Special Issues

Fermentation publishes Special Issues to create collections of papers on specific topics, with the aim of building a community of authors and readers to discuss the latest research and develop new ideas and research directions. Special Issues are led by Guest Editors, who are experts on the topic and all Special Issue submissions follow MDPI's standard editorial process. The journal’s Editor-in-Chief and/or designated Editorial Board Member will oversee Guest Editor appointments and Special Issue proposals, checking their content for relevance and ensuring the suitability of the material for the journal. The papers published in a Special Issue will be collected and displayed on a dedicated page of the journal’s website. Further information on MDPI's Special Issue policies and Guest Editor responsibilities can be found here. For any inquiries related to a Special Issue, please contact the Editorial Office.

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Current Trends in Bioprocesses for Waste Valorization
edited by , Laura Vargas-Estrada and
submission deadline 31 Dec 2025 | 4 articles | Viewed by 6457 | Submission Open
Keywords: waste valorization; algal biomass; microbial fermentation; membrane technology; anaerobic digestion; bioenergy; circular economy
(This special issue belongs to the Section Industrial Fermentation)
Lactic Acid Bacteria: Evaluation of Benefits on Human Health and Improvement of Food Safety
edited by Patricia Castellano, Susana Salva and
submission deadline 31 Dec 2025 | 6 articles | Viewed by 5842 | Submission Open
Keywords: lactic acid bacteria; probiotic and postbiotics; functional food; human health applications; food safety; biopreservation; genetic engineering; food quality
(This special issue belongs to the Section Fermentation for Food and Beverages)
10th Anniversary of Fermentation: Feature Papers in the “Fermentation Process Design” Section submission deadline 31 Dec 2025 | 5 articles | Viewed by 5626 | Submission Open
Keywords: process design; bioreactor performance; scale-up; scale-down; microbial kinetics; fed-batch; purification methods; bioprocess monitoring
(This special issue belongs to the Section Fermentation Process Design)
Novel Strategies and Emerging Technologies in Functional and Sustainable Food Systems submission deadline 31 Dec 2025 | 2 articles | Viewed by 4888 | Submission Open
Keywords: starter cultures; fermented foods and beverages; functional ingredients; dairy products; probiotics; prebiotics; synbiotics; sustainable processes; microbiome applications; food security; circular economy; functional food regulations
(This special issue belongs to the Section Fermentation for Food and Beverages)
Bioactive Compounds in Grain Fermentation: 2nd Edition
edited by and
submission deadline 31 Dec 2025 | 2 articles | Viewed by 4320 | Submission Open
Keywords: cereal grains; fermentation; bioactive compounds; digestion and absorption; gastrointestinal tract; polyphenols; flavones; antioxidants; fermented food; health benefits
(This special issue belongs to the Section Fermentation for Food and Beverages)
Energy Converter: Anaerobic Digestion, 2nd Edition
edited by
submission deadline 31 Dec 2025 | 1 articles | Viewed by 3757 | Submission Open
Keywords: anaerobic digestion; organic wastes; biogas; renewable natural gas; nutrient recovery; volatile fatty acids; anaerobic digester; bioproducts; organic fertilizer; solid digestate; anaerobic effluent
(This special issue belongs to the Section Industrial Fermentation)
Applications of Computer Science and AI to Fermented Foods and Beverages
edited by
submission deadline 31 Dec 2025 | 1 articles | Viewed by 2015 | Submission Open
Keywords: fermented food and beverages; wine; beer; aroma and flavor; AI; data science; machine learning; deep learning; natural language processing; wine informatics
(This special issue belongs to the Section Fermentation Process Design)
Emerging Microbial Technologies in Fermentation: Innovations in Food, Environmental, and Health Bioprocesses submission deadline 31 Dec 2025 | 2 articles | Viewed by 1754 | Submission Open
Keywords: environmental biotechnology; functional foods; genetically engineered microorganisms; microbial fermentation; postbiotics and microbial metabolites; probiotic biotechnology; sustainable bioprocesses; synthetic biology and microbial consortia; valorization of agro-industrial by-products
(This special issue belongs to the Section Fermentation for Food and Beverages)
Sustainable Grape Production, Climate Change, and Wine Quality
edited by Rafael Andrés Peinado Amores
submission deadline 31 Dec 2025 | 1 articles | Viewed by 1254 | Submission Open
Keywords: climate change; sustainable grape production; biotechnology; non-Saccharomyces species; wine aroma
(This special issue belongs to the Section Fermentation for Food and Beverages)
New Research on Fungal Secondary Metabolites, 3rd Edition
edited by
submission deadline 31 Dec 2025 | 1 articles | Viewed by 895 | Submission Open
Keywords: functional gene and genome; solid-state cultivation; metabolic pathway; bioprocessing efficiency; chemical inducers; high-throughput screen; co-cultivation; pilot-scale study; kinetic modeling; structural modification
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Women’s Special Issue Series: Fermentation
edited by and
submission deadline 31 Dec 2025 | Viewed by 488 | Submission Open
Keywords: microbial metabolism; fermentation process; strain improvement; bioprocesses; bioreactor design; scale-up; beverages; fermented food; bioconversion; biofuels; commodity chemicals; pharmaceuticals; bioproducts; probiotics; gut microbiota
Dissecting Actinobacteria: From Ecology and Biotechnological Value to Synthetic Biology
edited by , Mariana Lanfranconi and José Sebastián Dávila Costa
submission deadline 31 Dec 2025 | Viewed by 210 | Submission Open
Keywords: microbial production; metabolic pathways; omic techniques; microbial degradation; genetic engineering; process optimization
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Biotechnological Strategies for Agro-Industrial Food Waste Management
edited by
submission deadline 31 Dec 2025 | Viewed by 119 | Submission Open
Keywords: agricultural food waste; food waste management; bioenergy; biofuel; waste valorization; biotechnology; starter cultures; fermentation process
(This special issue belongs to the Section Industrial Fermentation)
Application of Fermentation Technology in Biomass Utilization and Biofuels Production, 2nd Edition
edited by
submission deadline 31 Dec 2025 | Viewed by 112 | Submission Open
Keywords: photo fermentation; electro fermentation; dark fermentation; integrated fermentation; liquid biofuels production; biogas/biohydrogen production and purification; lifecycle analysis of bioenergy production; metabolic engineering; economical evaluation of bioenergy production
(This special issue belongs to the Section Industrial Fermentation)
Microbiological Challenges in Malt and Beer Production
edited by Sunčica Beluhan, Ksenija Markov and Andreja Leboš Pavunc
submission deadline 31 Dec 2025 | Viewed by 76 | Submission Open
Keywords: climate change factors; mycotoxigenic fungi and mycotoxins; yeast; bacteria; beer quality; microbiological spoilage; consumer risk assessment
(This special issue belongs to the Section Fermentation for Food and Beverages)
Biodegradation of Microplastics by Fermentative Microorganisms
edited by and Yufen Wang
submission deadline 31 Dec 2025 | Viewed by 72 | Submission Open
Keywords: microplastic biodegradation; microbe– plastic interactions; enzymatic depolymerization; pretreatment; fermentative consortia; anaerobic fermentation; metabolomics; metagenomics
(This special issue belongs to the Section Fermentation Process Design)
Emerging Trends in Functional Lipid Biosynthesis and Precision Fermentation submission deadline 10 Jan 2026 | Viewed by 95 | Submission Open
Keywords: functional lipids; innovative foods; food ingredients; life cycle analysis; precision fermentation; bioprocesses; metabolic engineering
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Waste as Feedstock for Fermentation, 2nd Edition
edited by Fernanda Cortez Lopes and Marilene Henning Henning Vainstein
submission deadline 15 Jan 2026 | 2 articles | Viewed by 3470 | Submission Open
Keywords: waste feedstock; fermentation processes; biofuels; biochemicals; circular economy; agricultural residues; food waste; industrial by-products; waste valorization; sustainable solutions
(This special issue belongs to the Section Industrial Fermentation)
Microbial Cell Factories for the Production of Functional Compounds
edited by Nobuhiro Aburai
submission deadline 20 Jan 2026 | 3 articles | Viewed by 6934 | Submission Open
Keywords: lipid production; peptide production; carbohydrate production; secondary metabolite; bioactive compound; biosynthesis; photosynthesis; respiration; fermentation; microbial conversion
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Fermentation Processes and Product Development
edited by
submission deadline 20 Jan 2026 | Viewed by 128 | Submission Open
Keywords: fermentation technologies; bioprocess intensification; sustainable biomanufacturing; scale-up strategies; bio-based products; industrial biotechnology; circular bioeconomy; biomass valorisation; environmental impact reduction; renewable feedstocks
(This special issue belongs to the Section Fermentation Process Design)
Data-Driven Design and Analysis of Industrially Applicable Microbes
edited by and
submission deadline 20 Jan 2026 | Viewed by 108 | Submission Open
Keywords: data-driven microbial engineering; computational biotechnology; flux balance analysis (FBA); genome-scale metabolic models (GEMs); metabolic optimization; industrial microbiology; systems biology; machine learning in biotechnology; bioproduction; omics integration
(This special issue belongs to the Section Fermentation Process Design)
Biotechnological Approaches to the Valorization of Agro-Industrial By-Products submission deadline 28 Jan 2026 | Viewed by 113 | Submission Open
Keywords: fruit and vegetable by-products; residues; aquafeed; bioactive; antimicrobial; functional; food
(This special issue belongs to the Section Industrial Fermentation)
Exploring Fermentation Strategies for the Valorization of Food By-Products and Their Bioactive Potential submission deadline 30 Jan 2026 | 5 articles | Viewed by 5931 | Submission Open
Keywords: by-products; solid-state fermentation; submerged fermentation; health benefits; bioactive compounds; extraction; enzymes
(This special issue belongs to the Section Fermentation for Food and Beverages)
Technological Advances in Lignocellulosic Biomass Conversion to Bioenergy
edited by Héctor M. Poggi-Varaldo
submission deadline 30 Jan 2026 | 6 articles | Viewed by 5354 | Submission Open
Keywords: bioenergy; biorefinery; bioelectrochemical systems; fermentation processes; economic feasibility; gas biofuels; lignocellulosic biomass; liquid biofuels; organic wastes; value-added products; sustainability
(This special issue belongs to the Section Industrial Fermentation)
Yarrowia lipolytica: A Beneficial Yeast as a Biofactory for Biotechnological Applications: 3rd Edition submission deadline 31 Jan 2026 | 2 articles | Viewed by 4240 | Submission Open
Keywords: Yarrowia lipolytica; secondary metabolites; single-cell oils (SCO); lipid accumulation; single-cell proteins (SCP); enzymes biosynthesis; lipases production; metabolic engineering; organic acids synthesis; agri-food waste upgradation; whole-cell catalysis; biosynthesis of metal nanoparticles; bioreactor processes
(This special issue belongs to the Section Yeast)
Producing Lipids and Lipid Derivatives by Fermentation Using Agro-Industrial By-Products as Substrates
edited by
submission deadline 31 Jan 2026 | 1 articles | Viewed by 1099 | Submission Open
Keywords: fermentation; low-cost substrate transformation; white biotechnology; genetic engineering; extraction; chemical transformation of microbial lipids; high-value-added compounds
(This special issue belongs to the Section Industrial Fermentation)
Lactic Acid Bacteria: Fermentation submission deadline 31 Jan 2026 | 1 articles | Viewed by 869 | Submission Open
Keywords: lactic acid bacteria (LAB); fermentation; strain improvement; bioprocess engineering; food biotechnology; metabolic engineering; systems biology; functional foods; omics; microbial physiology
(This special issue belongs to the Section Fermentation for Food and Beverages)
Probiotic Lactic Acid Bacteria and Their Applications in Food Safety and Animal Health submission deadline 31 Jan 2026 | 1 articles | Viewed by 861 | Submission Open
Keywords: lactic acid bacteria (LAB); probiotics; fermented foods; food chain; food safety; foodborne diseases; animal health; biopreservation; pathogens
(This special issue belongs to the Section Probiotic Strains and Fermentation)
Food Wastes: Feedstock for Value-Added Products: 6th Edition
edited by
submission deadline 31 Jan 2026 | Viewed by 110 | Submission Open
Keywords: food waste; circular economy; value-added products; bioeconomy; biorefinery; integrated bioprocesses; bioenergy; bio-hydrogen; biomethane; biohythane; biobased products; platform chemicals; biofuels; bioethanol; butanol; bio-diesel; microbial fuel cell (MFC); enzymes; biopolymers; organic acids
(This special issue belongs to the Section Fermentation for Food and Beverages)
Fermented Foods for Boosting Health: 2nd Edition
edited by Jia Song
submission deadline 31 Jan 2026 | Viewed by 90 | Submission Open
Keywords: health benefits; traditional fermented foods; fermentation; functional foods; bioactive molecules; antioxidants; antidiabetics; gut microbiome; polysaccharides
(This special issue belongs to the Section Fermentation for Food and Beverages)
Indigenous Microbial Fermentation: Uncovering Natural Microbes and Traditional Knowledge for Sustainable Food and Feed Systems
edited by , Mona M. M. Y. Elghandour and
submission deadline 31 Jan 2026 | Viewed by 83 | Submission Open
Keywords: natural microbes; fermented feeds; climate change; nutrient bioavailability; animal productivity; animal heat stress
(This special issue belongs to the Section Fermentation for Food and Beverages)
Fermentative Biomass Upcycling: From Residual Feedstocks to Low-Carbon Products
edited by
submission deadline 31 Jan 2026 | Viewed by 52 | Submission Open
Keywords: fermentative upcycling; residual biomass; lignocellulosic bioprocessing; process scale-up
(This special issue belongs to the Section Industrial Fermentation)
Alcoholic Fermentation
edited by
submission deadline 10 Feb 2026 | 4 articles | Viewed by 3715 | Submission Open
Keywords: alcoholic fermentation; Saccharomyces cerevisiae; metabolic pathways; fermentation efficiency; beverage industry; biotechnology; flavor development; sustainability
(This special issue belongs to the Section Fermentation for Food and Beverages)
Development and Application of Starter Cultures, 2nd Edition submission deadline 15 Feb 2026 | 4 articles | Viewed by 6783 | Submission Open
Keywords: starter cultures; fermented food; microbial biodiversity; metagenomics; traditional foods; food safety; antibiotic resistance; microbial culture collections; gut microbiota; probiotics
(This special issue belongs to the Section Fermentation for Food and Beverages)
Lignin: Fermentation and Biorefinery Potential
edited by and
submission deadline 20 Feb 2026 | 1 articles | Viewed by 2000 | Submission Open
Keywords: cellulose; hemicellulose; lignin; biorefinery; development of novel enzymes; biofuels
(This special issue belongs to the Section Industrial Fermentation)
Traditional and Innovative Fermented Dairy Products submission deadline 20 Feb 2026 | Viewed by 124 | Submission Open
Keywords: fermented dairy products; cheese; yogurt; kefir; fermented milk; artisanal dairy products; starter culture; adjunct culture; probiotic culture; autochthonous microorganisms
(This special issue belongs to the Section Fermentation for Food and Beverages)
Systems Metabolic Engineering for the Production of Value-Added Compounds
edited by and
submission deadline 20 Feb 2026 | Viewed by 93 | Submission Open
Keywords: heterologous biosynthesis; bioproducts; natural products; genetic engineering; metabolic engineering; bioprocess
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Antimicrobial Metabolites: Discovery, Biosynthesis, High-Yield Production and Antimicrobial Mechanisms
edited by Xuekui Xia and Chengwei Liu
submission deadline 26 Feb 2026 | Viewed by 169 | Submission Open
Keywords: natural product; peptide; antibacterial; antifungal; antiviral; biosynthesis; high-yield production; antimicrobial mechanism
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Fungal Biotechnology: Exploring the Potential of Solid State Fermentation for Sustainable Production
edited by Lilia Arely Prado-Barragán and
submission deadline 28 Feb 2026 | 5 articles | Viewed by 10640 | Submission Open
Keywords: fungal solid state fermentation; circular economy; by-products; valorization; waste bioconversion; high-value organic compounds; biofunctional molecules; biostimulants; biopesticides; biosurfactants; biomaterials; biotextiles; biorefinery; biodyes; biopigments
(This special issue belongs to the Section Industrial Fermentation)
Turning Organic Solid Waste into Soil Nutrients Using Biological Technology
edited by and Yuanwang Liu
submission deadline 28 Feb 2026 | 4 articles | Viewed by 5369 | Submission Open
Keywords: sustainable waste management and disposal; microbial degradation; composting; biological nutrients removal and recovery; resources recovery from waste; anaerobic digestion; vermicomposting
(This special issue belongs to the Section Industrial Fermentation)
Trends in the Development and Use of Fermented Dairy Products, 3rd Edition submission deadline 28 Feb 2026 | 2 articles | Viewed by 4681 | Submission Open
Keywords: fermented milks; cheese; autochthonous dairy products; goat's cheese; kefir; yoghurt; koumiss/kumis; whey fermentation; kombucha; probiotics; postbiotics; bioactive peptides; encapsulation; plant extracts and essential oils in fermented milks and cheese; innovative processing methods; minimally processed fermented dairy products; personalized dairy products; plant-based analogues to fermented dairy products; rheology; proteolysis
(This special issue belongs to the Section Fermentation for Food and Beverages)
Fermentation Strategies to Enhance Feed Nutritional Value and Optimize Industry Resources submission deadline 28 Feb 2026 | 4 articles | Viewed by 4444 | Submission Open
Keywords: animal feed optimization; waste valorization; nutrient bioavailability; sustainable feed ingredients; microbial fermentation; feed efficiency improvement; protein enhancement in feed; gut health and microbiota; fishmeal replacement; soybean meal replacement
(This special issue belongs to the Section Industrial Fermentation)
Application of Lactobacillus in Fermented Food and Beverages, 2nd Edition submission deadline 28 Feb 2026 | 1 articles | Viewed by 2533 | Submission Open
Keywords: Lactobacillus; fermented food; fermentation quality; starter culture; food safety; probiotic; health; microbiota; omics analysis
(This special issue belongs to the Section Fermentation for Food and Beverages)
Fermentation-Driven Biotechnological Valorization of Bioactive Compounds from Plants submission deadline 28 Feb 2026 | 1 articles | Viewed by 1240 | Submission Open
Keywords: fermentation; biotransformation; plant bioactives; natural products; microbial valorization; bioprocessing; sustainable biotechnology
(This special issue belongs to the Section Industrial Fermentation)
Fermentation of Organic Waste for High-Value-Added Product Production—2nd Edition
edited by
submission deadline 28 Feb 2026 | 1 articles | Viewed by 689 | Submission Open
Keywords: fermentation; organic waste; sewage sludge; food waste; algae; agricultural straw; brewery wastewater; food wastewater; slaughterhouse wastewater; volatile fatty acids; medium-chain fatty acids; polyhydroxyalkanoates (PHA)
(This special issue belongs to the Section Industrial Fermentation)
Metabolic Engineering, Strain Modification and Industrial Application
edited by
submission deadline 28 Feb 2026 | Viewed by 331 | Submission Open
Keywords: metabolic engineering; synthetic biology; strain improvement; industrial applications
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Innovations in Gluten Free (GF) Bread Production Through Fortification with Functional Supplements submission deadline 28 Feb 2026 | Viewed by 242 | Submission Open
Keywords: supplements; bread; gluten free; sourdough; LAB; nutritive value; fortification
(This special issue belongs to the Section Fermentation for Food and Beverages)
Production of Added-Value Metabolites Through Microbial Fermentation submission deadline 28 Feb 2026 | Viewed by 117 | Submission Open
Keywords: microbial fermentation; value added; metabolic; waste; microbial cell factories
(This special issue belongs to the Section Microbial Metabolism, Physiology & Genetics)
Applications of Microbial Biodiversity in Wine Fermentation
edited by , Karina Medina and
submission deadline 28 Feb 2026 | Viewed by 85 | Submission Open
Keywords: saccharomyces yeast; non-saccharomyces yeast; lactic acid bacteria; acetic acid bacteria; Brettanomyces; winemaking; vineyard; oenological microbiota; microbial consortium; winery grape; innovation; sustainability; bioprotection
(This special issue belongs to the Section Fermentation for Food and Beverages)
Lignocellulosic Biomass Valorisation, 2nd Edition
edited by Indrikis Muiznieks and
submission deadline 28 Feb 2026 | Viewed by 69 | Submission Open
Keywords: lignocellulosic biomass; integrated bioprocess; bioactive compounds; separation and purification; bacterial; yeast; and fungal strain development; cellulases and laccases; assessment of fermentation product activity
(This special issue belongs to the Section Industrial Fermentation)
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