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Proteomes, Volume 9, Issue 4

December 2021 - 11 articles

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Articles (11)

  • Article
  • Open Access
7 Citations
4,283 Views
21 Pages

13 December 2021

Germinated paddy rice (GPR) could be a good alternative feed source for poultry with stocking density and heat stress problems. A total of 72 Hy-line Brown laying hens raised under low (LSD, 0.12 m2/bird) and high stocking densities (HSD, 0.06 m2/bir...

  • Article
  • Open Access
14 Citations
4,568 Views
14 Pages

Molecular Mapping of Urinary Complement Peptides in Kidney Diseases

  • Ralph Wendt,
  • Justyna Siwy,
  • Tianlin He,
  • Agnieszka Latosinska,
  • Thorsten Wiech,
  • Peter F. Zipfel,
  • Aggeliki Tserga,
  • Antonia Vlahou,
  • Harald Rupprecht and
  • Lorenzo Catanese
  • + 2 authors

13 December 2021

Defective complement activation has been associated with various types of kidney disease. This led to the hypothesis that specific urine complement fragments may be associated with kidney disease etiologies, and disease progression may be reflected b...

  • Article
  • Open Access
10 Citations
4,993 Views
12 Pages

Determining Plasma Protein Variation Parameters as a Prerequisite for Biomarker Studies—A TMT-Based LC-MSMS Proteome Investigation

  • Lou-Ann C. Andersen,
  • Nicolai Bjødstrup Palstrøm,
  • Axel Diederichsen,
  • Jes Sanddal Lindholt,
  • Lars Melholt Rasmussen and
  • Hans Christian Beck

1 December 2021

Specific plasma proteins serve as valuable markers for various diseases and are in many cases routinely measured in clinical laboratories by fully automated systems. For safe diagnostics and monitoring using these markers, it is important to ensure a...

  • Article
  • Open Access
11 Citations
6,417 Views
19 Pages

Comparison of Sample Preparation Methods for Shotgun Proteomic Studies in Aquaculture Species

  • Mário Jorge Araújo,
  • Maria Lígia Sousa,
  • Aldo Barreiro Felpeto,
  • Maria V. Turkina,
  • Elza Fonseca,
  • José Carlos Martins,
  • Vítor Vasconcelos and
  • Alexandre Campos

16 November 2021

Proteomics has been recently introduced in aquaculture research, and more methodological studies are needed to improve the quality of proteomics studies. Therefore, this work aims to compare three sample preparation methods for shotgun LC–MS/MS prote...

  • Review
  • Open Access
10 Citations
6,182 Views
14 Pages

Proteome of the Luminal Surface of the Blood–Brain Barrier

  • Jennifer J. Hill,
  • Arsalan S. Haqqani and
  • Danica B. Stanimirovic

10 November 2021

Interrogation of the molecular makeup of the blood–brain barrier (BBB) using proteomic techniques has contributed to the cataloguing and functional understanding of the proteins uniquely organized at this specialized interface. The majority of proteo...

  • Article
  • Open Access
16 Citations
6,610 Views
14 Pages

3 November 2021

Conventional solvent-based precipitation makes it challenging to obtain a high recovery of low mass peptides. However, we previously demonstrated that the inclusion of salt ions, specifically ZnSO4, together with high concentrations of acetone, maxim...

  • Article
  • Open Access
3,519 Views
16 Pages

2 November 2021

Transglutaminases are a class of enzymes that catalyze the formation of a protein:protein cross-link between a lysine and a glutamine residue. These cross-links play important roles in diverse biological processes. Analysis of cross-linking sites in...

  • Article
  • Open Access
8 Citations
4,931 Views
20 Pages

Identification of Protein Biomarker Signatures for Acute Myeloid Leukemia (AML) Using Both Nontargeted and Targeted Approaches

  • Paul Dowling,
  • Ciara Tierney,
  • Katie Dunphy,
  • Juho J. Miettinen,
  • Caroline A. Heckman,
  • Despina Bazou and
  • Peter O’Gorman

30 October 2021

Acute myeloid leukemia (AML) is characterized by an increasing number of clonal myeloid blast cells which are incapable of differentiating into mature leukocytes. AML risk stratification is based on genetic background, which also serves as a means to...

  • Article
  • Open Access
7 Citations
4,800 Views
26 Pages

23 October 2021

The production of cassava is threatened by the geminivirus South African cassava mosaic virus (SACMV), which causes cassava mosaic disease. Cassava landrace TME3 shows tolerance to SACMV, while T200 is highly susceptible. This study aimed to identify...

  • Article
  • Open Access
9 Citations
3,708 Views
14 Pages

Subcellular Proteomics to Understand Promotive Effect of Plant-Derived Smoke Solution on Soybean Root

  • Yusuke Murashita,
  • Takumi Nishiuchi,
  • Shafiq Ur Rehman and
  • Setsuko Komatsu

Plant-derived smoke solution enhances soybean root growth; however, its mechanism is not clearly understood. Subcellular proteomics techniques were used for underlying roles of plant-derived smoke solution on soybean root growth. The fractions of mem...

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Proteomes - ISSN 2227-7382