Development and Application of Starter Cultures, 2nd Edition

A special issue of Fermentation (ISSN 2311-5637). This special issue belongs to the section "Fermentation for Food and Beverages".

Deadline for manuscript submissions: 30 July 2025 | Viewed by 3666

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Agris Sardegna, Agenzia Regionale per la Ricerca in Agricoltura, Associated Member of the JRU MIRRI-IT, Loc. Bonassai, SS291 km 18.600, 07100 Sassari, Italy
Interests: food microbiology; fermented food; microbial biodiversity; microbial culture collections; lactic acid bacteria; starter cultures; fingerprint; antibiotic resistance
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Guest Editor
Agris Sardegna, Agenzia Regionale per la Ricerca in Agricoltura, Associated Member of the JRU MIRRI-IT, Loc. Bonassai, SS291 km 18.600, 07100 Sassari, Italy
Interests: food microbiology; fermented food; microbial biodiversity; microbial culture collections; lactic acid bacteria; starter cultures; fingerprint; antibiotic resistance
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

In recent decades, starter cultures have been developed to aid raw material processing with the aim of obtaining different types of fermented food products. In fact, properly developed selected starters represent a convenient solution to easily and safely carry out the fermentation when the concentration of the microbiota colonizing the production environment and the raw material itself turns out to be inadequate, or natural starter cultures are difficult to obtain and manage.  

Different purposes can be pursued when developing a starter culture: (a) selecting a low, defined number of species/strains, on the basis of their strong aptitude to fulfil the biochemical processes required by each production technology and for their suitability to be grown in the laboratory; or (b) trying to reproduce autochthonous biodiverse natural cultures where an indefinite number of species and strains, starter and nonstarter (but crucial during the whole fermentation and ripening of food), coexist in equilibrium. Both choices have pros and cons. On one hand, selected cultures, because of and despite their high technological efficiency, easily become the dominant microbiota of the product, causing a dramatic decrease in microbial biodiversity and the loss of peculiar sensory characteristics of fermented food. In fact, this kind of culture is widely applied, at high concentration, to industrial level productions that do not possess geographic niches and typicity.

On the contrary, natural microbial communities have a strain composition which is not reproducible in any place other than that of their origin, contributing to preserve microbial biodiversity and enriching products with peculiar sensory features that bind them to the territory. Indeed, autochthonous natural starter cultures usually characterize the most typical and high-quality agri-food products. However, their technological performance is not standardized and their use is not risk-free since, together with useful autochthonous microorganisms, even pathogen or spoilage ones could potentially be inoculated and allowed to contaminate the product.

The goal of this Special Issue is to host innovative or review papers facing the challenge of developing starter cultures or, at least, laying the foundation for them, which could be applicable on an artisanal, pilot or industrial scale, able to guarantee safety, quality constancy, and technological performance reproducibility, and preserve biodiversity and peculiar sensory characteristics usually linked to traditional products, while overcoming the problems associated with the daily propagation of natural cultures. Furthermore, papers dealing with whether and how fermented product consumption could affect human gastro-intestinal tract microbiota, and eventually the health of the consumers, would be welcome.

Dr. Roberta Comunian
Dr. Luigi Chessa
Guest Editors

Manuscript Submission Information

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Keywords

  • starter cultures
  • fermented food
  • microbial biodiversity
  • metagenomics
  • traditional foods
  • food safety
  • antibiotic resistance
  • microbial culture collections
  • gut microbiota
  • probiotics

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Related Special Issue

Published Papers (3 papers)

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Research

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7 pages, 1119 KiB  
Communication
Preparing Sponge Dough for Making Bread Using Wheat Flour Cultured in 5% Saline
by Naganori Ohisa, Kazuto Endo and Toshikazu Komoda
Fermentation 2025, 11(4), 206; https://doi.org/10.3390/fermentation11040206 - 10 Apr 2025
Viewed by 263
Abstract
A 5% salt solution was used to make sponge dough from wheat flour. We devised a new starter (wheat flour saline culture) by adding 5% saline to wheat flour and incubating it for 24 h. The dough’s rise was enhanced by adding wheat [...] Read more.
A 5% salt solution was used to make sponge dough from wheat flour. We devised a new starter (wheat flour saline culture) by adding 5% saline to wheat flour and incubating it for 24 h. The dough’s rise was enhanced by adding wheat flour saline culture to the dough: after two hours, the dough volume increased by 20–30% compared to the control. Furthermore, the specific volume of the bread increased from 2.25 cm3/g in the control to 2.73–3.47 cm3/g when sugar or other auxiliary ingredients were not added to it. Wheat flour saline culture contained a large number of halotolerant bacteria. The addition of wheat flour saline culture increased the air bubble size and specific volume of the bread. Full article
(This article belongs to the Special Issue Development and Application of Starter Cultures, 2nd Edition)
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23 pages, 3717 KiB  
Article
Influence of Yeast Interactions on the Fermentation Process and Aroma Production in Synthetic Cocoa Pulp vs. Real Mucilage Media
by Lydie Besançon, Da Lorn, Christelle Kouamé, Joël Grabulos, Marc Lebrun, Angélique Fontana, Sabine Schorr-Galindo, Renaud Boulanger, Caroline Strub and Alexandre Colas de la Noue
Fermentation 2024, 10(12), 662; https://doi.org/10.3390/fermentation10120662 - 21 Dec 2024
Cited by 1 | Viewed by 1346
Abstract
Cocoa fermentation plays a key role in defining chocolate’s flavor, with yeasts being central to this process. This study aimed to explore intraspecific genetic diversity of major indigenous yeasts (i.e., Saccharomyces cerevisiae and Pichia kudriavzevii), and their potential interaction in the cocoa [...] Read more.
Cocoa fermentation plays a key role in defining chocolate’s flavor, with yeasts being central to this process. This study aimed to explore intraspecific genetic diversity of major indigenous yeasts (i.e., Saccharomyces cerevisiae and Pichia kudriavzevii), and their potential interaction in the cocoa pulp environment. Their metabolic intraspecific diversity was characterized in synthetic cocoa pulp medium. Then, Saccharomyces cerevisiae, Pichia kudriavzevii, and other strains were introduced to each other to evaluate their potential negative interaction. Interesting strain associations were selected to further explore their interaction in synthetic cocoa pulp medium as well as real fresh cocoa pulp. From a fermentation campaign in Ivory Coast, a set of Saccharomyces (S.) cerevisiae and Pichia (P.) kudriavzevii strains were isolated from batches classified according to their chocolate quality (i.e., standard, intermediate, or premium chocolate). Less abundant species (i.e., Torulaspora franciscae, Kluyveromyces marxianus) were also isolated and tested for their potential negative interactions with S. cerevisiae and P. kudriavzevii. A set of strains were selected and cultured in single and in co-culture in a minimal cocoa pulp synthetic medium and in fresh cocoa pulp to highlight potential positive and/or negative interactions regarding fermentative aroma profile (i.e., higher alcohols, acetate esters, medium-chain fatty acids, and ethyl esters). The results highlighted the dominance of S. cerevisiae in fermentation kinetics and medium- to long-chain ester production, contrasted with P. kudriavzevii’s efficiency in short-chain ester synthesis. Intraspecific aroma profile variations can be pointed out. The co-cultures of P. kudriavzevii and S. cerevisiae strains isolated from the premium chocolate batch had a positive impact on the fermented pulp aroma profile. Negative interactions were observed with Torulaspora franciscae, which eliminated P. kudriavzevii’s aroma expression. Finally, the comparison of the data obtained for the minimal cocoa pulp synthetic medium compared to the cocoa pulp allowed us to draw conclusions about the use of synthetic media for studying cocoa fermentation. These findings emphasize the complex microbial interactions in cocoa fermentation that could shape future cocoa bean aroma. Full article
(This article belongs to the Special Issue Development and Application of Starter Cultures, 2nd Edition)
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Review

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18 pages, 766 KiB  
Review
Starter Cultures for the Production of Fermented Table Olives: Current Status and Future Perspectives
by Marilisa Giavalisco, Emanuela Lavanga, Annamaria Ricciardi and Teresa Zotta
Fermentation 2024, 10(7), 351; https://doi.org/10.3390/fermentation10070351 - 12 Jul 2024
Viewed by 1472
Abstract
Table olives are widely produced and consumed in the Mediterranean area. The production of table olives is mainly based on spontaneous fermentations, which may have several drawbacks (e.g., the development of undesirable microorganisms; organoleptic defects) compared to fermentative processes driven by starter cultures [...] Read more.
Table olives are widely produced and consumed in the Mediterranean area. The production of table olives is mainly based on spontaneous fermentations, which may have several drawbacks (e.g., the development of undesirable microorganisms; organoleptic defects) compared to fermentative processes driven by starter cultures (typically lactic acid bacteria, yeasts, or their combinations). Studies on the effect of starter cultures have been mainly focused on some technological traits (e.g., acidifying capability, the degradation of phenolic compounds, metabolite production) and, to a lesser extent, on the dynamics of olive microbiota during fermentation. Recently, the application of Amplicon Targeted—High-Throughput Sequencing (AT–HTS) has enabled improvement of the knowledge on the composition and evolution of microbial communities during fermentations, including the role of starter cultures. The AT–HTS approaches used so far, however, have several constraints (e.g., poor investigation of mycobiota and metabolically active microorganisms) that do not allow a full understanding of the complex microbial interactions occurring in fermented olives. The aim of this review is to provide insights into the role of starter cultures in fermented olives and highlight the need to apply, as for other fermented foods, integrated “omics” approaches to predict and exploit their metabolic potential to improve the final properties of products. Full article
(This article belongs to the Special Issue Development and Application of Starter Cultures, 2nd Edition)
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