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Proteomes, Volume 6, Issue 4

2018 December - 19 articles

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Articles (19)

  • Article
  • Open Access
11 Citations
5,291 Views
22 Pages

17 December 2018

Glutamatergic projections from the cortex and dopaminergic projections from the substantia nigra or ventral tegmental area synapse on dendritic spines of specific GABAergic medium spiny neurons (MSNs) in the striatum. Direct pathway MSNs (dMSNs) are...

  • Feature Paper
  • Review
  • Open Access
16 Citations
6,569 Views
18 Pages

From Synapse to Function: A Perspective on the Role of Neuroproteomics in Elucidating Mechanisms of Drug Addiction

  • Luis A. Natividad,
  • Matthew W. Buczynski,
  • Daniel B. McClatchy and
  • John R. Yates

9 December 2018

Drug addiction is a complex disorder driven by dysregulation in molecular signaling across several different brain regions. Limited therapeutic options currently exist for treating drug addiction and related psychiatric disorders in clinical populati...

  • Feature Paper
  • Review
  • Open Access
33 Citations
7,678 Views
23 Pages

9 December 2018

Cell-type-specific analysis has become a major focus for many investigators in the field of neuroscience, particularly because of the large number of different cell populations found in brain tissue that play roles in a variety of developmental and b...

  • Feature Paper
  • Article
  • Open Access
7 Citations
6,499 Views
18 Pages

Actinobaculum massiliense Proteome Profiled in Polymicrobial Urethral Catheter Biofilms

  • Yanbao Yu,
  • Tamara Tsitrin,
  • Harinder Singh,
  • Sebastian N. Doerfert,
  • Maria V. Sizova,
  • Slava S. Epstein and
  • Rembert Pieper

9 December 2018

Actinobaculum massiliense, a Gram-positive anaerobic coccoid rod colonizing the human urinary tract, belongs to the taxonomic class of Actinobacteria. We identified A. massiliense as a cohabitant of urethral catheter biofilms (CB). The CBs also harbo...

  • Review
  • Open Access
32 Citations
5,817 Views
16 Pages

2 December 2018

Colorectal cancer is the third most common and the fourth most lethal cancer worldwide. In most of cases, patients are diagnosed at an advanced or even metastatic stage, thus explaining the high mortality. The lack of proper clinical tests and the co...

  • Article
  • Open Access
49 Citations
14,086 Views
27 Pages

Mapping the Proteome of the Synaptic Cleft through Proximity Labeling Reveals New Cleft Proteins

  • Tony Cijsouw,
  • Austin M. Ramsey,
  • TuKiet T. Lam,
  • Beatrice E. Carbone,
  • Thomas A. Blanpied and
  • Thomas Biederer

28 November 2018

Synapses are specialized neuronal cell-cell contacts that underlie network communication in the mammalian brain. Across neuronal populations and circuits, a diverse set of synapses is utilized, and they differ in their molecular composition to enable...

  • Review
  • Open Access
25 Citations
7,449 Views
12 Pages

12 November 2018

Hallmarks of Alzheimer’s disease (AD), a progressive neurodegenerative disease causing dementia, include protein aggregates such as amyloid beta plaques and tau neurofibrillary tangles in a patient’s brain. Understanding the complete comp...

  • Feature Paper
  • Article
  • Open Access
4 Citations
5,330 Views
15 Pages

Paraquat-Mediated Oxidative Stress in Anopheles gambiae Mosquitoes Is Regulated by An Endoplasmic Reticulum (ER) Stress Response

  • Brian B. Tarimo,
  • Henry Chun Hin Law,
  • Dingyin Tao,
  • Rebecca Pastrana-Mena,
  • Stefan M. Kanzok,
  • Joram J. Buza and
  • Rhoel R. Dinglasan

12 November 2018

Paraquat is a potent superoxide (O2)-inducing agent that is capable of inducing an oxidative imbalance in the mosquito midgut. This oxidative imbalance can super-stress the malaria parasite, leading to arrested development in the mosquito midgut and...

  • Article
  • Open Access
24 Citations
5,768 Views
20 Pages

A Comparative Quantitative LC-MS/MS Profiling Analysis of Human Pancreatic Adenocarcinoma, Adjacent-Normal Tissue, and Patient-Derived Tumour Xenografts

  • Orla Coleman,
  • Michael Henry,
  • Fiona O'Neill,
  • Sandra Roche,
  • Niall Swan,
  • Lorraine Boyle,
  • Jean Murphy,
  • Justine Meiller,
  • Neil T. Conlon and
  • Martin Clynes
  • + 8 authors

6 November 2018

Pancreatic ductal adenocarcinoma (PDAC) is one of the deadliest cancers worldwide; it develops in a relatively symptom-free manner, leading to rapid disease progression and metastasis, leading to a 5-year survival rate of less than 5%. A lack of depe...

  • Communication
  • Open Access
10 Citations
5,595 Views
10 Pages

Inhibiting Arginine Methylation as a Tool to Investigate Cross-Talk with Methylation and Acetylation Post-Translational Modifications in a Glioblastoma Cell Line

  • Sabrina Francesca Samuel,
  • Alistair James Marsden,
  • Srihari Deepak,
  • Francisco Rivero,
  • John Greenman and
  • Pedro Beltran-Alvarez

20 October 2018

Glioblastomas (GBM) are the most common grade 4 brain tumours; patients have very poor prognosis with an average survival of 15 months after diagnosis. Novel research lines have begun to explore aberrant protein arginine methylation (ArgMe) as a poss...

  • Article
  • Open Access
12 Citations
4,339 Views
9 Pages

Identification of Potential Plasma Biomarkers for Abdominal Aortic Aneurysm Using Tandem Mass Tag Quantitative Proteomics

  • Anders E. Henriksson,
  • Markus Lindqvist,
  • Carina Sihlbom,
  • Jörgen Bergström and
  • Dan Bylund

18 October 2018

Plasma biomarkers that identify abdominal aortic aneurysm (AAA) rupture risk would greatly assist in stratifying patients with small aneurysms. Identification of such biomarkers has hitherto been unsuccessful over a range of studies using different m...

  • Article
  • Open Access
11 Citations
5,924 Views
16 Pages

Evaluation of the Phosphoproteome of Mouse Alpha 4/Beta 2-Containing Nicotinic Acetylcholine Receptors In Vitro and In Vivo

  • Megan B. Miller,
  • Rashaun S. Wilson,
  • TuKiet T. Lam,
  • Angus C. Nairn and
  • Marina R. Picciotto

15 October 2018

Activation of nicotinic acetylcholine receptors containing α4 and β2 subunits (α4/β2* nAChRs) in the mammalian brain is necessary for nicotine reinforcement and addiction. We previously identified interactions between α4/&...

  • Article
  • Open Access
4 Citations
5,082 Views
19 Pages

Phosphoproteomic Analysis of the Amygdala Response to Adolescent Glucocorticoid Exposure Reveals G-Protein Coupled Receptor Kinase 2 as a Target for Reducing Motivation for Alcohol

  • Megan L. Bertholomey,
  • Kathryn Stone,
  • TuKiet T. Lam,
  • Seojin Bang,
  • Wei Wu,
  • Angus C. Nairn,
  • Jane R. Taylor and
  • Mary M. Torregrossa

12 October 2018

Early life stress is associated with risk for developing alcohol use disorders (AUDs) in adulthood. Though the neurobiological mechanisms underlying this vulnerability are not well understood, evidence suggests that aberrant glucocorticoid and noradr...

  • Review
  • Open Access
11 Citations
8,434 Views
13 Pages

Synaptic plasticity has been considered a key mechanism underlying many brain functions including learning, memory, and drug addiction. An increase or decrease in synaptic activity of the α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid rec...

  • Review
  • Open Access
18 Citations
12,069 Views
15 Pages

Exploring Morphine-Triggered PKC-Targets and Their Interaction with Signaling Pathways Leading to Pain via TrkA

  • Darlene A. Pena,
  • Mariana Lemos Duarte,
  • Dimitrius T. Pramio,
  • Lakshmi A. Devi and
  • Deborah Schechtman

It is well accepted that treatment of chronic pain with morphine leads to μ opioid receptor (MOR) desensitization and the development of morphine tolerance. MOR activation by the selective peptide agonist, D-Ala2, N-MePhe4, Gly-ol]-enkephalin(DAMG...

  • Article
  • Open Access
29 Citations
6,780 Views
17 Pages

Early Responses to Severe Drought Stress in the Arabidopsis thaliana Cell Suspension Culture Proteome

  • May Alqurashi,
  • Marco Chiapello,
  • Chantal Bianchet,
  • Francesco Paolocci,
  • Kathryn S. Lilley and
  • Christoph Gehring

Abiotic stresses are considered the most deleterious factor affecting growth and development of plants worldwide. Such stresses are largely unavoidable and trigger adaptive responses affecting different cellular processes and target different compart...

  • Feature Paper
  • Article
  • Open Access
10 Citations
4,932 Views
17 Pages

Fyn Regulates Binding Partners of Cyclic-AMP Dependent Protein Kinase A

  • Anna M. Schmoker,
  • Samuel A. Barritt,
  • Marion E. Weir,
  • Jacqueline E. Mann,
  • Tyler C. Hogan,
  • Bryan A. Ballif and
  • Paula B. Deming

29 September 2018

The cAMP-dependent protein kinase A (PKA) is a serine/threonine kinase involved in many fundamental cellular processes, including migration and proliferation. Recently, we found that the Src family kinase Fyn phosphorylates the catalytic subunit of P...

  • Article
  • Open Access
10 Citations
6,403 Views
22 Pages

Granulocyte-Colony-Stimulating Factor Alters the Proteomic Landscape of the Ventral Tegmental Area

  • Nicholas L. Mervosh,
  • Rashaun Wilson,
  • Navin Rauniyar,
  • Rebecca S. Hofford,
  • Munir Gunes Kutlu,
  • Erin S. Calipari,
  • TuKiet T. Lam and
  • Drew D. Kiraly

23 September 2018

Cocaine addiction is characterized by aberrant plasticity of the mesolimbic dopamine circuit, leading to dysregulation of motivation to seek and take drug. Despite the significant toll that cocaine use disorder exacts on society, there are currently...

  • Article
  • Open Access
25 Citations
6,712 Views
20 Pages

Proteases Shape the Chlamydomonas Secretome: Comparison to Classical Neuropeptide Processing Machinery

  • Raj Luxmi,
  • Crysten Blaby-Haas,
  • Dhivya Kumar,
  • Navin Rauniyar,
  • Stephen M. King,
  • Richard E. Mains and
  • Betty A. Eipper

23 September 2018

The recent identification of catalytically active peptidylglycine α-amidating monooxygenase (PAM) in Chlamydomonas reinhardtii, a unicellular green alga, suggested the presence of a PAM-like gene and peptidergic signaling in the last eukaryotic...

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Proteomes - ISSN 2227-7382