Nonsense-Mediated mRNA Decay: From Molecular Mechanism to Therapeutic Perspectives 2.0

A special issue of Biomedicines (ISSN 2227-9059). This special issue belongs to the section "Gene and Cell Therapy".

Deadline for manuscript submissions: closed (30 June 2023) | Viewed by 4318

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CANTHER—Cancer Heterogeneity, Plasticity and Resistance to Therapies, CHU Lille, Institut Pasteur de Lille, INSERM, UMR9020-U1277, Université de Lille, 59000 Lille, France
Interests: mRNA; nonsense mutations
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Dear Colleagues,

Quality-control mechanisms ensure the correct expression of the information contained in a gene. The most-studied quality-control mechanism is certainly that responsible for eliminating mRNAs carrying a premature stop codon, called nonsense-mediated mRNA decay (NMD). NMD was first described in yeast in 1979 by Régine Losson and François Lacroute, and it has only been 40 years since NMD was also observed in human cells by Lynne Maquat and colleagues. Since then, the molecular mechanism has been studied in detail, from the identification of the main factors involved in this mechanism to its complex connections with other cellular metabolic pathways. The interest in NMD also comes from the fact that its role as a cell cleaner of mRNAs carrying premature stop codons links it to the origin of approximately 10% of cases of genetic diseases. Some groups therefore seek to inhibit it, while others rather try to activate it, by means of various molecules in order to propose new therapeutic approaches for the treatment of genetic diseases, as well as to study the mechanism of NMD in a particular configuration. Much remains to be learned about this mechanism for understanding the chains of reactions and interactions that lead to letting an mRNA continue its translation or, on the contrary, very quickly degrading an mRNA carrying a premature stop codon. A molecular understanding of this mechanism is necessary if we want to be able to control it and thus manage the fate of certain mRNAs, whether pathological or not. This Special Issue aims to provide up-to-date molecular insight into the nonsense-mediated mRNA decay mechanism, its regulation and its involvement in various pathologies.

Dr. Fabrice Lejeune
Guest Editor

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Keywords

  • premature termination codon
  • nonsense-mediated mRNA decay
  • mRNA decay
  • UPF proteins
  • SMG proteins
  • exon junction complex
  • p-bodies
  • pioneer round of translation
  • gene expression and regulation
  • human genetic diseases

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Published Papers (2 papers)

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Research

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12 pages, 1910 KiB  
Article
Identifying Potent Nonsense-Mediated mRNA Decay Inhibitors with a Novel Screening System
by Julie Carrard, Fiona Ratajczak, Joséphine Elsens, Catherine Leroy, Rebekah Kong, Lucie Geoffroy, Arnaud Comte, Guy Fournet, Benoît Joseph, Xiubin Li, Sylvie Moebs-Sanchez and Fabrice Lejeune
Biomedicines 2023, 11(10), 2801; https://doi.org/10.3390/biomedicines11102801 - 16 Oct 2023
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Abstract
Nonsense-mediated mRNA decay (NMD) is a quality control mechanism that degrades mRNAs carrying a premature termination codon. Its inhibition, alone or in combination with other approaches, could be exploited to develop therapies for genetic diseases caused by a nonsense mutation. This, however, requires [...] Read more.
Nonsense-mediated mRNA decay (NMD) is a quality control mechanism that degrades mRNAs carrying a premature termination codon. Its inhibition, alone or in combination with other approaches, could be exploited to develop therapies for genetic diseases caused by a nonsense mutation. This, however, requires molecules capable of inhibiting NMD effectively without inducing toxicity. We have built a new screening system and used it to identify and validate two new molecules that can inhibit NMD at least as effectively as cycloheximide, a reference NMD inhibitor molecule. These new NMD inhibitors show no cellular toxicity at tested concentrations and have a working concentration between 6.2 and 12.5 µM. We have further validated this NMD-inhibiting property in a physiopathological model of lung cancer in which the TP53 gene carries a nonsense mutation. These new molecules may potentially be of interest in the development of therapies for genetic diseases caused by a nonsense mutation. Full article
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Review

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27 pages, 3743 KiB  
Review
Nonsense-Mediated mRNA Decay Factor Functions in Human Health and Disease
by Lingling Sun, Justine Mailliot and Christiane Schaffitzel
Biomedicines 2023, 11(3), 722; https://doi.org/10.3390/biomedicines11030722 - 27 Feb 2023
Cited by 3 | Viewed by 2455
Abstract
Nonsense-mediated mRNA decay (NMD) is a cellular surveillance mechanism that degrades mRNAs with a premature stop codon, avoiding the synthesis of C-terminally truncated proteins. In addition to faulty mRNAs, NMD recognises ~10% of endogenous transcripts in human cells and downregulates their expression. The [...] Read more.
Nonsense-mediated mRNA decay (NMD) is a cellular surveillance mechanism that degrades mRNAs with a premature stop codon, avoiding the synthesis of C-terminally truncated proteins. In addition to faulty mRNAs, NMD recognises ~10% of endogenous transcripts in human cells and downregulates their expression. The up-frameshift proteins are core NMD factors and are conserved from yeast to human in structure and function. In mammals, NMD diversified into different pathways that target different mRNAs employing additional NMD factors. Here, we review our current understanding of molecular mechanisms and cellular roles of NMD pathways and the involvement of more specialised NMD factors. We describe the consequences of mutations in NMD factors leading to neurodevelopmental diseases, and the role of NMD in cancer. We highlight strategies of RNA viruses to evade recognition and decay by the NMD machinery. Full article
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