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Search Results (566)

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Keywords = atom-ion interactions

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11 pages, 4960 KB  
Article
Halogen as Template to Modulate the Structures of the Nanocage-Based Silver(I)-Thiolate Coordination Polymers
by Chunhong Tan, Li Tang, Jiajia Tan, Jinrong Zhang, Juan Zhou, Linmao Yin and Xiao-Feng Wang
Molecules 2026, 31(2), 331; https://doi.org/10.3390/molecules31020331 - 19 Jan 2026
Viewed by 159
Abstract
By the reaction of AgNO3, 2-methyl-2-propanethiol (HStBu), with various-sized halogen ions as templates, three multi-nuclear silver-thiolate cluster-based chain-like coordination polymers, [Ag6(μ-SBu)6]n (USC-CP-2), [Ag6(μ-StBu)5 [...] Read more.
By the reaction of AgNO3, 2-methyl-2-propanethiol (HStBu), with various-sized halogen ions as templates, three multi-nuclear silver-thiolate cluster-based chain-like coordination polymers, [Ag6(μ-SBu)6]n (USC-CP-2), [Ag6(μ-StBu)5Br]n (USC-CP-4) and [Ag14(μ-StBu)12I2]n (USC-CP-3) constructed by different Ag(I)-nanocages, have been synthesized and characterized by X-ray diffraction analyses. With F, Cl or without template, USC-CP-2 exhibits a one-dimensional structure composed of detached Ag6-cages, absent of fluoride or chloridion. While with Br and I, USC-CP-4 and USC-CP-3, two distinct halogen-templating multi-sliver cages-based chain-like polymeric structures have been observed, which are a mono-Br encapsulated Ag8-cage, or a dual-I embedded Ag16-cage, respectively. In these three compounds, the multi-Ag(I) cages were self-assembled by Ag-S bonds through bridged μ2-StBu ligands, and stabilized argentophilic interactions between neighboring silver atoms. This study demonstrates that the halide anions of varying sizes play a critical role in inducing the nucleation and structural evolution of the silver-thiolate clusters. Full article
(This article belongs to the Section Inorganic Chemistry)
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16 pages, 3068 KB  
Article
Modulating Reactivity and Stability of Graphene Quantum Dots with Boron Dopants for Mercury Ion Interaction: A DFT Perspective
by Joaquín Alejandro Hernández Fernández, Juan Jose Carrascal and Juan Sebastian Gómez Pérez
J. Compos. Sci. 2026, 10(1), 40; https://doi.org/10.3390/jcs10010040 - 12 Jan 2026
Viewed by 287
Abstract
The objective of this study was to use Density Functional Theory (DFT) calculations to examine how boron doping modulates the electronic properties of graphene quantum dots (GQDs) and their interaction with the Hg2+ ion. Boron doping decreases the HOMO-LUMO gap and increases [...] Read more.
The objective of this study was to use Density Functional Theory (DFT) calculations to examine how boron doping modulates the electronic properties of graphene quantum dots (GQDs) and their interaction with the Hg2+ ion. Boron doping decreases the HOMO-LUMO gap and increases the GQD’s electrophilic character, facilitating charge transfer to the metal ion. The adsorption energy results were negative, indicating electronic stabilization of the combined systems, without implying thermodynamic favorability, with the GQD@3B_Hg2+ system being the strongest at −349.52 kcal/mol. The analysis of global parameters (chemical descriptors) and the study of non-covalent interactions (NCIs) supported the affinity of Hg2+ for doped surfaces, showing that the presence of a single boron atom contributes to clear attractive interactions. In general, configurations doped with 1 or 2 boron atoms exhibit satisfactory performance, demonstrating that boron doping effectively modulates the reactivity and adsorption properties of GQD for efficient Hg2+ capture. Full article
(This article belongs to the Section Composites Modelling and Characterization)
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19 pages, 1582 KB  
Article
Sticking Efficiency of Microplastic Particles in Terrestrial Environments Determined with Atomic Force Microscopy
by Robert M. Wheeler and Steven K. Lower
Microplastics 2026, 5(1), 6; https://doi.org/10.3390/microplastics5010006 - 9 Jan 2026
Viewed by 230
Abstract
Subsurface deposition determines whether soils, aquifers, or ocean sediment represent a sink or temporary reservoir for microplastics. Deposition is generally studied by applying the Smoluchowski–Levich equation to determine a particle’s sticking efficiency, which relates the number of particles filtered by sediment to the [...] Read more.
Subsurface deposition determines whether soils, aquifers, or ocean sediment represent a sink or temporary reservoir for microplastics. Deposition is generally studied by applying the Smoluchowski–Levich equation to determine a particle’s sticking efficiency, which relates the number of particles filtered by sediment to the probability of attachment occurring from an interaction between particles and sediment. Sticking efficiency is typically measured using column experiments or estimated from theory using the Interaction Force Boundary Layer (IFBL) model. However, there is generally a large discrepancy (orders of magnitude) between the values predicted from IFBL theory and the experimental column measurements. One way to bridge this gap is to directly measure a microparticle’s interaction forces using Atomic Force Microscopy (AFM). Herein, an AFM method is presented to measure sticking efficiency for a model polystyrene microparticle (2 μm) on a model geomaterial surface (glass or quartz) in environmentally relevant, synthetic freshwaters of varying ionic strength (de-ionized water, soft water, hard water). These data, collected over nanometer length scales, are compared to sticking efficiencies determined through traditional approaches. Force measurement results show that AFM can detect extremely low sticking efficiencies, surpassing the sensitivity of column studies. These data also demonstrate that the 75th to 95th percentile, rather than the mean or median force values, provides a better approximation to values measured in model column experiments or field settings. This variability of the methods provides insight into the fundamental mechanics of microplastic deposition and suggests AFM is isolating the physicochemical interactions, while column experiments also include physical interactions like straining. Advantages of AFM over traditional column/field experiments include high throughput, small volumes, and speed of data collection. For example, at a ramp rate of 1 Hz, 60 sticking efficiency measurements could be made in only a minute. Compared to column or field experiments, the AFM requires much less liquid (μL volume) making it effortless to examine the impact of solution chemistry (temperature, pH, ionic strength, valency of dissolved ions, presence of organics, etc.). Potential limitations of this AFM approach are presented alongside possible solutions (e.g., baseline correction, numerical integration). If these challenges are successfully addressed, then AFM would provide a completely new approach to help elucidate which subsurface minerals represent a sink or temporary storage site for microparticles on their journey from terrestrial to oceanic environments. Full article
(This article belongs to the Special Issue Microplastics in Freshwater Ecosystems)
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13 pages, 878 KB  
Article
Binding of Tetrachloroaurate(III) to Bovine or Human γ-Globulins
by Daniil N. Yarullin, Olga I. Logacheva, Maksim N. Zavalishin and George A. Gamov
Int. J. Mol. Sci. 2026, 27(1), 541; https://doi.org/10.3390/ijms27010541 - 5 Jan 2026
Viewed by 289
Abstract
The interaction of metals with serum γ-globulins is of particular interest, as it can modulate immune system function and lead to unforeseen consequences following the intake of metal ions or their complexes, which are often considered (pro)drugs. This paper focuses on the interactions [...] Read more.
The interaction of metals with serum γ-globulins is of particular interest, as it can modulate immune system function and lead to unforeseen consequences following the intake of metal ions or their complexes, which are often considered (pro)drugs. This paper focuses on the interactions between gold(III) species and bovine or human serum γ-globulins in aqueous solutions. Using UV-Vis, fluorescence, and CD (circular dichroism) spectroscopy in diluted or 0.1 M NaCl aqueous solutions, we determined the most probable stoichiometry of the gold(III)-protein associates and their conditional binding constants. On average, 13 to 19 gold atoms bind per protein molecule, depending on the medium and protein origin, with apparent binding constants ranging from 3.6 to 4.6 (log K values; hydroxyl-containing complexes exhibit lower binding affinity). CD spectra revealed no changes in protein secondary structure induced by the increase in electrolyte concentration. However, the addition of gold(III) species resulted in a decrease in β-sheet content and a corresponding increase in turns or disordered fragments. Full article
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20 pages, 3421 KB  
Article
Design and Characterization of Ceramic Bricks with Industrial Waste and Silica–Carbon-Based Additives
by Aidar Kengesbekov, Alfira Sabitova, Moldir Bayandinova, Zhanna Sharipkhan, Diana Bexoltanova and Nurlan Mukhamediarov
Buildings 2026, 16(1), 20; https://doi.org/10.3390/buildings16010020 - 19 Dec 2025
Viewed by 410
Abstract
This study investigates ceramic bricks produced by partially replacing clay with Pb–Zn metallurgical residues (lead furnace dust and cyclone dust), fly ash, and carbonaceous additives. The novelty lies in the integrated multi-waste formulation and the combined FTIR–TGA–XRD analytical approach used to elucidate phase-formation [...] Read more.
This study investigates ceramic bricks produced by partially replacing clay with Pb–Zn metallurgical residues (lead furnace dust and cyclone dust), fly ash, and carbonaceous additives. The novelty lies in the integrated multi-waste formulation and the combined FTIR–TGA–XRD analytical approach used to elucidate phase-formation mechanisms. The results show that firing promotes the development of quartz, mullite, iron oxides, and an extensive Fe–Pb–Zn–Si–O amorphous network, while higher residue contents enhance amorphization and suppress mullite crystallization. These microstructural changes correlate with reduced compressive strength (1.6–3.1 MPa) and high water absorption (32–36%), although all samples completed 15 freeze–thaw cycles. Heavy-metal leaching assessed by atomic absorption spectroscopy (AAS) revealed very low Pb (0.08–0.20 mg/L) and Zn (0.25–0.45 mg/L) release, well below international safety limits, demonstrating effective immobilization of hazardous ions within the glassy matrix. Overall, the study provides new insight into multi-waste interactions during sintering and confirms that controlled residue incorporation enables environmentally safe, non-load-bearing ceramic materials with reduced clay consumption. Full article
(This article belongs to the Section Building Materials, and Repair & Renovation)
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18 pages, 639 KB  
Article
Synthesis, Characterization, Antimicrobial and Anticancer Evaluation of Novel Heterocyclic Diazene Compounds Derived from 8-Quinolinol
by Ion Burcă, Alexandra-Mihaela Diaconescu, Valentin Badea and Francisc Péter
Pharmaceuticals 2026, 19(1), 4; https://doi.org/10.3390/ph19010004 - 19 Dec 2025
Cited by 1 | Viewed by 453
Abstract
Background: 8-Quinolinol and its derivatives are drawing significant attention across various disciplines due to their remarkable versatility. These compounds are well-known for their exceptional chelating ability, forming stable metal complexes via their nitrogen and oxygen electron donor atoms. This main characteristic determines [...] Read more.
Background: 8-Quinolinol and its derivatives are drawing significant attention across various disciplines due to their remarkable versatility. These compounds are well-known for their exceptional chelating ability, forming stable metal complexes via their nitrogen and oxygen electron donor atoms. This main characteristic determines their broad utility. Biological activity can also be explained by the chelating capacity, which allows 8-quinolinol to bind to essential metal ions such as Fe, Zn, Cu, and others. This chelation disrupts metal-dependent biological processes in target cells or organisms, leading to a range of effects, including antimicrobial, anticancer, antifungal, and neuroprotective activities. On the other hand, the biological activity of pyrazole derivatives is attributed to their heterocyclic structure, which allows for interactions with biological targets that can lead to enzyme inhibition, receptor antagonism, radical scavenging, and other effects. Objective: This work aimed to synthesize and characterize novel diazene compounds derived from 8-quinolinol or 2-methyl-8-quinolinol and pyrazole amines, and to evaluate their antimicrobial and anticancer activities. Methods: The compounds have been synthesized by coupling diazonium salts obtained from the diazotization of heterocyclic amines with 8-quinolinol and its derivative, 2-methyl-8-quinolinol. The careful selection of reaction conditions enabled the synthesis of high-purity products. The compounds were characterized by 1D and 2D NMR, FT-IR spectroscopy, UV-Vis spectroscopy, and LC-HRMS analysis. The biological activity of the newly synthesized compounds was evaluated following the protocols of EU-OPENSCREEN, a European Research Infrastructure Consortium (ERIC) initiative dedicated to supporting early drug discovery. Results: By combining diazonium salts obtained from 3-methyl-1H-pyrazol-5-amine and ethyl 5-amino-3-methyl-1H-pyrazole-4-carboxylate with the aforementioned coupling agents, four novel 8-quinolinol derivatives were synthesized. The further hydrolysis of the ethoxy carbonyl functional group allowed its conversion to a carboxylic functional group, thus expanding the series of new compounds to six members. Several compounds from the series have proven to be biologically active against several human pathogenic microorganisms and the Hep-G2 cancer cell line. Conclusions: The combination of two well-known biologically active scaffolds through a classic diazo coupling reaction allowed the synthesis of novel biologically active compounds, which showed promising results as possible antifungal and anticancer agents. These results represent a foundation for future studies, which will include a broader biological screening and in vivo studies. Full article
(This article belongs to the Special Issue Advances in the Synthesis and Application of Heterocyclic Compounds)
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13 pages, 3460 KB  
Article
First-Principles Calculation Study on the Interfacial Stability Between Zr and F Co-Doped Li6PS5Cl and Lithium Metal Anode
by Junbo Zhang, Hailong Zhang, Binbin Chen, Yinlian Ji, Caixia Qian, Jue Wang, Yu Wang, Tiantian Bao, Peipei Chen and Jie Mei
Batteries 2025, 11(12), 456; https://doi.org/10.3390/batteries11120456 - 11 Dec 2025
Viewed by 629
Abstract
Li-Argyrodite-type Li6PS5Cl solid electrolyte is one of the most extensively investigated and promising materials in the field of all-solid-state batteries. However, its interfacial stability against lithium metal anodes remains challenging. Herein, first-principles calculations were employed to probe the effects [...] Read more.
Li-Argyrodite-type Li6PS5Cl solid electrolyte is one of the most extensively investigated and promising materials in the field of all-solid-state batteries. However, its interfacial stability against lithium metal anodes remains challenging. Herein, first-principles calculations were employed to probe the effects of Zr and F co-doping on the interfacial structural characteristics of Li6P0.9Zr0.1S4.9F0.1Cl solid electrolytes in contact with lithium metal at the atomic scale. Systematic investigations were conducted on interfacial structural stability, electronic structure, lithium-ion transport properties, and stress–strain properties. Theoretical results demonstrate that the formation energy of sulfur on the lithium metal side in the Zr and F co-doped interface is significantly increased, which stems from the strong bonding interactions of Zr–S and P-F bonds. This effectively suppresses sulfur diffusion toward the lithium metal anode, thereby enhancing the interfacial structural stability. Moreover, Zr and F co-doping simultaneously improves both the lithium-ion migration capability and mechanical stress–strain properties at the interface. The maximum strain at the Li/Li6PS5Cl interface increases substantially from 6% to 12% with the implementation of Zr/F co-doping. The Li+ migration barrier at the interface exhibits a reduction of 36%. The insights from this study can serve as a design guideline for engineering high-performance solid electrolytes for all-solid-state batteries. Full article
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26 pages, 6998 KB  
Article
Protolysis Reaction on Pyrophyllite Surface Molecular Models: A DFT Study
by María Bentabol, Carlos Pérez del Valle, Alfonso Hernández-Laguna and F. Javier Huertas
Molecules 2025, 30(23), 4530; https://doi.org/10.3390/molecules30234530 - 24 Nov 2025
Viewed by 498
Abstract
Understanding the mechanisms of mineral dissolution at the atomic scale is crucial for interpreting geochemical processes in soils and sediments, particularly those involving clay minerals. This study addresses the dissolution of pyrophyllite, a model dioctahedral phyllosilicate, under acidic conditions by employing Density Functional [...] Read more.
Understanding the mechanisms of mineral dissolution at the atomic scale is crucial for interpreting geochemical processes in soils and sediments, particularly those involving clay minerals. This study addresses the dissolution of pyrophyllite, a model dioctahedral phyllosilicate, under acidic conditions by employing Density Functional Theory (DFT) to simulate protolysis reactions at four distinct edge surfaces ({100}, {010}, {110}, and {130}). Molecular cluster models were constructed for each edge, and the interactions of protons and hydronium ions with various oxygen sites were systematically analyzed. The results demonstrate that bridge oxygens, especially those coordinated to one silicon and two aluminum atoms, are the most reactive sites, undergoing significant bond breaking and structural distortion upon protonation, while hydroxyl groups mainly accommodate structural changes without initiating dissolution. The {110} edge was found to be the least reactive, whereas the {100}, {010}, and {130} edges exhibited the highest reactivity. Hydronium ions produced similar or greater structural changes compared to protons, with water molecules forming hydrogen bonds with the resulting structures. These findings confirm that protonation of bridge oxygens is the rate-limiting step in phyllosilicate dissolution, and that octahedral cations are released preferentially over tetrahedral ones. These findings are consistent with the conclusions drawn from the dissolution experiments. This study provides atomistic information on the dissolution mechanisms of clay minerals at a scale that exceeds the capabilities of dissolution experiments, emphasizing the importance of edge reactivity relative to extensive basal surfaces and the role of water in proton transfer and facilitating protolysis reactions. Full article
(This article belongs to the Special Issue Advances in Density Functional Theory (DFT) Calculation)
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32 pages, 10026 KB  
Article
Molecular Dynamics Investigation of Mineral Surface Wettability in Oil–Water Systems: Implications for Hydrocarbon Reservoir Development
by Honggang Xin, Xuan Zuo, Liwen Zhu and Bao Jia
Minerals 2025, 15(11), 1194; https://doi.org/10.3390/min15111194 - 13 Nov 2025
Viewed by 682
Abstract
Wettability significantly influences fluid distribution and flow behavior in hydrocarbon reservoirs, yet traditional macroscopic measurements fail to capture the micro- and nanoscale interfacial interactions that govern these processes. This study addresses a critical knowledge gap by employing molecular dynamics simulations to systematically investigate [...] Read more.
Wettability significantly influences fluid distribution and flow behavior in hydrocarbon reservoirs, yet traditional macroscopic measurements fail to capture the micro- and nanoscale interfacial interactions that govern these processes. This study addresses a critical knowledge gap by employing molecular dynamics simulations to systematically investigate how salinity and mineral composition control wettability at the atomic scale—insights that are experimentally inaccessible yet essential for optimizing enhanced oil recovery strategies. We examined five typical reservoir minerals—kaolinite, montmorillonite, chlorite, quartz, and calcite—along with graphene as a model organic surface. Our findings reveal that while all minerals exhibit hydrophilicity (contact angles below 75°), increasing salinity weakens water wettability, with Ca2+ ions exerting the strongest effect due to their high charge density, which enhances electrostatic attraction with negatively charged mineral surfaces and promotes specific adsorption at the mineral–water interface, thereby displacing water molecules and reducing surface hydrophilicity. In oil–water–mineral systems, we discovered that graphene displays exceptional oleophilicity, with hydrocarbon interaction energies reaching −7043.61 kcal/mol for C18H38, whereas calcite and quartz maintain strong hydrophilicity. Temperature and pressure conditions modulate interfacial behavior distinctly: elevated pressure enhances molecular aggregation, while higher temperature promotes diffusion. Notably, mixed alkane simulations reveal that heavy hydrocarbons preferentially adsorb on mineral surfaces and form highly ordered structures on graphene, with diffusion rates inversely correlating with molecular size. These atomic-scale insights into wettability mechanisms provide fundamental understanding for designing salinity management and wettability alteration strategies in enhanced oil recovery operations. Full article
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19 pages, 4235 KB  
Article
First-Principles Study on Desolvation and Capacitive Performance of Bispyrrolidinium Cations in Pristine/Oxygen-Functionalized Bilayer Graphene Flat Pores
by Fudong Liu, Yi Cao, Sinan Li, Xin Qi and Bing Liu
Coatings 2025, 15(11), 1299; https://doi.org/10.3390/coatings15111299 - 6 Nov 2025
Viewed by 337
Abstract
Supercapacitors are limited by electrolyte cation desolvation, which directly impacts ion storage efficiency and capacitance. This study uses density functional tight-binding (DFTB+) first-principles calculations to investigate the desolvation of bispyrrolidinium cation complexes ([SBP(AN)]+, acetonitrile as solvent) in pristine (FP) and oxygen-functionalized [...] Read more.
Supercapacitors are limited by electrolyte cation desolvation, which directly impacts ion storage efficiency and capacitance. This study uses density functional tight-binding (DFTB+) first-principles calculations to investigate the desolvation of bispyrrolidinium cation complexes ([SBP(AN)]+, acetonitrile as solvent) in pristine (FP) and oxygen-functionalized (OFP: hydroxyl-HFP, carbonyl-CFP, aldehyde-AFP) bilayer graphene flat pores with AA/AB stacking. Critical desolvation diameters were determined: 5.0 Å (FP), 5.2 Å (HFP), 5.0 Å (AFP), and 4.6 Å (CFP). Hydroxyl functionalization expanded the critical diameter, reduced SBP+ intercalation energy, and increased relative capacitance by 1.02~1.03 times; carbonyl groups had the opposite effect, while aldehyde groups showed no significant impact. Density of States (DOS) analysis revealed enhanced conductivity for HFP and AFP after SBP+ embedding, but reduced conductivity for CFP. Charge density difference and Bader charge analysis confirmed electron transfer primarily between SBP+ (electron donor) and oxygen atoms in functional groups (electron acceptor), with SBP+ interacting mainly with functional groups rather than the carbon basal plane. This work provides theoretical guidance for optimizing graphene-based supercapacitor electrodes via pore structure and surface functionalization. Full article
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17 pages, 5562 KB  
Article
Obtaining Iron Chelates and Iron Oxide Nanoparticles via Multispark Discharge Treatment of EDTA Solutions in Argon Atmosphere
by Viktoriia V. Gudkova, Valentin D. Borzosekov, Maria A. Zimina, Igor V. Moryakov, Dmitry V. Malakhov, Namik Gusein-zade and Evgeny M. Konchekov
Plasma 2025, 8(4), 45; https://doi.org/10.3390/plasma8040045 - 3 Nov 2025
Viewed by 1261
Abstract
This study investigates the physicochemical processes in aqueous solutions treated with a high-current (up to 300 A) pulsed multispark discharge. Pulse length was 2 μs at a 50 Hz repetition rate. The discharge occurred within bubbles of argon injected between the stainless-steel electrodes [...] Read more.
This study investigates the physicochemical processes in aqueous solutions treated with a high-current (up to 300 A) pulsed multispark discharge. Pulse length was 2 μs at a 50 Hz repetition rate. The discharge occurred within bubbles of argon injected between the stainless-steel electrodes at the constant flow rate. The erosion of electrode material during the discharge led to iron and other alloy components entering the liquid. Optical emission spectra confirmed the erosion of electrode material (Fe, Cr, Ni atoms and ions). EDTA and its disodium salt were used in order to study their effect on the metal particle formation process. Treatment with deionized water led to an increase in conductivity and the generation of hydrogen peroxide (up to 1200 µM). In contrast, the presence of EDTA and its disodium salt drastically altered the reaction pathways: the H2O2 yield decreased, and the solution conductivity dropped substantially for the acidic form of EDTA, while the decrease was minor for EDTA-Na2. This effect is attributed to the buffered chelation of eroded metal ions, forming stable Fe-EDTA complexes, as confirmed by a characteristic absorption band at 260 nm. The results demonstrate the critical role of complex-forming agents in modulating plasma–liquid interactions, shifting the process from direct erosion products to the formation of stable coordination compounds. Full article
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15 pages, 2780 KB  
Article
Post-Synthesis Ion Beam Sputtering of Pt/CeO2–ZrO2 Catalysts: Correlating Surface Modifications with Light-Off Performance
by Ruairi O’Donnell, Marina Maddaloni, Salvatore Scaglione and Nancy Artioli
Catalysts 2025, 15(11), 1018; https://doi.org/10.3390/catal15111018 - 30 Oct 2025
Viewed by 596
Abstract
High-efficiency diesel and lean-burn engines produce lower exhaust temperatures, which can delay the activation of after-treatment catalysts such as Diesel Oxidation Catalysts (DOCs). This study explores ion beam sputtering as a post-synthesis strategy to enhance the low-temperature activity of commercial Pt/CeO2–ZrO [...] Read more.
High-efficiency diesel and lean-burn engines produce lower exhaust temperatures, which can delay the activation of after-treatment catalysts such as Diesel Oxidation Catalysts (DOCs). This study explores ion beam sputtering as a post-synthesis strategy to enhance the low-temperature activity of commercial Pt/CeO2–ZrO2 catalysts. Low-energy ions (0.5–1.5 keV) were applied with controlled variations in treatment number, beam current, and exposure time to selectively generate oxygen vacancies and improve Pt dispersion. Structural and chemical effects were characterized using X-ray diffraction (XRD), BET surface area measurements, X-ray photoelectron spectroscopy (XPS) and extended X-ray absorption fine structure (EXAFS). Catalytic performance was evaluated through CO and C3H6 oxidation under conditions mimicking lean-burn engine exhaust. Increasing the number of ion treatments progressively lowered light-off temperatures, correlating with enhanced Pt–Ce3+ interactions and improved surface reducibility. Variations in beam current and exposure time further modulated these surface effects, confirming the tunable nature of the approach. The results demonstrate that ion beam sputtering selectively modifies the catalyst surface without altering the bulk structure, directly linking atomic-scale modifications to improved low-temperature activity. This strategy offers a promising route to overcome delayed light-off issues in modern high-efficiency engines, providing a precise, controllable method to optimize emission control catalysts. Full article
(This article belongs to the Special Issue Design and Application of Combined Catalysis)
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24 pages, 10390 KB  
Article
Electronic Structure and Binding Characteristics of Ionic Liquid Ions on Li-Metal Surfaces Through a DFT Approach
by Luis A. Selis, Dinau Velazco-Lorenzo, Juan Quillas and Diego E. Galvez-Aranda
Crystals 2025, 15(11), 928; https://doi.org/10.3390/cryst15110928 - 28 Oct 2025
Cited by 1 | Viewed by 1106
Abstract
Understanding the interactions between ionic liquid ions and lithium-metal surfaces is critical for designing safer and more efficient lithium metal batteries. In this work, we use density functional theory to investigate the electronic structure, binding energies, work-function shifts and interfacial charge redistribution of [...] Read more.
Understanding the interactions between ionic liquid ions and lithium-metal surfaces is critical for designing safer and more efficient lithium metal batteries. In this work, we use density functional theory to investigate the electronic structure, binding energies, work-function shifts and interfacial charge redistribution of several ionic liquid ions, including FSI, TFSI, PF6, BF4, DFOB, Pyr14+, and EMIM+, on a Li-metal anode (Lim). Absorption orientation-dependent effects are examined for each molecule. Specifically, differences in charge density and electron localization function analyses revealed unique patterns of electron accumulation and delocalization that highlighted specific atomic roles in interfacial bonding. Interfacial charge transfer is analyzed through Bader charges, revealing a moderate charge redistribution for the cations (EMIM+, Pyr14+), and a more significant charge uptake for the reactive anions (FSI, TFSI, DFOB). Among cations, EMIM+ was determined to have the most interfacial stability, while Pyr14+ displayed mid-level reactivity. For the anions, varying tendencies for bond formation with lithium metal and potential fragmentation could be determined. Overall, these discoveries detail an atomistic analysis of ionic liquid to Lim interactions providing additional pathways for molecular design techniques to stabilize electrolytes performing not high-cost computational calculations. Full article
(This article belongs to the Special Issue Analysis of Halogen and Other σ-Hole Bonds in Crystals (2nd Edition))
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20 pages, 4378 KB  
Article
Structural and Magneto-Optical Study on the Tetrahedrally Configured [CoCl2(1-allylimidazole)2] and Molecular Docking to Hypoxia-Inducible Factor-1α
by Hela Ferjani, Bruno Poti e Silva, Faizul Azam, Yasmeen G. Abou El-Reash, Tarek Yousef, Nahal Rouzbeh, Leonhard Rochels, Sabrina Disch, Sascha A. Schäfer and Axel Klein
Inorganics 2025, 13(11), 344; https://doi.org/10.3390/inorganics13110344 - 23 Oct 2025
Viewed by 824
Abstract
The Co(II) complex [CoCl2(AImd)2] (AImd = 1-allylimidazole) was reinvestigated using a combination of experimental and theoretical methods. The previously reported crystal structure was redetermined and Hirshfeld surface analysis and enrichment ratios were added showing that intermolecular H⋯Cl and π⋯π [...] Read more.
The Co(II) complex [CoCl2(AImd)2] (AImd = 1-allylimidazole) was reinvestigated using a combination of experimental and theoretical methods. The previously reported crystal structure was redetermined and Hirshfeld surface analysis and enrichment ratios were added showing that intermolecular H⋯Cl and π⋯π interactions are the primary forces in the crystal structure, while H⋯H interactions dominate the surface of the molecule, making it rather hydrophobic in keeping with a low solubility in water. A Quantum Theory of Atoms in Molecules (QTAIM)/Non-Covalent Interactions (NCI)-Reduced Density Gradient (RDG) analysis on a dimeric model showed that the energies V(r) of the classical H⋯Cl hydrogen bonds range from −3.64 kcal/mol to −0.75 kcal/mol and were augmented by hydrophobic H⋯C interactions of >1 kcal/mol. T-dependent magnetization measurements reveal paramagnetic behavior with an effective magnetic moment of µeff = 4.66(2) µB. UV-vis absorption spectra in solution showed intense absorptions peaking at 240 nm, corresponding to intraligand π→π* transitions within the 1-allylimidazole moiety and a structured absorption around 600 nm, which is attributed to the spin-allowed d→d transitions of the high-spin Co(II) d7 ion in a distorted tetrahedral geometry. Both assignments were confirmed through TD-DFT calculations on the electronic transitions and agree with the DFT-calculated compositions of the frontier molecular orbitals. Molecular docking to hypoxia-inducible factor-1 alpha (HIF-1α) gave a docking score of −5.48 kcal/mol and showed hydrophobic⋯hydrophobic π-stacking interactions with the Ile233, Leu243, Val338, and Leu262 residues. A higher docking score of −6.11 kcal/mol and predominant hydrophobic⋯hydrophobic interactions with Trp296, His279, and Ile281 were found for HIF-1 inhibiting factor (FIH-1). Full article
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19 pages, 4754 KB  
Article
How Sodium and Calcium Ions Pass Through Batrachotoxin-Bound Sodium Channel
by Boris S. Zhorov
Toxins 2025, 17(10), 520; https://doi.org/10.3390/toxins17100520 - 21 Oct 2025
Viewed by 1116
Abstract
Steroidal sodium channel agonist batrachotoxin (BTX), one of the most potent animal toxins, dramatically increases calcium permeation and alters other channel characteristics. In a cryoEM structure of rat sodium channel Nav1.5 with two BTX-B molecules, one toxin binds between repeats III and IV [...] Read more.
Steroidal sodium channel agonist batrachotoxin (BTX), one of the most potent animal toxins, dramatically increases calcium permeation and alters other channel characteristics. In a cryoEM structure of rat sodium channel Nav1.5 with two BTX-B molecules, one toxin binds between repeats III and IV and exposes to the pore lumen two oxygen atoms and protonatable nitrogen. The mechanism of ion permeation and selectivity in BTX-bound channel is unclear. Here Monte Carlo energy-minimized profiles of sodium and calcium ions pulled through the pore were computed in models with various protonated states of the DEKA lysine and BTX-B. The only model where the ions readily passed by the DEKA lysine and BTX-B involved their deprotonated nitrogens. In this model, electronegative atoms of BTX-B attracted a permeant cation that stabilized the “dunked” lysine through electrostatic interactions and nearby water molecules. This would retard reprotonation of the lysine and its “uplifting” to the DEKA carboxylates, which otherwise attracts calcium. The results suggest how sodium and calcium ions pass through BTX-bound sodium channel and why BTX increases calcium permeation. The study supports an earlier hypothesis that during the sodium ion permeation cycle, the DEKA lysine alternates between uplifted and dunked conformations in the protonated and deprotonated states, respectively, while the sodium-displaced proton and the sodium ion nullify the net electrical charge at the DEKA region. Full article
(This article belongs to the Section Animal Venoms)
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