species of lentic habitats disappeared, while alien, opportunistic, and lotic species appeared. Full article

Pangasiids are an economically significant group of catfish, and many pangasiids are threatened in the wild from anthropogenic pressures, including increases in fishing pressure, habitat degradation, and improperly managed aquaculture practices. This study demonstrates the usage of DNA barcoding of the Cytochrome Oxidase subunit I (COI) gene as an identification tool in detecting potentially threatening invasive pangasiid species by establishing the diversity and phylogenetic relationship of Pangasiidae catfishes in Peninsular Malaysia. A neighbour-joining (NJ) dendrogram (Kimura-2-parameter model) generated five clades to represent distinct genera. Pangasius was further subdivided into two clades (Clade A: Pangasius bocourti-P. djambal and Clade B: P. nasutus-P. conchophilus). Given the marginal genetic divergence, indigenous and non-native species should be treated cautiously in allopatrically distributed species. The analysis used Automatic Barcode Gap Discovery (ABGD) and revealed barcode gaps between the intraspecific and interspecific distances. The sequences were partitioned into five groupings, corresponding with the species delineation based on the distribution of pairwise differences, which could not be differentiated using the NJ dendrogram. ABGD allows the recognition of one or two additional species using the recursive approach, but other taxonomic methods should be considered for a solid conclusion. DNA barcoding demonstrates the identification of closely related species, thus justifying its application towards the conservation of these fish. Full article

Hypolimnetic hypoxia is expanding globally due to anthropogenic eutrophication and climate warming. Muskegon Lake, a Great Lakes estuary, experiences annually recurring hypoxia, impairing ecological, social, and economic benefits. Using high-frequency, time-series Muskegon Lake Observatory (MLO) data, we quantified the dynamics of hypoxia and developed a hypoxia severity index to estimate the spatiotemporal extent of hypoxia during 2011–2021. We also analyzed United States Geological Survey’s temperature and discharge data on the Muskegon River to explain the annual variability in the hypoxia severity index. Severe hypoxia occurred in warmer years with greater stratification, fewer wind mixing events, warmer winter river temperatures, and less winter and spring precipitation, as in 2012 and 2021. Conversely, milder hypoxia was prevalent in colder years with a later stratification onset, more mixing events, colder river temperatures, and more winter and spring precipitation, as in 2015 and 2019. Thus, knowledge of environmental conditions prior to the onset of stratification may be useful for predicting the potential severity of hypoxia for any year. While consistent multi-year trends in hypoxia were not discernible, our findings suggest that temperature and precipitation are major drivers of hypoxia and that as surface waters warm, it will lead to the further deoxygenation of Earth’s inland waters. Full article

The presence of pharmaceuticals in the aquatic environment presents a challenge to modern science. The most significant impact this can induce is the emergence of antibiotic resistance, which can lead to a global health emergency. It is important to note that the impact of pharmaceuticals in the aquatic environment is not limited to antibiotic resistance. Pharmaceuticals can also affect the behaviour and reproductive systems of aquatic organisms, with cascading effects on entire ecosystems. Numerous studies have reported the emergence of pharmaceuticals due to the uncontrolled disposal of polluted domestic, agricultural, and industrial wastewater in water bodies. This work discusses the potential of pharmaceuticals that on one hand are highly important for mankind, yet their non-judicious usage and disposal induce equally intriguing and problematic conditions to the health of aquatic systems. Pathways through which pharmaceutics can make their way into water bodies are discussed. Furthermore, the risk imposed by pharmaceuticals on aquatic life is also elaborated. The possible and pragmatic remediation methods through which pharmaceutical products can be treated are also discussed. Emphasis is placed on the potential of phytoremediation and advanced oxidative process, and the factors affecting the efficacy of these remediation methods are discussed. Full article

Streptomyces sp. N11-50 was isolated from deep-sea water and found to produce diketopiperazine (DKP) compounds such as albonoursin and cyclo(Phe-Leu). This study aimed to reveal the potential to synthesize diverse nonribosomal peptide and polyketide compounds as the other secondary metabolites different from DKP after clarifying the taxonomic position. Strain N11-50 was identified as Streptomyces albus, as it showed 100% 16S rRNA gene sequence similarities and 95.5% DNA–DNA relatedness to S. albus NBRC 13014^T. We annotated the nonribosomal peptide synthetase (NRPS) and polyketide synthase (PKS) gene clusters in the genome. Consequently, five NRPS, one hybrid PKS/NRPS, five type-I PKS and one type-II PKS gene clusters were observed, of which we predicted the products through bioinformatic analysis. These gene clusters were well conserved in already whole-genome sequence (WGS)-published strains belonging to S. albus. On the other hand, our taxonogenomic analysis revealed that three WGS-published S. albus strains were not S. albus. Two of the three should be classified as Streptomyces albidoflavus, and the remaining one was likely a new genomospecies. After reclassifying these appropriately, we demonstrated species-specific profiles of the NRPS and PKS gene clusters with little strain-level diversities. Full article

As impervious cover increases with urban development, stream channels are degraded by increased stormwater runoff, which negatively impacts stream habitat quality and benthic macroinvertebrate diversity. We examined the relationship between stream habitat diversity and aquatic insect taxa and trait richness and diversity at the watershed scale in 30 streams, covering a gradient of stream habitat quality. We then quantified the relationship between taxa and trait richness and diversity and seven microhabitats at the reach scale in ten streams with high habitat quality. We found that both taxa richness and diversity declined at a greater rate than trait richness and diversity along an in-stream habitat diversity gradient. Taxa richness was positively correlated with pools, runs, backwater, leaf packs, and riffles, while trait richness was positively correlated with runs, small wood, and riffles. Taxa diversity was positively correlated with pools and leaf packs while trait diversity was positively correlated with runs, leaf packs, small wood, and riffles. An indicator species analysis revealed that specific taxa and traits were associated with specific microhabitats or combinations of microhabitats. By correlating the taxa in urban streams with specific microhabitats, we can better evaluate the success of stream restoration in restoring stream function and in stimulating benthic macroinvertebrate recovery. Full article

The ability to colonize new habitat is essential for wild populations affected by disturbance or other forms of habitat change. For aquatic insects in small streams, overland flight is an important strategy for dispersal when barriers to in-stream migration exist and when populations are isolated in upland habitats. Two Ozark-endemic water beetles (Heterosternuta sulphuria and Heterosternuta phoebeae) have shown little overlap in distributions, with the former frequently occurring in small upland watersheds and the latter occurring in aquatic habitats farther downstream in larger watersheds. Because H. sulphuria has been associated with perennial aquatic habitats, we hypothesized that H. sulphuria individuals could exhibit low capacity for flight, thereby affecting population distributions over time. Laboratory flight observations showed that zero individuals of H. sulphuria flew (n = 67), whereas 17 of 76 individuals of H. phoebeae were observed to fly. Stream habitat drying experiments provided further evidence of the weak capacity for flight and overland migration of H. sulphuria, with low probabilities of survivorship in microhabitats exposed to drying. Weak flight capacity and apparent intolerance to habitat drying have important implications for the evolutionary history and conservation of H. sulphuria in small Ozark streams exposed to variable flow regimes and stream margins vulnerable to disturbances. Full article

Kelp forests are disappearing worldwide due to climate change and human stressors, highlighting the need for active interventions. A new restoration approach, “green gravel”, has been shown to be a potentially effective tool to restore endangered kelp forests. However, green gravel is still a novel technique that needs better experimentation and optimisation at all process stages. Contamination by other algal species is one of the critical factors in early-stage green gravel production because their overgrowth can lead to the loss of the seeded material. In this study, we assessed the effect of light intensity on kelp growth and on the coverage of contaminating algae on green gravel. Our results show that under high lights, kelps displayed faster growth (recruits on average more than three times the size and covering a six-times-larger area in high light intensity than in low light), but there was also a higher percentage of contaminating algae. In contrast, the green gravel cultivated under low lights showed almost no signs of algal contamination, but the area occupied by kelps and the length of the lamina were dramatically lower. Due to the cultivation conditions, opportunistic species can grow fast. This advantage is expected to disappear once the green gravel is deployed. To obtain cleaner cultures and to avoid the risk of losing the cultivated material, we would advise starting rearing under lower light intensity to reduce the risk of contamination but ensure kelp growth and then increasing the light intensity to boost it. Clear and appropriate protocols are absolutely necessary to minimise production costs and times and for the scaling-up of future attempts at marine forest restoration. Full article

Algal biomass is a prospective feedstock for the eco-sustainable production of many different products with added value, such as meals, feeds, and fuels. The remaining biomass from the algae can be used as raw material and can be transformed into useful secondary products after the important macromolecules have been removed. By optimizing algal biomass hydrolysate utilizing microbial fermentation, several studies demonstrated the generation of bioenergy (bioalcohol, biogas, and biohydrogen) and biochemicals (organic acids and biopolymers). Since the harvest and maintenance of sustainable algal cultivation incur considerable energy and economical prowess, developing products from algae remains a challenge to be countered in commercial applications. This is a typical bottleneck issue when processing algae for fuels or chemicals at the pilot scale. Implementation of integrated algae biorefinery methods can substantially reduce the cost of production and energy consumption. An algae-based green economy can be financially more viable and utilizable, especially for countries with weaker economies. This review’s goal is to examine the implementation of integrated biorefineries for the recovery of bioproducts generated from algae and potential applications. In this context, the life cycle analysis and business elements of a unified algal biorefinery are also addressed. Full article

Coral mortality is a global phenomenon of increasing magnitude, correlated with climate change. Prolonged marine heatwaves have particularly affected the north Aegean Sea in summer 2021, threatening shallow-water stony corals, such as Balanophyllia europaea and Cladocora caespitosa. To assess their population status, ten coastal, rocky-bottom stations dispersed in Natura 2000 sites of Chalkidiki (north Aegean) were surveyed using non-destructive techniques in autumn 2021. At each station, corals’ abundance was estimated in situ, by counting the number of B. europaea polyps within randomly placed 50 × 50 cm quadrats, and the number of C. caespitosa colonies along three replicate belt transects 1 × 10 m. The status of corals was qualitatively assigned as healthy, bleached (partially or complete), or in necrosis (partial or complete). B. europaea was found in 80% of stations; in total, 58.17% of the coral specimens were affected by necrosis. C. caespitosa was found in 30% of stations; in total, 27.49% of the coral colonies were partially bleached and 11.32% in necrosis. Another nine sessile invertebrates (sponges, bivalves, and ascidians) were observed in necrosis. These results highlight the need to establish monitoring programs on vulnerable sessile invertebrate populations along the Aegean Sea to assess climate change impacts. Full article

Maurolicus muelleri is a significant component of the marine ecosystem and has the potential to be a valuable fishery resource. However, in the Bay of Biscay, its primary biological traits remain unclear. This study presents data on the length distribution, age, growth, maturity ogive, spawning season, batch fecundity, and sex ratio for Maurolicus muelleri captured in the Bay of Biscay. The results showed that in spring, the adult spawners (ages of 1 and 2) were dominant in the catches, while in September, immature juveniles (age of 0) born in spring were mostly found. Using standard lengths as a basis, 50% of the fish were mature at 34.1 mm (both sexes combined), and the sex ratio, male to female, was 0.44:0.56. The proportion of females increased with length, and a 1:1 sex ratio was predicted at a standard length of 41.5 mm. The spawning season was allocated to at least between March and September, with a likely peak in May. The batch fecundity ranged from 114 to 919 oocytes/female, and increased with the weight and length of females. The results allowed us to interpret a life history strategy for this species, i.e., a high fecundity for females, which mostly participate in one or two reproductive seasons. Therefore, any possible exploitation of age 0 fish prior to spawning could lead to a decrease in the population from which recovery could be slow. Full article

Most of the human population lives in cities, and understanding their impact on freshwater environments is essential. Streams in cities face many environmental challenges that have been described in the concept of Urban Stream Syndrome. This concept illustrates urban streams’ biological, hydrological, chemical, and physical stressors. In tropical streams, these stressors impact shrimp, fish, insects, and other macroinvertebrates that inhabit the freshwater ecosystems. Freshwater shrimp are vulnerable to urban activities, physical, chemical, and ecological impacts. For this reason, these organisms have been used as biological indicators of stream health in the tropics. The shredder shrimp Xiphocaris elongata plays a fundamental role in the organic matter process and decomposition. The objectives of this study were to characterize the population of X. elongata and to identify differences in the abundance of X. elongata between urban and forest streams. Our results showed that highly urbanized areas have a significantly lower abundance of the shredder shrimp X. elongata than medium or low urban reach in the urban and forested watersheds. This study also showed that physicochemical and geomorphological variables are important environmental factors that influence the abundance of X. elongata in Puerto Rican streams. Full article

The Odonata are not typically regarded as informative taxa for stream bioassessment in North America compared to other insects, particularly when monitoring the ecological impacts of organic pollution. However, we hypothesized that stream-dwelling odonates are useful bioindicators of riparian conditions because vegetation associated with streams is used for oviposition and establishing breeding territories and is likely a cue for a suitable nymphal habitat. We sampled odonates from multiple microhabitats and all macroinvertebrates from riffle habitat in 12 Ozark Highlands (USA) spring streams along a gradient of riparian conditions. We also measured a standard suite of physical and chemical variables in each stream. We compared various aspects of the odonate and riffle macroinvertebrate assemblages among sites to evaluate sensitivity to variables associated with riparian structure compared to the other physical and chemical variables measured. The odonates were strongly associated with riparian-specific variables, while riffle macroinvertebrates were associated with riparian variables to a lesser degree. The additional environmental variables explained minimal variation in either assemblage. Overall, our results suggest that Odonata alone could be useful for biomonitoring associated with riparian structure around Ozark spring streams. The sensitivity of odonates to riparian conditions in other Nearctic regions should be further studied to identify regional and species-specific differences. Full article

Aquatic beetle diversity was compared between three study sites in the state of Tlaxcala, central Mexico: Stream 1 (San Ambrosio), stream 2 (San Tadeo), and a lake (Acuitlapilco). Sampling took place bimonthly during an annual cycle. A total of 2968 specimens were obtained, which were grouped into twenty three species, fifteen genera, and six families (Elmidae, Dryopidae, Dytiscidae, Gyrinidae, Haliplidae, and Hydrophilidae). Stream 2 showed the highest values of abundance (1570 individuals), while stream 1 had the highest richness (18 species). Abundance values showed two peaks each in rainy and dry seasons. The proportion of rare and dominant species was similar in all study sites. Based on species accumulation curves, the maximum estimated number of species has not been achieved in either of the three sites. Regarding alpha diversity (effective number of species), stream 1 presented the highest zero-order diversity estimated with 18.5 species. Regarding beta diversity, lotic systems (streams 1 and 2) presented a similarity of 75%. Finally, regarding the trophic structure of the adult aquatic beetle community, herbivores, predators, and decomposers were most representative in this study. Based on our results, Tlaxcala probably holds a significant diversity of aquatic beetles. This appears to indicate that species composition in geographic areas, regardless of their relatively small size, is worth documenting and, of course, preserving. Full article