Editor’s Choice Articles

The concentration of phenolic compounds in rapeseed is important because they are either anti-nutritional compounds or directly related to antioxidant activity. In this study, single nucleotide polymorphisms (SNPs) were identified using genotyping-by-sequencing (GBS), and an association study was conducted to investigate phenolic content in 95 rapeseed mutant lines derived from gamma rays and their original cultivar. A total of 3,196,318 SNPs were detected, resulting in the identification of a set of 70,208 union SNPs used to perform association studies. Seven compounds were identified, sinapine being the major phenolic compound (91.2–99.2%) in all genotypes. An association study was conducted for seven compounds and total phenolic content (TPC). It identified 241 SNPs that were significantly associated with these compounds, total sinapine content (TSC), and TPC. Based on the SNP markers detected, BnaC02g20420D was associated with dihexose, BnaC08g30570D with progoitrin, BnaA01g06890D with methyl sinapate, BnaA09g16810D with sinapine(4-O-8′)guaiacyl, BnaCnng39930D with trans-sinapine 1, BnaA07g31720D with trans-sinapine 2, BnaC03g31950D with sinapoyl malate, and BnaAnng27700D with TPC. These were selected as candidate genes that may play a key role in rapeseed. The SNP markers associated with these key phenolic compounds can be used as targets in breeding programs to reduce anti-nutritional components. Full article

Mulching suppresses weeds, improves soil biology, and increases physical or bioactive fruit yield in fruit orchards. However, there is no information on its impact on calafate (Berberis microphylla G. Forst.) orchards, which produce berries with high antioxidant content. To address this gap, in 2021, an experiment was conducted to evaluate the effect of 5 years of mulching on soil, plants, and calafate fruit. Four mulching treatments were established: no mulch (control), geotextile, oat straw, and hazelnut shell. All mulches suppressed weeds (43%) and maintained more soil moisture (5%) than the control. Soil microbial activity increased only with hazelnut shell compared with the control, up to 46%. Only oat straw and hazelnut shell increased basal respiration and urease up to 31% and 15% more than the control. Oat straw produced the highest fruit yield with 0.44 t ha⁻¹, while the lowest yield was produced by the control and hazelnut shell with 0.1 and 0.15 t ha⁻¹, respectively. The geotextile with 0.35 t ha⁻¹ of fruit produced no differences between treatments. The ORAC antioxidant capacity was only higher in the control and hazelnut shell, with a mean of 3272 µmol TE 100 g⁻¹. Hazelnut shell mulch is recommended to improve the biological functions of the soil and the antioxidant capacity of the calafate fruit. Full article

Secondary metabolites derived from plants have demonstrated significant biological activity and hold both edible and medicinal significance. These compounds play a crucial role in the development of pharmaceuticals, particularly in the context of inflammatory disorders and chronic diseases associated with oxidative stress. The objective of this study was to investigate the chemical characterization, antioxidant potential, and antibacterial properties of the aqueous extract of Anacyclus pyrethrum (AEAP). To achieve this, we employed various analytical techniques including HPLC–ESI–MS/MS, Fourier transform infrared, X-ray diffraction, scanning electron microscopy, and energy-dispersive X-ray spectroscopy. The antioxidant activity of the AEAP was assessed using DPPH (2,2-Diphenyl-1-picrylhydrazyl) and reducing power assays, while antibacterial activity was evaluated against both Gram-negative (Escherichia coli and Pseudomonas aeruginosa) and Gram-positive bacteria (Staphylococcus aureus and Enterococcus faecium) using the broth microdilution assay. Our findings demonstrated significant antioxidant activity of the AEAP, as well as broad-spectrum antibacterial activity against both Gram-positive and Gram-negative bacteria. HPLC analysis identified important bioactive compounds, notably pellitorine and 3,4-dihydroxybenzoic acid, known for their antioxidant and antibacterial properties. Overall, the AEAP demonstrated potent antioxidant and antibacterial activities, suggesting its potential as a valuable natural source of bioactive compounds with various therapeutic applications. Full article

Aminopyralid (AP)-contaminated straw mulch is frequently used in strawberry production to maintain moisture and reduce weed growth. AP may be translocated by rain and irrigation. Contamination of plant tissues with AP during the production cycle at a strawberry farm was measured by HPLC MS/MS using a newly validated extraction method. Samples were removed from a commercial plantation using straw mulch. The highest AP levels (1.2–1.3 ng.g⁻¹) were found in strawberries; the levels in leaves and roots were two and four to ten times lower, respectively. The amounts detected in fruits were 10 times lower than the dietary tolerances given by the U.S. Environmental Protection Agency for wheat grain and cattle milk/meat. The effect of AP on flowering and fruiting was investigated in pot experiments closely mimicking farm conditions. The released AP negatively affected flowering and reduced the total fruit weight two times. The study showed a significant release of AP from mulch straw during commercial strawberry production and documented the risk of using herbicide-contaminated straw for mulching. Full article

Together with lime, lemon is recognized as the third most extensively cultivated citrus species worldwide, trailing only behind orange and mandarin. The enhancement in the economic value of lemons as a valuable resource in Southern Italy depends by the competitiveness of local lemon production in both domestic and international markets. This necessitates conducting a comprehensive study that thoroughly explores the available indigenous germplasm at the local and national levels. This study aims to identify the most promising Sicilian and Campanian cultivars that are well suited for both fresh fruit consumption and the production of processed goods. This re-study assumes even greater importance considering the ongoing climate changes, as environmental stresses significantly impact the ripening process and the timing of fruit development. Our study has highlighted a notable diversity among the 18 investigated lemon cultivars, particularly highlighting specific cultivars that possess desirable attributes for fresh consumption. The cultivars that showed the greatest cumulative production over the 10 years of the study were Erice with 467.89 kg/tree and Femminello Siracusano 2KR with 408.44 kg. Notably, cultivars like Segesta, Erice, and Kamarina have exhibited higher percentages of juice content ranging from 27.30% to 31.08%. These cultivars show great potential for abundant juice content and optimal acidity levels for direct consumption. On the other hand, cultivars characterized by enhanced yield, such as Femminello Siracusano 2KR, Femminello Fior d’Arancio m79, and Erice, may prove to be particularly well suited to produce processed goods. Overall, our findings provide valuable insights into some qualitative parameters of lemon cultivars, important either for fresh consumption or for transformed products. Full article

Tartaric acid (TA) is the primary organic acid present in grapes and a fundamental constituent of wine, responsible for shaping its taste, aroma, and overall quality. This review presents a comprehensive overview of the advances made in previous investigations on grape tartaric acid. It elucidates the structural properties, distribution characteristics, biosynthesis, catabolism, and transcriptional regulation of grape tartaric acid, and also speculates on the regulatory mechanism of tartaric acid based on the modulation of ascorbic acid-related transcription factors. Furthermore, this review provides insights into the future research directions and objectives, with the goal of providing a reference for the analysis of the complete biosynthetic pathway of grape tartaric acid, thereby enabling precise regulation of tartaric acid. Full article

Lack of water and salinity are common problems in many parts of the world. Therefore, some types of cacti can present as promising crops. Therefore, the ability of cactus species to survive and adapt under natural stress conditions should be evaluated. The experiment was aimed at evaluating the effect of salt stress on germination and emergence of pitaya seeds obtained from different species (Hyloceresu undatus (Haw.) Britton and Rose and Hylocereus polyrhizus (Lem.) Britton and Rose), priming with plant growth regulators, namely salicylic acid (SA), oxalic acid (OA) and mepiquat chloride (MC). The experiment had a completely randomized design with a 2 × 4 × 3 factorial scheme corresponding to two pitaya cultivars (white- and red-fleshed), four NaCl concentrations (0, 2500, 5000 and 10,000 ppm), and three PGRs (150 ppm/MC, SA, OC). According to the results, the maternal environment of the seed was important in salt stress resistance, while seeds matured in the environment with red fruit flesh were more tolerant to salt stress. Although Pitaya species are relatively salt-tolerant, growth (about 30%) was significantly reduced above 2500 ppm and germination (about 45%) above 5000 ppm. Germination percentage stood out as the most important trait determining seed quality and had positive effects on the germination stress tolerance index (r: 0.63), seedling length (r: 0.74) and fresh seedling weight (r: 0.56). This is the first study of how maternal environment affects germination and seedling quality under saline conditions in Hylocereus. The results obtained may contribute to pitaya cultivation and breeding. Full article

Citrus, the world’s most common fruit, boasts an abundance of resources and varieties and possesses a high commodity value. Arbuscular mycorrhizal fungi (AMF) and citrus roots can form a symbiotic relationship, promoting citrus growth, improving its disease resistance, and increasing the quality of the fruits. However, the literature lacks a detailed understanding of the symbiotic citrus–AMF relationship in cultivation. In this study, we reviewed the diversity (different citrus species and habitats), stress resistance (disease, drought, saline-alkali, temperature stresses), expression of defense genes, and underlying mechanisms of symbiotic AMF in citrus. Our aim was to provide a robust reference point and offer valuable insights to guide future studies on citrus symbiotic AMF and their applications in citrus planting. This review could help to facilitate AMF applications in citrus biological control (particularly in the citrus Huanglongbing) and sustainable development. Full article

This study explores the bioactive potential of young shoots from blackcurrant, European blueberry, and mountain cranberry, widely employed in gemmotherapy and phytotherapy, as rich sources of antioxidants, antimicrobial agents, and anti-inflammatory components. The primary aims of this study were to enhance the extraction conditions for bioactive compounds from blackcurrant young shoots using Modde software for experimental design, to conduct a comprehensive phytochemical analysis of blackcurrant, European blueberry, and mountain cranberry young shoot extracts through LC–MS analysis, and to evaluate the in vitro biological activities of these optimized extracts. The experimental design comprised multiple variables: extraction techniques, solvent type, extraction time, apparent pH, and the solvent-to-vegetal product ratio. The responses included total phenolic content, total flavonoid content, condensed tannin content, and total antioxidant activity determined through the DPPH assay. Furthermore, the antioxidant potential of the extracts was validated through in vitro cell culture experiments, in addition to the cytotoxicity assessments conducted on both normal and cancer cell lines. Extracts obtained through Ultra-Turrax extraction using 70% acetone displayed high levels of polyphenolic compounds and enhanced antioxidant potential, regardless of young shoots origin. LC–MS analysis revealed the predominant occurrence of chlorogenic acid, hyperoside, and isoquercitrin in all examined samples. The optimized extracts also displayed significant biological potential when evaluated in vitro on cell lines. These results provide valuable insights into the potent bioactive components present in these young shoot extracts, paving the way for further exploration in therapeutic applications. Full article

Cover cropping is a best management practice that can improve soil quality by reducing soil erosion, building soil organic matter (SOM), and improving soil nutrient availability. Southwest (SW) Florida citrus growers have the challenge of growing citrus in sandy soils characterized by low organic matter (<2%), extremely low water and nutrient-holding capacities, and high sand content (>90%), and therefore are looking for methods to improve SOM and nutrient retention and availability in sandy soils. A trial of two cover crop (CC) mixtures planted in the row middles (RM) of Huanglongbing-affected citrus ‘Valencia’ (Citrus sinensis (L.) Osbeck) orchards in sandy soils in SW Florida was conducted. This study explored how incorporating CCs in the RM of the orchards could affect soil ammonium (NH₄⁺), soil nitrate (NO₃⁻), exchangeable macronutrients, and SOM temporal availability. These parameters were measured under the tree canopy (UC) and within RM of two orchards: South Grove (SG) and North Grove (NG), both located in SW Florida. The two seeded CC mixtures were legume + non-legume (LG+NL) and non-legume (NL) and were compared to a control no-CC grower standard (GSC). Phosphorus, calcium, magnesium, and NH₄⁺ were not statistically significantly different among treatments in either of the two sampling positions (UC and RM). Cover cropping significantly (p < 0.05) increased NO₃⁻-N concentrations in the RM area of the citrus orchards after seven consecutive seasons (brassicas, legumes, and grasses) by 31% in the LG + NL and 29% in the NL with reference to the GSC. In addition to the significant increase in NO₃⁻N, SOM significantly (p < 0.05) increased in the RM in the NG site only in both CCs treatments by 17% and 16% for LG + NL and NL treatments, respectively, compared with GSC. Full article

Atractylodes chinensis has a high medicinal value and is widely cultivated. However, root rot disease seriously affects the yield and quality of A. chinensis. To develop green and safe pesticides, the inhibitory effect of essential oils (EOs) of three Labiatae plants on the pathogenic fungi that causes root rot disease in Atractylodes chinensis was investigated. The results showed that the Origanum vulgare EO and Thymus mongolicus EO exhibited strong inhibitory effects on Fusarium oxysporum, Fusarium solani, and Fusarium redolens, with 100% inhibition rate. The low MIC values of EOs and their main components against the three pathogenic fungi indicated that all of them showed strong fungicidal effects. The MIC values of O. vulgare EO against F. oxysporum, F. solani, and F. redolens were 2.60 mg/mL, 3.13 mg/mL, and 1.56 mg/mL, respectively. Analyses using scanning electron microscopy (SEM) and transmission electron microscopy (TEM) showed that the O. vulgare EO severely damaged the cell wall and cell membrane of mycelial cells. The O. vulgare EO increased cell permeability, leading to a large leakage of cell contents (DNA and proteins). In addition, O. vulgare EO inhibited F. oxysporum by inducing ROS production and reducing the amount of intracellular GSH, leading to a large accumulation of ROS. This study showed that plant EOs have excellent fungicidal activity and can be used as novel natural and environmentally friendly pesticides for the control of root rot in A. chinensis. Full article

The present study has been carried out to determine the effects of four different illuminators with red, far-red, blue, and white light-emitting diodes (LEDs) on the growth, morphology, pigment composition, and chlorophyll fluorescence of spinach (Spinacia oleracea L.) of the ‘Zhirnolistny’ cultivar. We investigated these variants in two photon flux densities, 400–800 nm (PFD) 120 µmol m⁻² s⁻¹ and 180 µmol m⁻² s⁻¹. The studies were carried out in a climate chamber. Plant measurements were carried out on the 30th and 45th days of cultivation. The results showed that during the period of active growth, on the 30th day, spinach plants accumulated 2.6 and 2.4 times more fresh weight in the variant with a higher PFD (180 µmol m⁻² s⁻¹). At the end of the growing season, only a decrease in PFD had an effect on the fresh and dry weight of plants. The highest concentration of chlorophyll on both the 30th and 45th days of vegetation was found when spinach plants were grown under red-blue (RB) LEDs in a spectrum proportion of R70:B30. It was found that the variants had a higher proportion of green radiation in the spectrum of illuminators with PFD 180 µmol m⁻² s⁻¹, and the nitrate content in spinach was slightly lower than in other variants. Full article

The fungus Colletotrichum orbiculare causes watermelon anthracnose and is an important pathogen of watermelon in the United States, causing a significant impact on yield and quality of the produce. The application of fungicides as preventative and post-occurrence control measures is currently being deployed by growers. Further study of the genetic and molecular basis of anthracnose resistance will help in guiding future watermelon breeding strategies. Several conserved virulence factors (effectors) in C. orbiculare have been reported to interact with the host, at times impairing the host immune machinery. A single dominant gene conferring race 1 anthracnose resistance was reported independently on two watermelon germplasm. The recent advances in genomics, transcriptomics, proteomics, and metabolomics could facilitate a better understanding of the interaction between C. orbiculare effectors and host resistance genes in the already sequenced watermelon genome. In this review, we encompass and discuss (i) the history of watermelon anthracnose, taxonomy, morphology, and diversity in races of C. orbiculare; (ii) the epidemiology of the anthracnose disease and host resistance; (iii) the genetics behind the pathogenesis; and (iv) the current advances in breeding and molecular efforts to elucidate anthracnose resistance. Full article

Tomato (Solanum lycopersicon) is a widely produced and consumed fruit vegetable worldwide. Silicon (Si) and selenium (Se) can promote crop growth and development. However, the effects of these elements on tomato fruit quality have not been investigated comprehensively, nor are their combined effects on yield and quality clear. The aim of this study was to investigate the effects of foliar application of Si and Se on tomato growth, yield and fruit quality. The tomato plants were foliarly applied with 1 mM Si and 25 μM Se individually or in combination, and the experiment was carried out in a plastic arch shed at Yangling in spring. Our results demonstrated improved plant growth by application of Si and Se, with the effect of combined treatment being more obvious. Application of Si individually or in combination with Se increased the yield. Se addition increased the concentrations of soluble sugars, vitamin C, phenols, anthocyanin, lycopene, carotenoids, Se and protein, and decreased the nitrate level, but did not affect the concentration of total organic acids in the fruit. Si application induced similar changes to Se addition in the levels of sucrose and protein in the fruit, but had no effect on other quality traits. The combined Si and Se treatment did not show significant superior effects on the fruit quality over their individual applications. Our results suggest that Si and Se application improved the tomato plant growth. Si and Se application, respectively, had obvious effects in the yield increase and quality improvement, and the combined treatment had positive effects on both aspects. The study may provide a theoretical base for the application of Se and Si fertilizers in tomato production. Full article

In apricots and other stonefruit, chilling injury (CI) symptoms like mealiness, rubberiness, and gel formation are associated with cell wall properties. Apricots were stored at 0 °C for 5 weeks and ripened at 20 °C to induce CI and compared with fruit ripened at 20 °C from harvest at similar firmness. In those apricots without CI, degradation of middle-lamella pectin during softening weakened cell-cell adhesion and intercellular junctions. Pectin was still present in middle lamella regions but pectin that filled the intercellular spaces at harvest had disappeared. Fruit with combinations of CI symptoms showed different pectin solubilities, molecular weight distribution, and differences in pectin staining compared with fruit that were severely chilling-injured, exhibiting all symptoms. The perception of mealiness correlated with the presence of pectin in the cell lumen, and rubberiness with the presence of pectin in tricellular corners. We concluded that in chilling-injured apricots, the normal softening process is not being resumed after fruit have been taken out of cold storage. Cell wall degradation is disrupted, affecting the normal weakening of cell walls during softening. Hence, cell walls were less likely to break open during chewing, and when cells did break, any juice released might be bound by pectin present in the cell walls and cell lumen, leaving a sensation of rubberiness and mealiness. Full article

Rose is a widely favored floriculture crop that is commercially propagated through the application of tissue culture techniques. Here, we report an effective method for axillary shoot proliferation in Al-Taif rose, an important cultivar for rose oil industry. Stem nodes were excised from an adult donor Al-Taif rose shrub and cultured for 4 weeks on Murashige and Skoog’s (MS) medium supplemented with 6-benzylaminopurine (BAP) or gibberellic acid (GA₃) at 0 and 3 mg·L⁻¹ to induce the sprouting of axillary shoots. Al-Taif rose shoots were cultured in vitro for 6 weeks on MS medium fortified with different concentrations of cytokinins, light/dark incubation and different culture types (gelled and liquid/bioreactor culture). The culture conditions that were applied had a noteworthy impact on the responses of Al-Taif rose shoot proliferation. The supplementation of the medium with 6-benzylaminopurine (BAP) resulted in an augmented rate of shoot proliferation in comparison to other cytokinins. Additionally, dark incubation limited foliage growth, leaf yellowing and abscission and favored shoot proliferation compared with light incubation. Liquid culture using bioreactors provided higher axillary shoot proliferation and growth as compared with gelled culture. A continuous immersion system with a net provided the highest axillary shoots (four shoots per explant) and shoot length (16.5 cm), whereas an immersion system without a net provided the highest fresh weight of axillary shoots (499 mg per explant). These findings will improve commercial propagation and contribute to the rose oil industry of Al-Taif rose. Full article

In recent years, a significant impediment to the advancement of China’s agricultural sector is the noteworthy challenge posed by diminished crop yields and quality due to ongoing continuous cropping obstacles. Numerous studies have consistently showcased the potential of plant growth-promoting rhizobacteria (PGPR) and biochar in augmenting the alleviation of continuous cropping barriers. Nevertheless, the potential of PGPR and biochar to remediate and improve continuous cropping peppers in the karst yellow soil area remains unclear. A 2-year field experiment was implemented to examine the impact of PGPR and biochar, when applied alone or in combination, on the production potential of continuous cropping peppers. The results revealed that PGPR and biochar significantly elevated the yield of fresh and dry pepper compared with TF treatment. The utilization of PGPR and biochar resulted in an augmentation of free amino acids, soluble sugar, and vitamin C content in pepper fruits, but a reduction in the nitrate content, which proved advantageous in enhancing the overall quality of peppers. Furthermore, the use of PGPR and biochar demonstrated significant benefits in enhancing NPK accumulation, fertilizer utilization, and economic efficiency. Nevertheless, the co-application of PGPR and biochar yielded significantly better results compared to their individual application. In conclusion, the utilization of PGPR and biochar demonstrated a favorable impact on the productivity and economic benefits of continuous cropping peppers. The simultaneous application of PGPR and biochar represents a promising approach to enhancing yield and improving the quality of peppers in the karst yellow soil region of Southwest China. Full article

Sustainable agriculture requires factors to directly stimulate plant growth and induce the plant’s innate immune system to protect against stresses. Protection of plants is one of the main approaches to the supply of food resource. Furthermore, improved techniques for plant disease management must be environmentally sustainable, reliable, acceptable by society, and chemical-free to ensure sustainable food security. Although it is not possible to accurately determine postharvest losses due to diseases and physiological disorders, the use of proper harvesting and transportation methods that minimize damage to the product, along with optimal storage conditions that prevent the development of diseases, will be effective in reducing these postharvest losses. Since handling and storage conditions are potential threats for postharvest spoilage, it is necessary to identify environmentally friendly approaches and their precision mechanisms for postharvest disease management. Recently, biological control, non-chemical, and eco-friendly techniques have been investigated for this purpose. Full article

It has been well documented that far-red radiation (FR; 700–799 nm) elicits a shade-avoidance/shade-tolerance response across a wide range of plant species. Most sole-source lighting is relatively low in FR compared to sunlight (i.e., 2% vs. 20% of photons, respectively, integrated between 400 and 799 nm). The objective of this experiment was to determine if the photomorphogenic response to FR is a useful strategy during the seedling stage to promote leaf expansion in the hopes that subsequently transplanted seedlings would increase radiation capture resulting in higher harvestable biomass. Lettuce (cv. ‘Rex’, ‘Red Oak’, and ‘Green Grand Rapids’) seedlings were exposed to 5, 10, 20, or 30 µmol·m⁻²·s⁻¹ of supplemental FR for a duration of 10 d in a growth chamber for 20 h daily. During this stage, all seedlings received background light levels of 195 µmol·m⁻²·s⁻¹ PAR light from white LEDs for 20 h daily. Seedlings were transplanted into a nutrient film technique (NFT) hydroponic system in a separate growth chamber with LED fixtures that supplied white light at 295 µmol·m⁻²·s⁻¹ for 16 h daily (DLI = 17 mol·m⁻²·d⁻¹) until they were harvested at 35 d from seeding. At transplant, fresh weight, leaf area, and plant height were significantly greater for all cultivars exposed to 30 µmol·m⁻²·s⁻¹ of supplemental FR radiation compared to the 5 µmol·m⁻²·s⁻¹ control. Fresh weight increased by an average of 35% under 30 µmol·m⁻²·s⁻¹ FR. Mature plant dry biomass increased by 14% when seedlings were exposed to 30 µmol·m⁻²·s⁻¹ of supplemental FR radiation. Increasing far-red radiation consistently increased plant growth at the seedling stage, but these increases were generally overcome by maturation. Full article

The present study was carried out to evaluate and characterize, for the first time, the genetic potential of a collection of onion (Allium cepa L.) local accessions from the arid region of southern Tunisia. The genetic diversity among 135 onion individuals, belonging to 23 accessions, was evaluated using microsatellite (SSR) markers and phenotypic information. A total of 35 alleles were generated with 11 SSRs. The polymorphic information content (PIC) value ranged from 0.08 to 0.95, with an average PIC of 0.43. The expected heterozygosity averaged 0.37, and the observed heterozygosity averaged 0.42. The analysis of molecular variance (AMOVA) revealed that 79% of genetic variation existed within individuals. Structure and cluster analysis grouped the accessions into two major clusters: landraces and pre-breeding lines. For the phenotypic traits evaluated, field trials were conducted in two different environments. Significant differences among accessions were shown, and for most traits, there was also a significant environmental effect and a significant interaction between environment and accession. Great variability was found for all the traits that could be exploited to create new varieties of onion adapted to local conditions by selecting appropriate parents in hybridization breeding. Full article

Utilizing multi-source remote sensing data fusion to achieve efficient and accurate monitoring of crop nitrogen content is crucial for precise crop management. In this study, an effective integrated method for inverting nitrogen content in apple orchard canopies was proposed based on the fusion of ground-space remote sensing data. Firstly, ground hyper-spectral data, unmanned aerial vehicles (UAVs) multi-spectral data, and apple leaf samples were collected from the apple tree canopy. Secondly, the canopy spectral information was extracted, and the hyper-spectral and UAV multi-spectral data were fused using the Convolution Calculation of the Spectral Response Function (SRF-CC). Based on the raw and simulated data, the spectral feature parameters were constructed and screened, and the canopy abundance parameters were constructed using simulated multi-spectral data. Thirdly, a variety of machine-learning models were constructed and verified to identify the optimal inversion model for spatially inverting the canopy nitrogen content (CNC) in apple orchards. The results demonstrated that SRF-CC was an effective method for the fusion of ground-space remote sensing data, and the fitting degree (R²) of raw and simulated data in all bands was higher than 0.70; the absolute values of the correlation coefficients (|R|) between each spectral index and the CNC increased to 0.55–0.68 after data fusion. The XGBoost model established based on the simulated data and canopy abundance parameters was the optimal model for the CNC inversion (R² = 0.759, RMSE = 0.098, RPD = 1.855), and the distribution of the CNC obtained from the inversion was more consistent with the actual distribution. The findings of this study can provide the theoretical basis and technical support for efficient and non-destructive monitoring of canopy nutrient status in apple orchards. Full article

Tea leaf components are affected by environmental factors such as insect feeding, and metabolites have been studied using specific insect and tea leaf model systems. However, in gardens, tea leaves are eaten by various insects. Because the components of tea may affect human health, the effect of insect damage on metabolites needs to be clarified. The aim of this study was to investigate the effects of insect feeding on the nonvolatile components of tea in a field experiment. Furthermore, we determined the effects of insect damage on the composition of black tea products. Tea leaves were sampled from insect-attacked and moderately insect-attacked areas. Catechins were quantified by ultra-performance liquid chromatography. Tea leaves were analyzed by ultra-performance liquid chromatography–mass spectrometry, followed by orthogonal partial least squares-discriminant analysis and molecular networking analysis. The nonvolatile components in insect-attacked leaves were significantly affected. The amounts of gallate-type catechins in highly attacked leaves were approximately 1.2 times higher than in moderately attacked leaves. Furthermore, highly attacked leaves had increased levels of afzelechin gallate, procyanidins, and hydrolyzable tannins. These results varied with previous reports that used model systems with specific insects. In addition, some of these compounds were also detected as characteristic components in black tea from highly attacked leaves. Full article

Aquaponics is currently undergoing a transformation into an intensive food production system. The initially applied systems focused on small-scale, fish-centric coupled (CAP, the aquaculture, and the hydroponic units are arranged in a single loop, and the water flows continuously from the fish tanks to the plant unit and back) aquaponics. More recently, the primary area of research interest has shifted toward larger-scale, plant-centric decoupled (aquaculture and hydroponics units are arranged in a multi-loop setup as separate functional units that can be controlled independently) systems, aiming to achieve greater economic benefits and employ more environmentally friendly practices. The objective of this study was to address gaps in the expansion of decoupled larger-scale aquaponics and to provide a comprehensive understanding of the water and nutrient flow in the system. For this purpose, experiments were performed in a greenhouse on CAP and DCAP systems, while this study also included measurements in a pure hydroponic system (HP). This study presents an assessment of the water and nutrient flow in four different crops: basil; cucumber; parsley; and tomato, all co-cultivated with a tilapia aquaculture system. Significant nutrient deficiencies and imbalances were identified in the CAP solution, leading to pronounced impacts on nutrient assimilation, particularly for fruiting vegetables. However, the average nutrient use efficiency (NUE) for nitrogen, phosphorous, potassium, and calcium was found to be 42% higher in the CAP treatment compared to HP and DCAP treatments. The nutrient solution in the DCAP treatment did not exhibit differences in water quality parameters and nutrient efficiency when compared to HP, resulting in similar effects on nutrient assimilation. Nonetheless, it was observed that DCAP plants exhibited superior NUE compared to HP plants. Full article

Fresh-cut fruits and vegetables are convenient and retain maximum nutrients. However, even minimal processing accelerates product deterioration and reduces food safety due to microbial infection. In this study, the effects of UV-C irradiation, low temperature treatment, and their combination on the microbial risk of fresh-cut bitter gourd were evaluated. Firstly, next-generation sequencing technology was utilized to identify microorganisms on the surface of fresh-cut bitter gourd after 12 h of exposure to room temperature, and a total of 34 bacterial species were identified. Subsequently, fresh-cut bitter gourd treated with UV-C or/and 4 °C and then kept at room temperature for 6 h was assessed for its viable bacterial count. The results showed that both 0.5 and 1.5 kJ·m⁻² UV-C irradiation significantly inhibited microbial growth compared to 4 °C and the no treatment control. Meanwhile, no significant differences were observed between UV-C and the combined treatments. Lower doses of UV-C irradiation reduced hydrogen peroxide and malondialdehyde content, increased the proline level, and improved the activities of antioxidant enzymes such as superoxide dismutase, ascorbate peroxidase, catalase, and critical enzymes involved in the phenylpropanoid pathway, such as phenylalanine ammonia-lyase and polyphenol oxidase. This suggests that UV-C irradiation alone can effectively reduce bacterial contamination in fresh-cut bitter gourd to an acceptable level. Full article

Papaya (Carica papaya L.) is a valuable economic crop that is widely cultivated in tropical and subtropical regions but has a short storage and shelf life. Exploring effective strategies to improve the postharvest quality of papaya is important. This study explored the effect of humidity-triggered controlled-release 1-methylcyclopropene (1-MCP) sheets on the postharvest quality of papaya fruit. ‘Rainbow’ papayas underwent cold storage at 10 ± 0.5 °C, RH 85% ± 2% for 14 days, and then were transferred to 20 ± 0.5 °C, RH 85% ± 2% for 10 days to simulate shelf life. The 1-MCP sheets were cut into different sizes and placed in storage containers in advance to create corresponding concentrations at 0.5, 1.0, 2.0, and 4.0 ppm. Results showed that 1-MCP treatment inhibited fruit softening, and reduced weight loss and peel color deterioration without causing any physiological disorders. The 1.0–2.0 ppm 1-MCP-treated fruit received the highest score for papaya flavor and sweetness respectively and the lowest score for off-flavor. The humidity-triggered controlled-release 1-MCP sheets are effective and convenient, and they can serve as an important tool for regulating postharvest papaya ripening with economic benefits. Full article

Hail, known as an agricultural meteorological disaster, can substantially constrain the growth of the apple industry. Presently, apple orchards use a variety of colored (photo-selective) hail nets as a preventative measure. However, it is unclear which color proves most effective for apple orchards. This study provides a systematic investigation of the impact of four photo-selective colored hail nets (white, blue, black, and green; with white being the control) on the microenvironment of apple orchards, fruit tree development, fruit quality, and yield over a two-year period (2020–2021). Different photo-selective nets do not evidently alter the intensity of light, although the nets’ shading effects decrease in the order from black to green to blue. Among them, blue nets increased the proportion of blue light, while green nets enhanced the proportion of green light. On the other hand, black, green, and blue nets diminished the proportion of red and far-red light. Such photo-selective nets effectively lowered soil temperature but did not have an impact on relative humidity and air temperature. Encasing apple trees with blue nets promoted growth, increasing shoot length, thickness, leaf area, and water content, while simultaneously decreasing leaf thickness. Black nets had comparable effects, although the impacts of green nets were inconsistent. Different photo-selective nets did not significantly influence the leaf shape index or overall chlorophyll content. However, black and green nets reduced the chlorophyll a/b ratio, while blue nets slightly boosted this ratio. Additionally, blue nets proved beneficial for apple trees’ photosynthesis. With the employment of a principal component analysis and comprehensive evaluation, this study concludes that blue nets offer the most favorable environmental conditions for apple growth while protecting apple orchards against hail, compared to black, white, and green nets. Full article

Grafting techniques represent an efficient tool to enhance plant growth and development. The study aims to explore the effects of different grafting combinations on the growth of eggplants under diverse greenhouse conditions. Eggplant cultivar Black bell (Bb) was employed as scion, while the hybrid F₁ Beaufort (Be) and Solanum torvum (To) were utilized as rootstock. The hypothesis behind this study pertains to grafting incompatibility with Beaufort F1. It postulates that this incompatibility can be mitigated by manipulating soil and greenhouse temperatures. The experimental factors encompassed plant combinations (Bb, Be/Bb and To/Bb), as well greenhouse and substrate temperature (both cold or heated). The Be/Bb combination showed higher values of plant vegetative traits, but it exhibited low grafting compatibility. Additionally, physiological analysis confirmed the presence of excessive growth and vegetative disorder within the Be/Bb combination. Examination of the xylem vessels revealed notable differences between the grafting combination involving Bb and the rootstock F1 hybrid Be/Bb, compared to the one with To/Bb and the non-grafted Bb. Specifically, the area, diameter and number of xylem vessels were approximatively 45% higher in Be/Bb than in To/Bb and the non-grafted Bb. Furthermore, a robust linear correlation was observed between plant height with morphometric and physiological traits, except fruits sets. This study lays the basis for a novel protocol for agriculture, addressing the excessive vegetative growth in rootstocks regulating air and substrate temperatures. Full article

Muscadine grapes (Vitis rotundifolia) are native to the southeastern U.S., where they are valued for their unique flavor and fruity aroma. Despite having a diverse aroma profile, muscadine germplasm is virtually unexplored in terms of its aroma volatile content and composition, which is crucial in determining the value of its products. The aim of this research was to characterize 24 muscadine genotypes with distinct uses and origin for their aroma-related volatile profiles using the headspace solid-phase microextraction method coupled with gas-chromatography mass spectrometry. In total, 63 volatile compounds were detected, and genotypes significantly differed for 43 of the volatile compounds. We also profiled the aroma volatile content and composition of the commercially cultivated muscadine cultivar Carlos at various stages of berry ripeness. Characteristic differences were observed in the composition of the volatile compounds as ripening progressed. This is the first study to have evaluated the aroma volatile composition of a wide variety of muscadine germplasms, including juice and fresh fruit cultivars, as well as the related species Vitis popenoei and its complex hybrids between V. rotundifolia and Vitis vinifera. The results obtained from this study will help identify muscadine genotypes and better design crosses to produce fresh fruit and wine selections with the desired aroma profiles. This knowledge will lead to the development of new muscadine cultivars and significantly contribute to the expansion of muscadine use in the future. Full article

In 2022, a test performance study (TPS) assessing the influence of different master mixes on the performance of the tetraplex real-time PCR (TqPCR) assay was organized. TqPCR allows for the specific detection and identification of Xylella fastidiosa (Xf) subspecies in a single reaction. Eighteen official laboratories of the Italian National Plant Protection Organization received a panel of 12 blind samples, controls, primers, probes, and different master mixes to participate in the TPS. Furthermore, the Research Centre for Plant Protection and Certification of the Council for Agricultural Research and Economics performed an intra-laboratory study (ITS) on spiked plant matrices to evaluate the analytical sensitivity of TqPCR employing the selected master mixes with the best performance. Naturally infected samples were analyzed for subspecies identification via TqPCR compared with the official multilocus-sequence-typing (MLST) method. The best results in this comparative study were obtained using Fast Universal PCR Master Mix (Applied Biosystems) and Brilliant multiplex QPCR Master Mix (Agilent), and they confirmed that the TqPCR test is reliable, offering the advantage of identifying this subspecies at the same time, thus saving time and resources. The TqPCR assay is suggested among the tests to be used by laboratories performing the official diagnosis of Xf to support the activities of official monitoring. Full article

Global warming has led to irregular precipitation patterns and various abiotic and biotic stresses, resulting in unforeseen consequences for wildlife. Plant species are particularly vulnerable to these global climate changes, struggling to adapt to the increasing stressors. Urban environments exacerbate these challenges, further hindering plant survival and growth. The declining number of climate- and urban-tolerant plant species is a direct consequence of escalating stresses. However, resistance breeding approaches coupled with environmentally friendly technologies like biostimulants offer hope by expanding the pool of adaptable species. Urban vegetation plays a vital role in mitigating the urban heat island effect, supporting mental well-being among residents, and preserving biodiversity. In this study, we comprehensively review recent research findings on these topics with a focus on publications from the past 5 years. Emphasizing stress-tolerant ornamental urban plants including trees and herbaceous species becomes crucial for establishing sustainable living practices. By incorporating resilient plant varieties into urban landscapes, we can enhance ecological balance while improving the overall quality of urban environments for both human inhabitants and wildlife populations. Full article

Plant regeneration through somatic embryogenesis provides a solution for maintaining and genetically improving crop or fruit varieties with desirable agronomic traits. For the fruit tree pomegranate (Punica granatum L.), despite some successful applications, the existing somatic embryogenesis protocols are limited by low availability of explants and susceptibility to browning. To address these problems, in this study, we developed an effective system for induction of high-vigor pomegranate somatic embryos derived from stem explants. The usage of stem explants breaks through the difficulty in obtaining material, thus making our system suitable for widespread commercial production. To enhance the performance of our system, we identified the optimal explants, subculture cycles and combination of basal media and plant growth regulators for each step. The results showed that inoculating stem explants onto a Murashige and Skoog (MS) medium supplemented with 1.0 mg/L 6-benzylaminopurine (6-BA) and 1.0 mg/L 1-naphthaleneacetic acid (NAA) achieved the best induction rate and growth status of pomegranate calli (induction rate = ~72%), and MS medium containing 0.5 mg/L 6-BA and 1.0 mg/L NAA was the optimal condition for the induction of embryogenic calli and somatic embryos (induction rate = ~74% and 79%, respectively). The optimal subculture period for embryogenic calli was found to be 30–35 days. Strong roots were then induced in the developed somatic embryo seedlings, which survived and grew well after transplantation to the natural environment, indicating the good vitality of the induced pomegranate somatic embryos. Together, our system provides a solution to mass somatic embryo induction and plant regeneration of pomegranate and lays a foundation for future genetic transformation and bioengineering improvement of pomegranate with favorable agronomic traits. Full article

Postharvest cherry tomatoes are prone to senescence, decay and nutrient loss during the storage period owing to microbial invasion and their own metabolism. In this work, postharvest cherry tomatoes were treated with a composite coating of 1% chitosan and 1% curdlan, and the characteristics of postharvest cherry tomatoes during storage were investigated. Compared to control samples, after 21 d of storage under ambient conditions, the cherry tomatoes treated with the chitosan and curdlan coatings showed less rottenness, less weight loss, a lower respiration rate, reduced ethylene production, lower malonaldehyde (MDA) content and reduced membrane permeability. After the samples were treated with the composite coating, the activities of free radical scavenging enzymes such as superoxide dismutase (SOD), catalase (CAT) and peroxidase (POD) were maintained at higher levels; the activities of related disease-resistant enzymes such as chitinase (CHI) and glucanase (GLU) were also maintained at higher levels. The soluble solids, titratable acidity, firmness, vitamin C content, lycopene content and antioxidant activities of postharvest cherry tomatoes treated with the composite coating exhibited higher levels as well. The composite coating of chitosan and curdlan might be a potentially promising method for preserving postharvest cherry tomatoes and other fruits. Full article

In image classification of tomato leaf diseases based on deep learning, models often focus on features such as edges, stems, backgrounds, and shadows of the experimental samples, while ignoring the features of the disease area, resulting in weak generalization ability. In this study, a self-attention mechanism called GD-Attention is proposed, which considers global pixel value distribution information and guide the deep learning model to give more concern on the leaf disease area. Based on data augmentation, the proposed method inputs both the image and its pixel value distribution information to the model. The GD-Attention mechanism guides the model to extract features related to pixel value distribution information, thereby increasing attention towards the disease area. The model is trained and tested on the Plant Village (PV) dataset, and by analyzing the generated attention heatmaps, it is observed that the disease area obtains greater weight. The results achieve an accuracy of 99.97% and 27 MB parameters only. Compared to classical and state-of-the-art models, our model showcases competitive performance. As a next step, we are committed to further research and application, aiming to address real-world, complex scenarios. Full article

This study investigates the potential use of Lolium perenne L. as a cover crop to improve vineyard soils with varying levels of copper (Cu). Cu-based fungicides are commonly used to control fungal diseases in vineyards, but their accumulation in soils poses environmental risks. This study aims to address this issue by evaluating the influence of soil properties on Cu availability and L. perenne growth. A total of 42 vineyard soils from different Designations of Origin (D.O.s) in Galicia were sampled and their physicochemical properties were analyzed. The results showed most soils exceeded recommended Cu limits due to fungicide applications. Pot experiments were conducted to assess L. perenne growth and Cu accumulation. L. perenne biomass did not vary significantly with total soil Cu content, indicating that other factors such as organic matter and cation exchange capacity were more important for plant growth. While L. perenne showed Cu tolerance, its aerial Cu accumulation was inversely correlated with available Cu. This study provides insight into the potential of L. perenne as a cover crop for sustainable vineyard management and soil improvement and emphasizes the importance of considering Cu accumulation from fungicide applications. Full article

Fusarium wilt, mainly caused by Fusarium oxysporum, affects ginger yield and quality worldwide. To explore a safe and sustainable method of preventing and controlling Fusarium wilt, the inhibitory effects of eugenol on F. oxysporum FOX-1 were analysed in this study. The results showed that eugenol inhibited the reproductive and vegetative growth of F. oxysporum FOX-1 in vitro. Microscopic observations revealed that eugenol disrupted the hyphal morphology of F. oxysporum. In addition, eugenol destroyed the cell membrane integrity of the pathogenic fungi, resulting in the leakage of F. oxysporum FOX-1 intercellular contents, including electrolytes, soluble proteins, nucleic acids, and malonydialdehyde. Results of an in vivo inoculation test showed that eugenol exerted a strong inhibitory effect on Fusarium wilt in ginger seedlings. In summary, eugenol had an inhibitory effect on the growth of F. oxysporum FOX-1 and controlled Fusarium wilt in ginger seedlings. These findings provide a foundation for future development of botanical antifungal agents to manage Fusarium wilt. Full article

Advances in measurement systems and technologies are being avidly taken up in perennial tree crop research and industry applications. However, there is a lack of a standard model to support streamlined management and integration of the data generated from advanced measurement systems used in tree crop research. Furthermore, the rapid expansion in the diversity and volumes of data is increasingly highlighting the requirement for a comprehensive data model and an ecosystem for efficient orchard management and decision-making. This research focuses on the design and implementation of a novel proof-of-concept data ecosystem that enables improved data storage, management, integration, processing, analysis, and usage. Contemporary technologies proliferating in other sectors but that have had limited adoption in agricultural research have been incorporated into the model. The core of the proposed solution is a service-oriented API-driven system coupled with a standard-based digital orchard model. Applying this solution in Agriculture Victoria’s Tatura tree crop research farm (the Tatura SmartFarm) has significantly reduced overheads in research data management, enhanced analysis, and improved data resolution. This is demonstrated by the preliminary results presented for in-orchard and postharvest data collection applications. The data ecosystem developed as part of this research also establishes a foundation for early fruit traceability across industry and research. Full article

Bactrocera dorsalis (Hendel, 1912) (Diptera: Tephritidae), commonly known as the oriental fruit fly, is a highly destructive pest that globally infests fruits and vegetables, resulting in significant annual economic losses. Initially detected in Taiwan Island, it has rapidly expanded its distribution range to various regions in mainland China since the 1980s, with a continuous northward spread. To mitigate the damage caused by this pest, extensive efforts have been undertaken to comprehend its ecological and physiological adaptations and develop management strategies. This review article provides an overview of the invasion history of B. dorsalis in China, its ecological and physiological mechanisms facilitating its invasion, and the progress made in understanding its major biological characteristics. Moreover, the key approaches for managing B. dorsalis that have been or are likely to be implemented in China are presented, including quarantine measures, monitoring procedures, physical controls, biological controls, the sterile insect technique, RNA interference, and CRISPR-Cas-9. Finally, some suggestions for future research directions are provided. Full article

(1) Background: The oil stability of tree nuts during storage can be influenced by storage conditions such as temperature, humidity, and moisture concentration. However, few studies have assessed how the presence of testa and shell affects the oil stability of tree nuts during storage. We aimed to determine how storage conditions affect oil stability in almond and canarium, in particular, the presence of testa and storage time of nut-in-shell (NIS). (2) Methods: We measured peroxide value (PV), free fatty acid (FFA) and hexanal concentrations of almond and canarium (blanched vs. kernel-in-testa) stored at 45 °C for 24 days. We also measured PV, FFA and fatty acid composition of canarium samples at days 0 and 140 stored as NIS under ambient conditions. (3) Results: The presence of testa in almond and canarium decreased hexanal and PV concentrations at day 24 of incubation. Canarium PV and FFA concentrations increased over 140 days of storage in the shell compared to day 0. However, both PV and FFA concentrations remained within the acceptable threshold during storage. No changes in fatty acid composition were found during NIS storage. (4) Conclusions: Testa and shell could act as a natural coating, slowing down oxidation rates. Hence, long-term storage on nuts in testa or nuts in shell are recommended for tree nuts. Full article

Fire blight of fruit crops is one of the most dangerous diseases for apple trees and other plants of the Rosaceae family, and in Kazakhstan, it is subject to quarantine. To study the spread of fire blight, a phytopathological evaluation of 59 apple varieties of domestic and foreign breeds was carried out in various regions of the south and southeast of Kazakhstan while also considering climatic conditions. The susceptibility of an apple tree to fire blight is influenced by the climatic conditions prevailing in a particular fruit region of Kazakhstan. Samples were collected from various varieties of apple trees with fire blight symptoms for molecular genetic analysis. The phytopathological evaluation and results of the PCR analysis made it possible to identify the causative agent of the disease and its spread to apple varieties in the main fruit regions of Kazakhstan. A molecular study of the resistance to the fire blight pathogen was carried out using the most effective molecular markers. A set of 10 (FBE-1_Y320; FBE-2_Y192; FBE-2_Y495; FBE-2_Y551; FB-MR5-K35; FB-MRS-R240; FB-MR5-R249; FB-MR5-rp16k15_M106; RLP1a; and RLP1b) SNPs was selected, including SNPs reported to be associated with three trait loci, as well as the two markers AE10-375 and GE-8019. Interestingly, the SNP analysis revealed that for all ten markers linked to fire blight resistance, the genotypes of all 59 apple cultivars were identical. No differences in the presence or absence of these markers were observed among the studied varieties. The 26 apple varieties of domestic and foreign breeds most resistant to fire blight were identified in the molecular analysis using the markers AE-375 and GE-8019. Among the studied 59 apple varieties, 23 varieties were identified using the AE-375 marker and 7 varieties with the GE-8019 marker. Samuret, Honeycrisp, Pinova, and Red Topaz were found to be resistant using markers AE-375 and GE-8019. The most promising apple varieties for further breeding for resistance to fire blight programs were selected. Full article

As the sensitivity of perennial crops to climate change becomes more pronounced, clonal selection, which is already very time-consuming for grapevine, may take even longer, while its importance is increasing. In the case of indigenous grapevine varieties, the purpose of clonal selection is twofold: to mitigate problems of cultivation and at the same time, to preserve the varietal character. The cultivation technique issue of ‘Kéknyelű’ is the low fertility (functionally female-flowered variety), and as for ‘Juhfark’ it is the significant susceptibility to grey rot. Based on daily meteorological data of 11 years, the years were classified into 3 groups and harvest data were analyzed within each group. Significant difference in yield was found between clone B.2. and the base ‘Kéknyelű’. Both clones of ‘Kéknyelű’ matured with significantly lower pH compared to the base variety. Given the acidic character of ‘Kéknyelű’ wine and the predicted rise in must °Brix and pH as a result of climate change, these differences may be useful in the future. Botrytis infection only showed statistically significant differences between year groups for ‘Juhfark’. It is intriguing that in most years, the rate of grey rot infection was lower in both clones compared to the base variety, especially in year groups 1 and 3 when the overall rate of Botrytis infection was quite low. Full article

Plants face various biotic and abiotic stress factors during their growth and development, among which, drought is a serious adverse factor that affects yield and quality in agriculture and forestry. Several transcription factors are involved in regulating plant responses to drought stress. In this study, the B-box (BBX) transcription factor CoBBX24 was cloned from Camellia oleifera. This gene encodes a 241-amino-acid polypeptide containing two B-box domains at the N-terminus. A phylogenetic analysis revealed that CoBBX24 and CsBBX24 from Camellia sinensis are in the same branch, with their amino acid sequences being identical by 96.96%. CoBBX24 was localized to the nucleus and acted as a transcriptional activator. The overexpression of CoBBX24 in Arabidopsis heightened its drought tolerance along with a relatively high survival rate, and the rate of water loss in the OX-CoBBX24 lines was observably lower than that of the wild-type. Compared to the wild-type, the root lengths of the OX-CoBBX24 lines were significantly inhibited with abscisic acid. Leaf senescence was delayed in the OX-CoBBX24 lines treated with abscisic acid. The expression of genes related to leaf senescence and chlorophyll breakdown (e.g., SAG12, SAG29, NYC1, NYE1, and NYE2) was downregulated in the OX-CoBBX24 lines. This study indicated that CoBBX24 positively regulates the drought tolerance in Arabidopsis through delayed leaf senescence. Full article

Decay caused by Neopestalotiopsis clavispora is an important postharvest disease of blueberries that seriously affects the commercial value of blueberry fruit. In this paper, we studied the inhibitory activity and mode of action of thymol against the pathogenic fungus of blueberries caused by Neopestalotiopsis clavispora. The results demonstrated that thymol administration could limit mycelial growth in vitro; the inhibitory effect was positively connected with thymol mass concentrations, and the minimal inhibitory concentration (MIC) was 100 mg/L. Further investigations revealed that MIC thymol treatment dramatically reduced the germination of pathogenic spores and led to an increase in the conductivity of the pathogen, leakage of contents, and a decrease in pH. Propidium iodide (PI) staining experiments demonstrated that MIC thymol caused damage to mycelial cell membranes. Additionally, MIC thymol treatment promoted mycelium malondialdehyde content accumulation, inhibited superoxide dismutase (SOD) and catalase (CAT) enzyme activities, decreased adenosine triphosphate (ATP), adenosine diphosphate (ADP), and adenosine monophosphate (AMP) content and energy charge levels, and the fluorescence intensity of mycelium caused by MIC thymol treatment was significantly increased by the 2,7-Dichlorodi-hydrofluorescein diacetate (DCFH-DA) assay. The results of this study indicate that thymol suppresses the proliferation of Neopestalotiopsis clavispora by compromising the integrity of their cell membranes, promoting the accumulation of cellular reactive oxygen species (ROS), and interfering with energy metabolism. Full article

Foxtail lily (Eremurus), as a medicinal-ornamental geophyte, has recently emerged in the cut flower market as a novel, commercially significant specialty cut flower (SCF). However, there is limited information about the sensitivity to ethylene of foxtail lily species for managing the ethylene-mediated senescence to prolong the vase life and maintain the ornamental quality of this flower. The purpose of the current study was to compare the ethylene production rates and patterns, as well as the responses to exogenous ethylene and ethylene inhibitors, between two species, E. spectabilis and E. persicus, to better understand the role of ethylene in Eremurus inflorescence senescence. The results revealed that exogenous ethylene (10 μL L⁻¹), as a pulsing or continuous method, dramatically accelerated petal wilting in E. spectabilis and petal abscission in E. persicus. Furthermore, the rate and patterns of endogenous ethylene production varied significantly among the two investigated species. Interestingly, E. persicus exhibited a higher rate of ethylene production than E. spectabilis on the first day after harvesting, but the reverse was true at the end of the vase life (Day 4 of the vase period). The results revealed that the treatments with ethylene inhibitors considerably improved the water relations and vase longevity of both foxtail lily species. The vase life of E. spectabilis was dramatically enhanced by silver thiosulfate complex (STS) treatment (0.2 mM pulse for 24 h) from 5 d (control) to 7 d. Furthermore, 1-methylcyclopropene (1-MCP) at 0.5 and 1.0 μL L⁻¹ markedly improved water uptake, relative fresh weight, and water balance and extended the vase life of cut inflorescences by ~2 d in E. spectabilis and E. persicus, compared with those of control cut inflorescences, respectively. This research revealed that ethylene is involved in controlling the senescence of foxtail lily flowers, and two tested species exhibited distinct forms of ethylene sensitivity, including abscission type in E. persicus and wilting-type in E. spectabilis. Collectively, these findings suggest that ethylene is involved in the senescence of cut foxtail lily inflorescence and that ethylene inhibitors can prolong vase life. Full article

The complete chloroplast genomes of red currant cultivar ‘Belaya Potapenko’ and gooseberry cultivar ‘Nekrasovskij’ were sequenced and assembled for the first time. The plastomes are 157,802 bp and 157,559 bp in length for Ribes rubrum and R. uva-crispa, respectively. The R. rubrum cp genome is 243 b.p. longer. It has one more protein-coding gene ycf1, which is pseudogenized in the R. uva-crispa cp genome. In total, 56 and 54 simple sequence repeats (SSRs) were identified within the assembled plastid genomes. The SSR content of plastid genomes was assessed for the 18 Saxifragales species. Phylogeny inference based on plastome data of 18 Saxifragales revealed that all Ribes species are clustered together on the phylogenetic tree, though R. fasciculatum seems to be the most distant from the other analyzed Ribes species. The position of taxa inside the Ribes genus clade does not support the concept of its division into five subgenera. All Ribes species share approximately the same set of protein-coding genes in their plastome sequences. There was multiple independent pseudogenization of the ycf1 gene within the Ribes genus as well as other Saxifragales taxa. Negative selection was observed for most of the genes in both the Ribes group and Saxifragales. A positive selection ratio was observed only inside the Ribes group for the ycf4 and clpP genes. Together with positive selection signatures, pseudogenization events of ycfs genes perhaps reflect that these genes’ evolution was important for Ribes’ adaptation. Thus, our study provides genomic resources and valuable reference for marker development, and makes some clarifications of the phylogenomics of the Ribes genus. Full article

Cauliflower is a nutritious vegetable with inflorescences that are specialized to form the edible organs called curds. Uncovering key genes underlying important traits is crucial for the genetic improvement of this important crop. However, the genetic basis of many important agronomic traits, including curd performance and plant architecture in cauliflower, remains unclear. GWASs have proved to be powerful tools to study agronomic traits in many crops. To reveal the genetic basis of four important agronomic traits, namely, the main stem height (MSH), purplish curd (PC), external leaf wing (ELW) and weight of a single curd (WSC), we selected 220 core accessions of loose-curd cauliflower for resequencing, phenotypic investigation and GWAS. The approach revealed significant novel loci. We detected several significant associations: on C02 for MSH and PC, on C06 for ELW and on C01 for WSC. More interestingly, we identified a significant single-peak signal for the weight of a single curd (WSC), an important yield trait, and within this signal interval, we identified the BOB01G136670 gene with five SNPs encoding nonsynonymous mutations in the CDS region; these mutations resulted in two haplotypes with significant differences in curd weight. The weight of a single curd was significantly increased in the varieties with the BOB01G136670 ^Hap1 allele compared to those with BOB01G136670 ^Hap2. BOB01G136670 was highly conserved with the homologous genes that encode serine carboxypeptidase and belong to the S10 family in other species, including GS5, which functions as a positive regulator of grain size in rice, wheat and maize. Additionally, BOB01G136670 was highly expressed specifically at the curd enlargement stage, with low or even no expression at all in other tissues and stages, indicating that BOB01G136670 is a plausible candidate gene for WSC. Overall, this study identified genomic loci for four important agronomic traits that are relevant for accelerating biological breeding and the improvement of cauliflower varieties. Full article

For a long time, species of the genus Salix have been widely utilized and studied as medicinal plants; however, the biological activity and phytochemical composition of Salix schwerinii (SS) and S. kochiana (SK) have not been studied at all. This study investigated the antioxidant properties of SS and SK extracts and detected phytochemical compounds in the extracts. The results showed that the antioxidant activities (IC₅₀) of SS extract, SK extract, and ascorbic acid (reference) were as follows, respectively: 169.8, 79.8, and 71.2 μg mL⁻¹ for ABTS cation radical scavenging and 38.4, 26.2, and 9.3 μg mL⁻¹ for DPPH free radical scavenging. The results imply that SK has a high potential as a natural antioxidant. The phytochemical compositions of extracts (mg g⁻¹) were analyzed as follows: SS extracts, 217.7 phenolics (1.54 catechin, 0.86 syringic acid, 0.46 luteolin, and others) and 5.06 salicin; SK extracts, 71.0 phenolics (0.54 catechin, 0.28 myricetin, 0.12 salicylic acid, and others) and 2.11 salicin. Compared to previous studies, the present findings go further to highlight that SS deserves attention as a novel source of salicin. The present study highlights the need for further studies on the aspects of medicinal functions of the extracts, bioprocess design for efficient phytochemical extraction, and applications of bioactive substances. Full article

Herbs are considered substantial sources of antioxidant compounds, playing an important role in medicines, cosmetics, and distillates. Although they have been used in wine since ancient times, especially in Mediterranean regions, there is limited scientific evidence on how the addition of herbs into wine affects its properties. The aim of the present study was to determine the effects of three herbs, Salvia officinalis, Melissa officinalis and Cannabis sativa, with direct extraction in two different conditions: in must (pre-fermentation addition) and in wine (post-fermentation addition) and investigate potential differences between them. Three Greek indigenous grape varieties of Vitis vinifera L. were evaluated (Roditis, Muscat, Fokiano). The extractability of phenolic compounds and the antioxidant capacity of the produced wines were determined by the Folin–Ciocalteu and DPPH methods, respectively. Moreover, HPLC analysis was conducted to identify and quantify rosmarinic acid and caffeic acid, two main components of many Lamiaceae plants. The results indicate that the post-fermentation addition of herbs leads to a significant increase in antioxidant activity and phenolic compounds compared to blank wine. In most cases, the increase is significantly higher in comparison with pre-fermentation addition. Wine, upon the addition of Melissa officinalis, was found to extract the highest amount of total phenols compared to the other two herbs. Full article

Sweet cherry may develop surface pitting during prolonged cold storage, and susceptibility among varieties is related to metabolites in response to cold and mechanical damage. This study aimed to evaluate the metabolic changes in sweet cherry fruits subjected to melatonin treatment and induced surface pitting. Melatonin (400 µM) was applied to sweet cherries before pitting induction and then stored at 1 °C for 20 d. Melatonin treatment attenuated the severity of pitting damage during cold storage, with an average severity value of 3.1 for cherries with melatonin and 2.6 without melatonin. In addition, melatonin application appeared to modulate metabolic responses due to the regulation of metabolic pathways related to abiotic stress. Upregulation of different secondary metabolites was observed after 16 h of melatonin treatment and cold storage. Moreover, some metabolites of the sphingolipid and sulfur metabolism were upregulated after 10 d. This research is the first to show that melatonin may influence the response of sweet cherries to cold and mechanical damage. Full article

Citrus fruits are vulnerable to green mold (caused by Penicillium digitatum) and blue mold (caused by Penicillium italicum) during storage, posing significant challenges to the industry. Therefore, biological control utilizing antagonistic bacteria has emerged as a dependable strategy for managing postharvest diseases. In this study, halophilic bacterial isolates were carefully selected from diverse saline ecosystems, including the Dead Sea, the Agadir Sea, the Rabat Sea, saline soil, and water of the Amassine Oued in Taounate, based on rigorous in vitro and in vivo antagonism bioassays. Out of 21 bacteria from different saline environments, 10 were chosen for further characterization based on the 16S rDNA gene. Notably, the EAM1 isolate demonstrated exceptional inhibitory effects, reaching a 90% inhibition rate against P. digitatum, while the ER2 isolate closely followed with an 89% inhibition rate against P. italicum. Furthermore, in bacterial supernatant experiments, six bacterial isolates effectively curbed the growth of P. digitatum, and three demonstrated efficacy against P. italicum development. In an in vivo trial spanning ten days of incubation, three highly effective isolates against P. digitatum displayed zero severity, and two of these isolates also demonstrated zero severity against P. italicum. Interestingly, a comparison of bacterial filtrates revealed that all isolates exhibited a severity level of over 50% against the pathogen causing green rot (P. digitatum), while the severity was lower than 50% for the supernatants of the two isolates used against P. italicum. In conclusion, this study highlights the promising role of halophilic bacteria, specifically Bacillus amyloliquefaciens EAM1 and B. amyloliquefaciens ER2, in controlling postharvest fruit pathogens. The findings shed light on the potential of utilizing these bioprotective agents to address the challenges posed by green and blue citrus molds, providing valuable insights for the citrus industry. Full article

The Munake grape is a local variety of grape that is widely distributed in Xinjiang, China. This study aims to clarify the genetic structure of the Munake grape population, characterize genetic differentiation and gene flow among populations, gather germplasm, and establish the core germplasm collection. In total, 144 samples were collected from eight geographic populations. Twenty-two SSR markers were used to characterize the genetic diversity as well as the genetic structure of Munake grape germplasm and to establish the core germplasm collection. At each site, the average number of effective alleles (Ne) was 5.019. Overall, genetic diversity was high in the various geographic populations of Munake grapes. Polymorphic information content (PIC) ranged from 0.501 to 0.908, with an average of 0.728. Estimates of genetic differentiation and gene flow indicated that the Artux population had significant genetic differences from the other populations. Screening results indicated that a sampling proportion of 95% of the sample was required to achieve 100% allelic coverage, or a sampling proportion of 65% for 95% allelic coverage. This analysis was based on conventional genetic diversity indicators, with a core germplasm diversity index of 95% coverage. Characterization of the genetic diversity of germplasm from 144 Munake grapes not only provides valuable resources for future genetic mapping and functional genome research, but also facilitates the utilization of core germplasm and molecular breeding of Munake grapes. Full article