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Search Results (321)

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Keywords = chemical and fertility indexes

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19 pages, 5967 KiB  
Article
Chitosan Application Improves the Growth and Physiological Parameters of Tomato Crops
by Juan José Reyes-Pérez, Luis Tarquino Llerena-Ramos, Wilmer Tezara, Víctor Reynel, Luis Guillermo Hernández-Montiel and Antonio Juárez-Maldonado
Horticulturae 2025, 11(8), 878; https://doi.org/10.3390/horticulturae11080878 - 28 Jul 2025
Viewed by 341
Abstract
Tomato crops are treated with high concentrations of synthetic fertilizers and insecticides to increase yields, but the careless use of these chemicals harms the environment and human health and affects plant pathogen resistance. The effect of foliar spray of three concentrations of chitosan [...] Read more.
Tomato crops are treated with high concentrations of synthetic fertilizers and insecticides to increase yields, but the careless use of these chemicals harms the environment and human health and affects plant pathogen resistance. The effect of foliar spray of three concentrations of chitosan (500, 1000, and 2000 mg L−1) on plant growth, yield, fruit quality, and physiological performance in two tomato varieties (Floradade and Candela F1) was studied. Physiological traits such as photosynthesis, chlorophyll content, and leaf area index of the plants were positively affected by chitosan, an effective compound that biostimulates growth, with increases in biomass of organs with respect to the control treatment. Chitosan also improved tomato quality, such as increases in polyphenols, antioxidant capacity, flavonoids, carotenoids, vitamin C, and total soluble solids in both tomato varieties. Finally, yield increased by 76.4% and 65.4% in Floradade and Candela F1, respectively. The responses of tomato plants to chitosan application were different depending on the variety evaluated, indicating a differential response to the biostimulant. The use of chitosan in agriculture is a tool that has no negative effects on plants and the environment and can increase the productive capacity of tomato plants. Full article
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19 pages, 6150 KiB  
Article
Evaluation of Eutrophication in Small Reservoirs in Northern Agricultural Areas of China
by Qianyu Jing, Yang Shao, Xiyuan Bian, Minfang Sun, Zengfei Chen, Jiamin Han, Song Zhang, Shusheng Han and Haiming Qin
Diversity 2025, 17(8), 520; https://doi.org/10.3390/d17080520 - 26 Jul 2025
Viewed by 178
Abstract
Small reservoirs have important functions, such as water resource guarantee, flood control and drought resistance, biological habitat and maintaining regional economic development. In order to better clarify the impact of agricultural activities on the nutritional status of water bodies in small reservoirs, zooplankton [...] Read more.
Small reservoirs have important functions, such as water resource guarantee, flood control and drought resistance, biological habitat and maintaining regional economic development. In order to better clarify the impact of agricultural activities on the nutritional status of water bodies in small reservoirs, zooplankton were quantitatively collected from four small reservoirs in the Jiuxianshan agricultural area of Qufu, Shandong Province, in March and October 2023, respectively. The physical and chemical parameters in sampling points were determined simultaneously. Meanwhile, water samples were collected for nutrient salt analysis, and the eutrophication of water bodies in four reservoirs was evaluated using the comprehensive nutrient status index method. The research found that the species richness of zooplankton after farming (100 species) was significantly higher than that before farming (81 species) (p < 0.05). On the contrary, the dominant species of zooplankton after farming (7 species) were significantly fewer than those before farming (11 species). The estimation results of the standing stock of zooplankton indicated that the abundance and biomass of zooplankton after farming (92.72 ind./L, 0.13 mg/L) were significantly higher than those before farming (32.51 ind./L, 0.40 mg/L) (p < 0.05). Community similarity analysis based on zooplankton abundance (ANOSIM) indicated that there were significant differences in zooplankton communities before and after farming (R = 0.329, p = 0.001). The results of multi-dimensional non-metric sorting (NMDS) showed that the communities of zooplankton could be clearly divided into two: pre-farming communities and after farming communities. The Monte Carlo test results are as follows (p < 0.05). Transparency (Trans), pH, permanganate index (CODMn), electrical conductivity (Cond) and chlorophyll a (Chl-a) had significant effects on the community structure of zooplankton before farming. Total nitrogen (TN), total phosphorus (TP) and electrical conductivity (Cond) had significant effects on the community structure of zooplankton after farming. The co-linearity network analysis based on zooplankton abundance showed that the zooplankton community before farming was more stable than that after farming. The water evaluation results based on the comprehensive nutritional status index method indicated that the water conditions of the reservoirs before farming were mostly in a mild eutrophic state, while the water conditions of the reservoirs after farming were all in a moderate eutrophic state. The results show that the nutritional status of small reservoirs in agricultural areas is significantly affected by agricultural activities. The zooplankton communities in small reservoirs underwent significant changes driven by alterations in the reservoir water environment and nutritional status. Based on the main results of this study, we suggested that the use of fertilizers and pesticides should be appropriately reduced in future agricultural activities. In order to better protect the water quality and aquatic ecology of the water reservoirs in the agricultural area. Full article
(This article belongs to the Special Issue Diversity and Ecology of Freshwater Plankton)
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19 pages, 2388 KiB  
Article
Impact of Grassland Management System Intensity on Composition of Functional Groups and Soil Chemical Properties in Semi-Natural Grasslands
by Urška Lisec, Maja Prevolnik Povše, Miran Podvršnik and Branko Kramberger
Plants 2025, 14(15), 2274; https://doi.org/10.3390/plants14152274 - 24 Jul 2025
Viewed by 291
Abstract
Semi-natural grasslands are some of the most species-rich habitats in Europe and provide important ecosystem services such as biodiversity conservation, carbon sequestration and soil fertility maintenance. This study investigates how different intensities of grassland management affect the composition of functional groups and soil [...] Read more.
Semi-natural grasslands are some of the most species-rich habitats in Europe and provide important ecosystem services such as biodiversity conservation, carbon sequestration and soil fertility maintenance. This study investigates how different intensities of grassland management affect the composition of functional groups and soil chemical properties. Five grassland management systems were analyzed: Cut3—three cuts per year; LGI—low grazing intensity; CG—combined cutting and grazing; Cut4—four cuts per year; and HGI—high grazing intensity. The functional groups assessed were grasses, legumes and forbs, while soil samples from three depths (0–10, 10–20 and 20–30 cm) were analyzed for their chemical properties (soil organic carbon—SOC; soil total nitrogen—STN; inorganic soil carbon—SIC; soil organic matter—SOM; potassium oxide—K2O; phosphorus pentoxide—P2O5; C/N ratio; and pH) and physical properties (volumetric soil water content—VWC; bulk density—BD; and porosity—POR). The results showed that less intensive systems had a higher proportion of legumes, while species diversity, as measured via the Shannon index, was the highest in the Cut4 system. The CG system tended to have the highest SOC and STN at a 0–10 cm depth, with a similar trend observed for SOCstock at a 0–30 cm depth. The Cut4, HGI and CG systems also had an increased STNstock. Both grazing systems had the highest P2O5 content. A tendency towards a higher BD was observed in the top 10 cm of soil in the more intensive systems. Choosing a management strategy that is tailored to local climate and site conditions is crucial for maintaining grassland stability, enhancing carbon sequestration and promoting long-term sustainability in the context of climate change. Full article
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23 pages, 2173 KiB  
Article
Evaluation of Soil Quality and Balancing of Nitrogen Application Effects in Summer Direct-Seeded Cotton Fields Based on Minimum Dataset
by Yukun Qin, Weina Feng, Cangsong Zheng, Junying Chen, Yuping Wang, Lijuan Zhang and Taili Nie
Agronomy 2025, 15(8), 1763; https://doi.org/10.3390/agronomy15081763 - 23 Jul 2025
Viewed by 229
Abstract
There is a lack of systematic research on the comprehensive regulatory effects of urea and organic fertilizer application on soil quality and cotton yield in summer direct-seeded cotton fields in the Yangtze River Basin. Additionally, there is a redundancy of indicators in the [...] Read more.
There is a lack of systematic research on the comprehensive regulatory effects of urea and organic fertilizer application on soil quality and cotton yield in summer direct-seeded cotton fields in the Yangtze River Basin. Additionally, there is a redundancy of indicators in the cotton field soil quality evaluation system and a lack of reports on constructing a minimum dataset to evaluate the soil quality status of cotton fields. We aim to accurately and efficiently evaluate soil quality in cotton fields and screen nitrogen application measures that synergistically improve soil quality, cotton yield, and nitrogen fertilizer utilization efficiency. Taking the summer live broadcast cotton field in Jiangxi Province as the research object, four treatments, including CK without nitrogen application, CF with conventional nitrogen application, N1 with nitrogen reduction, and N2 with nitrogen reduction and organic fertilizer application, were set up for three consecutive years from 2022 to 2024. A total of 15 physical, chemical, and biological indicators of the 0–20 cm plow layer soil were measured in each treatment. A minimum dataset model was constructed to evaluate and verify the soil quality status of different nitrogen application treatments and to explore the physiological mechanisms of nitrogen application on yield performance and stability from the perspectives of cotton source–sink relationship, nitrogen use efficiency, and soil quality. The minimum dataset for soil quality evaluation in cotton fields consisted of five indicators: soil bulk density, moisture content, total nitrogen, organic carbon, and carbon-to-nitrogen ratio, with a simplification rate of 66.67% for the evaluation indicators. The soil quality index calculated based on the minimum dataset (MDS) was significantly positively correlated with the soil quality index of the total dataset (TDS) (R2 = 0.904, p < 0.05). The model validation parameters RMSE was 0.0733, nRMSE was 13.8561%, and the d value was 0.9529, all indicating that the model simulation effect had reached a good level or above. The order of soil quality index based on MDS and TDS for CK, CF, N1, and N2 treatments was CK < N1 < CF < N2. The soil quality index of N2 treatment under MDS significantly increased by 16.70% and 26.16% compared to CF and N1 treatments, respectively. Compared with CF treatment, N2 treatment significantly increased nitrogen fertilizer partial productivity by 27.97%, 31.06%, and 21.77%, respectively, over a three-year period while maintaining the same biomass, yield level, yield stability, and yield sustainability. Meanwhile, N1 treatment had the risk of significantly reducing both boll density and seed cotton yield. Compared with N1 treatment, N2 treatment could significantly increase the biomass of reproductive organs during the flower and boll stage by 23.62~24.75% and the boll opening stage by 12.39~15.44%, respectively, laying a material foundation for the improvement in yield and yield stability. Under CF treatment, the cotton field soil showed a high degree of soil physical property barriers, while the N2 treatment reduced soil barriers in indicators such as bulk density, soil organic carbon content, and soil carbon-to-nitrogen ratio by 0.04, 0.04, 0.08, and 0.02, respectively, compared to CF treatment. In summary, the minimum dataset (MDS) retained only 33.3% of the original indicators while maintaining high accuracy, demonstrating the model’s efficiency. After reducing nitrogen by 20%, applying 10% total nitrogen organic fertilizer could substantially improve cotton biomass, cotton yield performance, yield stability, and nitrogen partial productivity while maintaining soil quality levels. This study also assessed yield stability and sustainability, not just productivity alone. The comprehensive nitrogen fertilizer management (reducing N + organic fertilizer) under the experimental conditions has high practical applicability in the intensive agricultural system in southern China. Full article
(This article belongs to the Special Issue Innovations in Green and Efficient Cotton Cultivation)
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25 pages, 1882 KiB  
Article
An Assessment of Collector-Drainage Water and Groundwater—An Application of CCME WQI Model
by Nilufar Rajabova, Vafabay Sherimbetov, Rehan Sadiq and Alaa Farouk Aboukila
Water 2025, 17(15), 2191; https://doi.org/10.3390/w17152191 - 23 Jul 2025
Viewed by 519
Abstract
According to Victor Ernest Shelford’s ‘Law of Tolerance,’ organisms within ecosystems thrive optimally when environmental conditions are favorable. Applying this principle to ecosystems and agro-ecosystems facing water scarcity or environmental challenges can significantly enhance their productivity. In these ecosystems, phytocenosis adjusts its conditions [...] Read more.
According to Victor Ernest Shelford’s ‘Law of Tolerance,’ organisms within ecosystems thrive optimally when environmental conditions are favorable. Applying this principle to ecosystems and agro-ecosystems facing water scarcity or environmental challenges can significantly enhance their productivity. In these ecosystems, phytocenosis adjusts its conditions by utilizing water with varying salinity levels. Moreover, establishing optimal drinking water conditions for human populations within an ecosystem can help mitigate future negative succession processes. The purpose of this study is to evaluate the quality of two distinct water sources in the Amudarya district of the Republic of Karakalpakstan, Uzbekistan: collector-drainage water and groundwater at depths of 10 to 25 m. This research is highly relevant in the context of climate change, as improper management of water salinity, particularly in collector-drainage water, may exacerbate soil salinization and degrade drinking water quality. The primary methodology of this study is as follows: The Food and Agriculture Organization of the United Nations (FAO) standard for collector-drainage water is applied, and the water quality index is assessed using the CCME WQI model. The Canadian Council of Ministers of the Environment (CCME) model is adapted to assess groundwater quality using Uzbekistan’s national drinking water quality standards. The results of two years of collected data, i.e., 2021 and 2023, show that the water quality index of collector-drainage water indicates that it has limited potential for use as secondary water for the irrigation of sensitive crops and has been classified as ‘Poor’. As a result, salinity increased by 8.33% by 2023. In contrast, groundwater quality was rated as ‘Fair’ in 2021, showing a slight deterioration by 2023. Moreover, a comparative analysis of CCME WQI values for collector-drainage and groundwater in the region, in conjunction with findings from Ethiopia, India, Iraq, and Turkey, indicates a consistent decline in water quality, primarily due to agriculture and various other anthropogenic pollution sources, underscoring the critical need for sustainable water resource management. This study highlights the need to use organic fertilizers in agriculture to protect drinking water quality, improve crop yields, and promote soil health, while reducing reliance on chemical inputs. Furthermore, adopting WQI models under changing climatic conditions can improve agricultural productivity, enhance groundwater quality, and provide better environmental monitoring systems. Full article
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13 pages, 1293 KiB  
Article
Organic Amendments Enhance Maize Growth by Improving Chemical and Microbial Properties in Coastal Saline–Alkali Soils
by Xiaoyu Huang, Tao Yin, Weijiao Sun, Guili Ge and Wenliang Wei
Plants 2025, 14(14), 2217; https://doi.org/10.3390/plants14142217 - 17 Jul 2025
Viewed by 386
Abstract
Biochar and seaweed fertilizers could improve soil quality and promote plant growth. However, the key soil factors and microbial mechanisms that drive maize growth in coastal saline–alkali soils remain unclear. A soil culture experiment was designed with four treatments—no organic fertilizer (CK), single [...] Read more.
Biochar and seaweed fertilizers could improve soil quality and promote plant growth. However, the key soil factors and microbial mechanisms that drive maize growth in coastal saline–alkali soils remain unclear. A soil culture experiment was designed with four treatments—no organic fertilizer (CK), single seaweed fertilizer (F), single biochar (B), and combined application of seaweed fertilizer and biochar (BF)—to investigate the effects of biochar and seaweed fertilizer on maize growth and its mechanism. The results showed that B and BF significantly increased maize aboveground biomass by 8.86% and 17.28% compared to CK, respectively. The soil organic carbon, total nitrogen, available nitrogen, available phosphorus, available potassium content, and pH of B and BF were significantly increased. Bacterial diversity increased under B and BF, while fungal richness decreased under BF. The changes in the fungal community were mainly affected by soil available nitrogen, but there was no significant correlation between bacterial communities and these indicators. Pearson correlation analysis suggested that the bacterial Chao1 index was significantly positively correlated with maize growth indicators, soil available phosphorus, and available potassium, as well as the bacterial PD whole tree index with leaf area and available phosphorus. The fungal Shannon index was significantly negatively correlated with maize plant height, leaf area, SPAD, aboveground biomass, and soil total nitrogen and available nutrients. Overall, biochar and seaweed fertilization could significantly promote maize growth by improving soil chemical properties and microbial communities in coastal saline–alkali soils. Full article
(This article belongs to the Section Plant–Soil Interactions)
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14 pages, 793 KiB  
Article
Chemical and Biochemical Properties of Common Nettle (Urtica dioica L.) Depending on Various Nitrogen Fertilization Doses in Crop Production
by Joanna Lemanowicz and Agata Bartkowiak
Sustainability 2025, 17(14), 6394; https://doi.org/10.3390/su17146394 - 12 Jul 2025
Viewed by 389
Abstract
Fertilization in sustainable agriculture aims to provide optimal nutrients to plants while minimizing negative impacts on the environment and human health. This study aimed to determine the effect of various nitrogen fertilizer doses of 0, 50, 200, and 300 kgN ha−1 on [...] Read more.
Fertilization in sustainable agriculture aims to provide optimal nutrients to plants while minimizing negative impacts on the environment and human health. This study aimed to determine the effect of various nitrogen fertilizer doses of 0, 50, 200, and 300 kgN ha−1 on the chemical and biochemical composition of the leaves of nettle (Urtica dioica L.). Nettle leaves were harvested in late April to early May, before flowering. The contents of Zn, Cu, Mn, and Fe, as well as chlorophylls a and b, carotenoids, ascorbic acid, antioxidant, and catalase activity were determined. The result of catalase activity in nettle leaves was used to calculate the resistance index and the actual value of this enzyme activity, which was given as percentage change. Based on the analysis, nitrogen fertilization was found to have a statistically significant effect on the formation of the tested chemical and biochemical parameters in nettle leaves. The highest dose of nitrogen caused a statistically significant increase in the content of Zn, Mn, and assimilation pigments. The content of ascorbic acid ranged from 8.7 to 115 mg 100 g−1 f.m. and, in contrast to the antioxidant and catalase activity, decreased with increasing nitrogen dose. The relative change index (RCh) showed the following effect of nitrogen dose on catalase activity: N300 > N200 > N50. The low value of the plant resistance index (RP) for the nitrogen dose of 300 kg N ha−1 indicates that this dose had the greatest effect (lowest resistance) on catalase activity. Thus, the impact of the stress factor (nitrogen fertilization) was greatest at the highest dose. No statistically significant differences in catalase activity were found between N0 and N50. It was also demonstrated that the contents of Zn and Mn had a statistically significant and positive correlation with chlorophyll a and chlorophyll b. Full article
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19 pages, 2401 KiB  
Article
Variety-Dependent Yield and Physiological Responses to Combined Inorganic and Organic Sources of Nitrogen in Wheat
by Eva Herlinawati, Xiaoxiao Lei, Maoling Yang, Changlu Hu, Xueyun Yang and Shulan Zhang
Agronomy 2025, 15(7), 1679; https://doi.org/10.3390/agronomy15071679 - 10 Jul 2025
Viewed by 294
Abstract
Integrated application of chemical fertilizers with organic manure might improve crop yields and N-use efficiency (NUE, grain yield per unit N uptake), but the underlying physiological mechanisms are unclear. In this study, we aimed to examine the effects of combined inorganic and organic [...] Read more.
Integrated application of chemical fertilizers with organic manure might improve crop yields and N-use efficiency (NUE, grain yield per unit N uptake), but the underlying physiological mechanisms are unclear. In this study, we aimed to examine the effects of combined inorganic and organic fertilizers on wheat biomass allocation, root growth, water-soluble carbohydrates (WSCs) translocation, leaf senescence, N uptake, and their relationship with yield and NUE. We established a 2-year factorial field experiment with five nutrient treatments with ratios of inorganic: organic fertilizers from 0 to 1, and three varieties—two new: Weilong169 and Zhongmai578; and one reference: Xiaoyan22. The yield ranged from 3469 to 8095 kg ha−1, and it generally declined in response to a higher proportion of organic fertilizer. The NUE increased when there was a higher proportion of organic fertilizer. Weilong169 exhibited higher NUE than Zhongmai578, and both new cultivars outperformed the reference variety in the N harvest index. The yield correlated with leaf senescence traits and harvest index, and NUE was associated with WSC translocation and N uptake. The combination of fertilizers with a low portion of organic maintained yield and improved NUE; Weilong169 had the highest yield, NUE, and N harvest index. A low portion of organic manure substitution for chemical fertilizer suited all varieties. A new variety with a higher yield, N harvest index, and NUE highlights the importance of N traits in breeding programs. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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25 pages, 5480 KiB  
Article
Functional Trait Responses of Brasenia schreberi to Water and Soil Conditions Reveal Its Endangered Status
by Jingyu Yao, Zhenya Liu, Junbao Yu, Yun Zhang, Rui Xu, Jiahua Li, Yang Xu and Mei Sun
Plants 2025, 14(13), 2072; https://doi.org/10.3390/plants14132072 - 7 Jul 2025
Viewed by 374
Abstract
[Background] Brasenia schreberi is a perennial floating leaf aquatic plant with high ecological protection value and potential for economic development, and thus, its endangered mechanisms are of great concern. The rapid endangerment of this species in modern times may be primarily attributed to [...] Read more.
[Background] Brasenia schreberi is a perennial floating leaf aquatic plant with high ecological protection value and potential for economic development, and thus, its endangered mechanisms are of great concern. The rapid endangerment of this species in modern times may be primarily attributed to the deterioration of water and soil environmental conditions, as its growth relies on high-quality water and soil. [Objective] Exploring the responses of B. schreberi to water and soil conditions from the perspective of functional traits is of great significance for understanding its endangered mechanisms and implementing effective conservation strategies. [Methods] This study was conducted in the Tengchong Beihai Wetland, which has the largest natural habitat of B. schreberi in China. By measuring the key functional traits of B. schreberi and detecting the water and soil parameters at the collecting sites, the responses of these functional traits to the water and soil conditions have been investigated. [Results] (1) The growth status of B. schreberi affects the expression of its functional traits. Compared with sporadic distribution, B. schreberi in continuous patches have significantly higher stomatal conductance, intercellular CO2 concentration, transpiration rate, and vein density, while these plants have significantly smaller leaf area and perimeter. (2) Good water quality directly promotes photosynthetic, morphological, and structural traits. However, high soil carbon, nitrogen, and phosphorus contents can inhibit the photosynthetic rate. The net photosynthetic rate is significantly positively correlated with dissolved oxygen content, pH value, ammonia nitrogen, and nitrate nitrogen contents in the water, as well as the magnesium, zinc, and silicon contents in the soil. In contrast, the net photosynthetic rate is significantly negatively correlated with the total phosphorus content in water and the total carbon, total nitrogen, and total phosphorus content in the soil. (3) Leaf area and perimeter show positive correlations with various water parameters, including the depth, temperature, pH value, dissolved oxygen content, ammonium nitrogen, and nitrate nitrogen content, yet they are negatively correlated with total phosphorus content, chemical oxygen demand, biological oxygen demand, and permanganate index of water. [Conclusions] This study supports the idea that B. schreberi thrives in oligotrophic water environments, while the notion that fertile soil is required for its growth still needs to be investigated more thoroughly. Full article
(This article belongs to the Special Issue Aquatic Plants and Wetland)
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23 pages, 3046 KiB  
Article
Synergistic Interaction Between Endophytic Bacillus pumilus and Indigenous Arbuscular Mycorrhizal Fungi Complex Improves Photosynthetic Activity, Growth, and Yield of Pisum sativum
by Mounia Akhallaa Youne, Oumnia Akhallaa Youne, Mohammed Bouskout, Yaseen Khan, Hamza Khassali, Sulaiman Shah, Ahmed Sujat, Hassan Alahoui, Mohamed Najib Alfeddy, Bacem Mnasri and Lahcen Ouahmane
Plants 2025, 14(13), 1991; https://doi.org/10.3390/plants14131991 - 30 Jun 2025
Viewed by 479
Abstract
The demand for sustainable agriculture has prompted the exploration of alternative methods to boost crop growth and yield. Microbial biostimulants offer effective solutions to enhance plant performance and reduce reliance on chemical fertilizers. This study investigated the effects of Bacillus pumelo (B. [...] Read more.
The demand for sustainable agriculture has prompted the exploration of alternative methods to boost crop growth and yield. Microbial biostimulants offer effective solutions to enhance plant performance and reduce reliance on chemical fertilizers. This study investigated the effects of Bacillus pumelo (B. pumilus), applied individually and in combination with a mycorrhizal fungi complex, on the growth, yield, and photosynthetic activity of pea (Pisum sativum). Pea seeds were grown in sterilized soil under four treatment conditions, including a non-inoculated control, inoculation with 2.5 mL of B. pumilus culture per seedling, inoculation with an indigenous mycorrhizal fungal complex, and a combined treatment of B. pumilus and the mycorrhizal complex. The biostimulant treatments significantly influenced all measured photosynthetic and growth parameters. The results showed that B. pumilus substantially promoted pea growth, leading to notable improvements in biomass, plant height, and photosynthetic efficiency. When combined with the mycorrhizal fungi complex, these growth-promoting effects were significantly amplified, resulting in a ~69.7% increase in shoot fresh weight, a ~72.7% rise in root dry weight, and a ~73.6% boost in flower production. Additionally, the chlorophyll content increased by ~180% and photosynthetic yield (Fv/Fm) improved by ~18.5%. The combined treatment also produced the highest SPAD index value, reflecting a ~57% increase. The synergistic interaction between B. pumilus and mycorrhizal fungi enhances photosynthetic efficiency and overall plant performance. The study highlights the potential of using these microbial inoculants as biostimulants to improve pea cultivation in agroecosystems, offering a sustainable alternative to chemical fertilizers. Full article
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23 pages, 5783 KiB  
Article
Achnatherum inebrians Bacterial Communities Associated with Epichloë gansuensis Endophyte Infection Under Low-Concentration Urea Treatment: Links to Plant Growth and Root Metabolite
by Yuanyuan Jin, Zhenjiang Chen, Kamran Malik and Chunjie Li
Microorganisms 2025, 13(7), 1493; https://doi.org/10.3390/microorganisms13071493 - 26 Jun 2025
Viewed by 345
Abstract
Despite chemical exchange often serving as the first step in plant–microbe interactions, the specialized chemical metabolites produced by grass–Epichloë endophyte symbiosis as mediators of host growth, nutrient acquisition, and modulators of the rhizosphere community under low-nitrogen conditions are areas lacking in knowledge. [...] Read more.
Despite chemical exchange often serving as the first step in plant–microbe interactions, the specialized chemical metabolites produced by grass–Epichloë endophyte symbiosis as mediators of host growth, nutrient acquisition, and modulators of the rhizosphere community under low-nitrogen conditions are areas lacking in knowledge. In this study, we investigated the plant growth-promoting effects of the Epichloë endophyte strain and identified the growth of the Epichloë strain under different types of nitrogen source treatments. In addition to the in vitro test, we evaluated growth performance for Epichloë endophyte–infected plants (E+) and Epichloë endophyte–free plants (E−) in a pot trial under 0.01 mol/L urea treatment. Seedlings from E+ and E− groups were collected to analyze the plant bacterial microbiome and root metabolites. The E. gansuensis endophyte strain was found not to produce indoleacetic acid (IAA), pectinase, or contain ferritin. The nitrogenase gene, essential for nitrogen fixation, was also absent. These results suggest that E. gansuensis endophyte strains themselves do not contain attributes to promote plant growth. Concerning N fertilization, it was observed an increase in the colony diameter of E. gansuensis strain was observed only in the NO3-N (NN) treatment, while inhibition was observed in the urea-N (UN) treatment. E. gansuensis endophyte symbiosis significantly increased tiller number and plant dry weight. Overall, our results suggest that the E+ plants had more root forks and greater average root diameter compared to E− plants under the UN treatment. In a pot experiment using UN, data from 16S rRNA amplicon sequencing revealed that E. gansuensis endophyte infection significantly altered the bacterial community composition in shoot and root, and significantly increased Shannon (p < 0.001) and Chao 1 (p < 0.01) indexes. The relative abundance of Acidobacteriota, Actinomycetota, Cyanobacteriota, Fibrobacterota, Myxococcota, and Patescibacteria in the shoot, and Cyanobacteriota, Pseudomonadota, and Verrucomicrobiota in the root were significantly increased by E. gansuensis endophyte infection. Similarly, E. gansuensis endophyte symbiosis shifted the metabolite composition of the host plants, with the E+ plants showing a higher number of metabolites than the E− plants. In addition, co-metabolism network analysis revealed that the positive relevance between exudates and microorganisms in the root of the E+ plants is higher than that of the E− plants. These findings provide valuable insights into the knowledge of the effects of the symbiotic relationship between host plants and Epichloë endophyte on interspecific interactions of plant microbiome, beneficial for harnessing endophytic symbiosis, promoting plant growth. Full article
(This article belongs to the Section Microbiomes)
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18 pages, 1697 KiB  
Article
Synergistic Effects of Organic and Chemical Fertilizers on Microbial-Mediated Carbon Stabilization: Insights from Metagenomics and Spectroscopy
by Wei Wang, Yue Jiang, Shanshan Cai, Yumei Li, Juanjuan Qu and Lei Sun
Agronomy 2025, 15(7), 1555; https://doi.org/10.3390/agronomy15071555 - 26 Jun 2025
Viewed by 416
Abstract
Fertilization management constitutes a critical determinant of agroecosystem productivity. Reasonable fertilization can increase the organic matter content in soil; however, the potential mechanism of how different fertilization regimes impact soil carbon sequestration is unclear. We hypothesized that the combined application of biochar and [...] Read more.
Fertilization management constitutes a critical determinant of agroecosystem productivity. Reasonable fertilization can increase the organic matter content in soil; however, the potential mechanism of how different fertilization regimes impact soil carbon sequestration is unclear. We hypothesized that the combined application of biochar and organic fertilizer would enhance soil carbon sequestration by improving soil physicochemical conditions, increasing microbial activity, and promoting the accumulation of stable forms of carbon. This study systematically investigated different regimes, including the application of chemical fertilizer alone (SCN), chemical fertilizer with biochar (SCB), chemical fertilizer with organic fertilizer (SCO), and chemical fertilizer with both biochar and organic fertilizer (SCBO), on soil physiochemical properties, enzyme activities, labile organic carbon fractions, microbial carbon fixation gene expression, and community composition. The results demonstrated that (1) the application of organic materials significantly enhanced soil nutrient levels and enzyme activities, with the best performance from SCBO; (2) the organic materials increased the labile soil organic carbon (SOC) content and the carbon pool management index, with SCO showing the highest at 69.82%; (3) SCB and SCBO improved the stability of soil carbon components by increasing the proportion of Aromatic C; and (4) the carbon fixation genes ACAT and sdhA exhibited the highest abundance in SCBO. In parallel, the relative abundance of Actinomycetota increased with the application of organic materials, reaching its peak in SCBO. Mantel testing revealed a strong correlation between microbial community composition and SOC, emphasizing the importance of SOC in microbial growth and metabolism. Moreover, the strong correlation between carbon fixation genes and aromatic carbon suggested that specific carbon forms, particularly aromatic structures, played a critical role in driving microbial carbon fixation processes. Full article
(This article belongs to the Special Issue Microbial Carbon and Its Role in Soil Carbon Sequestration)
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13 pages, 855 KiB  
Article
Putative Second-Site Mutations in the Barley Low Phytic Acid 1-1 (lpa 1-1) Genetic Background Further Reduce Seed Total Phosphorus
by Beverly L. Agesa, Victor Raboy, Paul J. A. Withers and Katherine A. Steele
Agronomy 2025, 15(7), 1550; https://doi.org/10.3390/agronomy15071550 - 25 Jun 2025
Viewed by 326
Abstract
Inefficient crop phosphorus (P) use impacts global food security and P fertilizer use can be environmentally harmful. Lines homozygous for barley (Hordeum vulgare L.) low phytic acid 1-1 (lpa 1-1) have yields equivalent to the wild type but ~15% less [...] Read more.
Inefficient crop phosphorus (P) use impacts global food security and P fertilizer use can be environmentally harmful. Lines homozygous for barley (Hordeum vulgare L.) low phytic acid 1-1 (lpa 1-1) have yields equivalent to the wild type but ~15% less seed Total P (TP). The objective here was to identify second-site mutations in the lpa1-1 background that condition a further reduction in seed TP, again with little impact on yield. A chemically mutagenized population was derived from lpa 1-1 and screened to identify lines with seed TP reductions greater than 15% (as compared with wild-type) but with seed weights per plant within 80% of wild-type. Three M4 lines were selected and evaluated in a greenhouse pot experiment. Plants were grown to maturity either on a soil with low soil P fertility (16 to 25 mg Olsen P L−1; Soil P Index 1) or with that soil supplemented (36 kg P ha−1) to provide optimal available soil P. Mean seed P reduction across the three lines and two soil P levels was 28%, a near doubling of the lpa1-1 seed Total P reduction. When grown with optimal soil available P, no impact of these putative mutations on grain yield was observed. These findings suggest that the three lpa 1-1-derived mutant lines carry second-site mutations conferring substantially (~17%) greater decreases in seed TP than that conferred by lpa 1-1. If the putative mutations are confirmed to be heritable and to have negligible impact on yield, they could be used in breeding P-efficient barley cultivars as a step towards reducing regional and global P demand. Full article
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20 pages, 4784 KiB  
Article
Short-Term Application of Alfalfa Green Manure Increases Maize Yield and Soil Fertility While Altering Microbial Communities in Karst Yellow Clay Soil
by Xiaoye Gao, Shimei Yang, Yan He, Qiumei Zhao and Tao Zhang
Microorganisms 2025, 13(7), 1445; https://doi.org/10.3390/microorganisms13071445 - 21 Jun 2025
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Abstract
Green manure effectively improves soil nutrients and crop yields, yet its partial substitution for chemical nitrogen fertilizer (CF) in maize systems remains underexplored in ecologically fragile Karst landscapes. To assess the effect of alfalfa green manure on maize yield, soil nutrients, enzymes, and [...] Read more.
Green manure effectively improves soil nutrients and crop yields, yet its partial substitution for chemical nitrogen fertilizer (CF) in maize systems remains underexplored in ecologically fragile Karst landscapes. To assess the effect of alfalfa green manure on maize yield, soil nutrients, enzymes, and microorganisms, we conducted a two-year field experiment comprising eight treatments: four CF levels (100%, 80%, 60%, and 0% of recommended CF) applied alone or combined with alfalfa green manure (CF100, AL_CF100, CF80, AL_CF80, CF60, AL_CF60, CF0, AL_CF0). The results showed that maize grain yield decreased with the sole reduction of chemical N fertilizer. Compared to the CF100 treatment, the AL_CF100 and AL_CF80 treatments significantly increased grain yield by an average of 21.8% and 16.9%, respectively. Additionally, the AL_CF60 treatment maintained maize grain yield in 2020 and significantly increased it in 2021. The AL_CF100 treatment significantly enhanced soil available N (AN) content, while soil Olsen-P (SOP) content and soil quality index (SQI) were significantly improved in the AL_CF100, AL_CF80, and AL_CF60 treatments. Alfalfa green manure application had no significant effect on soil bacterial and fungal communities. However, the CF rates positively influenced the relative abundances of bacterial phyla (Bacteroidota, Myxococcota, and Patescibacteria) and genera (Intrasporangium, Streptomyces, and Quadrisphaera), as well as fungal genera (Exophiala and Setophoma). α-Diversity analysis revealed that partial substitution of CF with alfalfa green manure did not significantly affect soil bacterial diversity (Ace, Shannon, and Sobs indices) or richness (Chao value). In contrast, chemical N fertilizer rates significantly altered the β-diversity of both bacteria and fungi. The soil AN, AK, sucrase activity, and the relative abundances of Bacteroidota, Streptomyces, and Instrasporangium showed significant positive relationship with maize grain yield. This study demonstrates that substituting 20% CF with alfalfa green manure optimizes maize productivity while enhancing soil health in Karst agroecosystems. Full article
(This article belongs to the Section Plant Microbe Interactions)
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25 pages, 24039 KiB  
Article
Response of Endophytic Microbial Communities and Quality of Salvia miltiorrhiza to Fertilization Treatments
by Wenjing Chen, Wanyun Li, Yangyang Pan, Xin Zheng, Xinxin Fu, Menghui Wang, Wenyi Shi, Zhenzhou Wang, Xueli He, Chao He and Xianen Li
Microorganisms 2025, 13(6), 1429; https://doi.org/10.3390/microorganisms13061429 - 19 Jun 2025
Viewed by 486
Abstract
Salvia miltiorrhiza is a traditional herbal remedy for cardiovascular diseases and is in high demand in the market. Excessive chemical fertilizer application, resulting from unscientific fertilization practices, reduced the tanshinone content in S. miltiorrhiza roots. This study investigated how different fertilization types alter [...] Read more.
Salvia miltiorrhiza is a traditional herbal remedy for cardiovascular diseases and is in high demand in the market. Excessive chemical fertilizer application, resulting from unscientific fertilization practices, reduced the tanshinone content in S. miltiorrhiza roots. This study investigated how different fertilization types alter the endophytic microbial community composition of S. miltiorrhiza through field experiments, aiming to understand how fertilization affects its medicinal quality. The results showed that root fertilizers (F1) significantly increased root biomass and tanshinone I content, whereas foliar fertilizers (F2) increased tanshinone IIA content. High-throughput sequencing further revealed that F2 treatment significantly decreased the Shannon index of endophytic bacteria while significantly increasing the Shannon index of endophytic fungi. Co-occurrence network analysis revealed that fertilization significantly altered fungal community complexity and modularity, with F1 increasing network nodes and edges. Variance partitioning analysis indicated fungal diversity more strongly influenced medicinal compound levels under F2 and a combination of both (F3) than bacterial diversity. Septoria and Gibberella were positively correlated with tanshinone I and cryptotanshinone content under F2 treatment, respectively. Notably, the unique strains were isolated from different fertilization treatments for subsequent bacterial fertilizer development. These findings elucidate microbial responses to fertilization, guiding optimized cultivation for improved S. miltiorrhiza quality. Full article
(This article belongs to the Section Plant Microbe Interactions)
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