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Non-Coding RNA, Volume 8, Issue 4

2022 August - 18 articles

Cover Story: In diabetic kidney disease when various cellular functions are impaired, mesangial cells are crucial for the maintenance of the glomerular environment. However, diabetes-evoked dysregulation can result in both mesangial proliferation and apoptosis. It still needs to be elucidated which factors cause the decision for one or the other way. Here, we analyzed and discussed the relevance of the interplay of the lncRNA NEAT1 and the miRNA miR-339-5p for mesangial cell physiology in several injury models. While NEAT1 is mainly upregulated in cancer cells promoting, e.g., proliferation, we observed a reduced mesangial NEAT1 expression. Silencing NEAT1 resulted in differential expression of various coding genes and miRNAs, especially miR-339-5p, which was upregulated. Overexpression of miR-339-5p caused a similar phenotype, such as a knockdown of NEAT1. View this paper
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Articles (18)

  • Article
  • Open Access
6 Citations
3,094 Views
9 Pages

Knockdown of lncRNA TP53TG1 Enhances the Efficacy of Sorafenib in Human Hepatocellular Carcinoma Cells

  • Qingchun Lu,
  • Mingyang Xin,
  • Qian Guo,
  • Brad S. Rothberg,
  • Ana M. Gamero and
  • Ling Yang

The multikinase inhibitor, sorafenib, is a first-line treatment for hepatocellular carcinoma (HCC), but its limited efficacy, drug resistance and toxicity are a concern. In this study, we investigated the role of lncRNA TP53TG1 in the efficacy of sor...

  • Review
  • Open Access
40 Citations
8,233 Views
26 Pages

Liquid Biopsy and Circulating Biomarkers for the Diagnosis of Precancerous and Cancerous Oral Lesions

  • Giuseppe Gattuso,
  • Salvatore Crimi,
  • Alessandro Lavoro,
  • Roberta Rizzo,
  • Giorgia Musumarra,
  • Simona Gallo,
  • Flavia Facciponte,
  • Sabrina Paratore,
  • Angela Russo and
  • Luca Falzone
  • + 4 authors

Oral cancer is one of the most common malignancies worldwide, accounting for 2% of all cases annually and 1.8% of all cancer deaths. To date, tissue biopsy and histopathological analyses are the gold standard methods for the diagnosis of oral cancers...

  • Review
  • Open Access
8 Citations
6,246 Views
15 Pages

Long Non-Coding RNAs: The New Frontier into Understanding the Etiology of Alcohol Use Disorder

  • Allie N. Denham,
  • John Drake,
  • Matthew Gavrilov,
  • Zachary N. Taylor,
  • Silviu-Alin Bacanu and
  • Vladimir I. Vladimirov

Alcohol use disorder (AUD) is a complex, chronic, debilitating condition impacting millions worldwide. Genetic, environmental, and epigenetic factors are known to contribute to the development of AUD. Long non-coding RNAs (lncRNAs) are a class of reg...

  • Review
  • Open Access
14 Citations
4,909 Views
18 Pages

Polymeric Carriers for Delivery of RNA Cancer Therapeutics

  • Sofía Mirón-Barroso,
  • Joana S. Correia,
  • Adam E. Frampton,
  • Mark P. Lythgoe,
  • James Clark,
  • Laura Tookman,
  • Silvia Ottaviani,
  • Leandro Castellano,
  • Alexandra E. Porter and
  • Jonathan Krell
  • + 1 author

As research uncovers the underpinnings of cancer biology, new targeted therapies have been developed. Many of these therapies are small molecules, such as kinase inhibitors, that target specific proteins; however, only 1% of the genome encodes for pr...

  • Article
  • Open Access
3 Citations
3,077 Views
18 Pages

SV40 miR-S1 and Cellular miR-1266 Sequester Each Other from Their Targets, Enhancing Telomerase Activity and Viral Replication

  • Tetsuyuki Takahashi,
  • Hirona Ichikawa,
  • Yukiko Okayama,
  • Manami Seki and
  • Takao Hijikata

Virus-encoded microRNAs (miRNAs) target viral and host mRNAs to repress protein production from viral and host genes, and regulate viral persistence, cell transformation, and evasion of the immune system. The present study demonstrated that simian vi...

  • Article
  • Open Access
15 Citations
6,807 Views
16 Pages

Systematic Analysis of Long Non-Coding RNA Genes in Nonalcoholic Fatty Liver Disease

  • Mirolyuba Ilieva,
  • James Dao,
  • Henry E. Miller,
  • Jens Hedelund Madsen,
  • Alexander J. R. Bishop,
  • Sakari Kauppinen and
  • Shizuka Uchida

The largest solid organ in humans, the liver, performs a variety of functions to sustain life. When damaged, cells in the liver can regenerate themselves to maintain normal liver physiology. However, some damage is beyond repair, which necessitates l...

  • Review
  • Open Access
17 Citations
6,348 Views
17 Pages

miR-218: A Stress-Responsive Epigenetic Modifier

  • Grant Schell,
  • Bhaskar Roy,
  • Kevin Prall and
  • Yogesh Dwivedi

Understanding the epigenetic role of microRNAs (miRNAs) has been a critical development in the field of neuropsychiatry and in understanding their underlying pathophysiology. Abnormalities in miRNA expression are often seen as key to the pathogenesis...

  • Review
  • Open Access
11 Citations
4,801 Views
22 Pages

Current Status of Regulatory Non-Coding RNAs Research in the Tritryp

  • Rafael Sebastián Fort,
  • Santiago Chavez,
  • Juan M. Trinidad Barnech,
  • Carolina Oliveira-Rizzo,
  • Pablo Smircich,
  • José Roberto Sotelo-Silveira and
  • María Ana Duhagon

Trypanosomatids are protozoan parasites that cause devastating vector-borne human diseases. Gene expression regulation of these organisms depends on post-transcriptional control in responding to diverse environments while going through multiple devel...

  • Commentary
  • Open Access
5 Citations
3,754 Views
12 Pages

The cardiopulmonary system delivers oxygen throughout the body via blood circulation. It is an essential part of the body to sustain the lives of organisms. The integral parts of the cardiopulmonary system—the heart and lungs—are constant...

  • Article
  • Open Access
7 Citations
3,984 Views
19 Pages

The Interplay of NEAT1 and miR-339-5p Influences on Mesangial Gene Expression and Function in Various Diabetic-Associated Injury Models

  • Simone Reichelt-Wurm,
  • Matthias Pregler,
  • Tobias Wirtz,
  • Markus Kretz,
  • Kathrin Holler,
  • Bernhard Banas and
  • Miriam C. Banas

Mesangial cells (MCs), substantial cells for architecture and function of the glomerular tuft, take a key role in progression of diabetic kidney disease (DKD). Despite long standing researches and the need for novel therapies, the underlying regulato...

  • Article
  • Open Access
3 Citations
4,408 Views
27 Pages

Human THAP9, which encodes a domesticated transposase of unknown function, and lncRNA THAP9-AS1 (THAP9-antisense1) are arranged head-to-head on opposite DNA strands, forming a sense and antisense gene pair. We predict that there is a bidirectional pr...

  • Review
  • Open Access
8 Citations
3,517 Views
14 Pages

Circular RNAs Activity in the Leukemic Bone Marrow Microenvironment

  • Francesca Liccardo,
  • Alessia Iaiza,
  • Martyna Śniegocka,
  • Silvia Masciarelli and
  • Francesco Fazi

Acute myeloid leukemia (AML) is a hematological malignancy originating from defective hematopoietic stem cells in the bone marrow. In spite of the recent approval of several molecular targeted therapies for AML treatment, disease recurrence remains a...

  • Article
  • Open Access
5 Citations
4,422 Views
15 Pages

The G3BP1-UPF1-Associated Long Non-Coding RNA CALA Regulates RNA Turnover in the Cytoplasm

  • Luisa Kirchhof,
  • Youssef Fouani,
  • Andrea Knau,
  • Galip S. Aslan,
  • Andreas W. Heumüller,
  • Ilka Wittig,
  • Michaela Müller-McNicoll,
  • Stefanie Dimmeler and
  • Nicolas Jaé

Besides transcription, RNA decay accounts for a large proportion of regulated gene expression and is paramount for cellular functions. Classical RNA surveillance pathways, like nonsense-mediated decay (NMD), are also implicated in the turnover of non...

  • Commentary
  • Open Access
3 Citations
2,901 Views
10 Pages

It is now well-established that microRNA dysregulation is a hallmark of human diseases, and that aberrant expression of miRNA is not randomly associated with human pathologies but plays a causal role in the pathological process. Investigations of the...

  • Article
  • Open Access
17 Citations
3,949 Views
16 Pages

The Profile of Circulating Blood microRNAs in Outpatients with Vulnerable and Stable Atherosclerotic Plaques: Associations with Cardiovascular Risks

  • Andrey N. Rozhkov,
  • Dmitry Yu. Shchekochikhin,
  • Yaroslav I. Ashikhmin,
  • Yulia O. Mitina,
  • Veronika V. Evgrafova,
  • Andrey V. Zhelankin,
  • Daria G. Gognieva,
  • Anna S. Akselrod and
  • Philippe Yu. Kopylov

Non-coding RNAs reflect many biological processes in the human body, including athero-sclerosis. In a cardiology outpatient department cohort (N = 83), we aimed to compare the levels of circulating microRNAs in groups with vulnerable plaques (N = 22)...

  • Article
  • Open Access
4 Citations
3,936 Views
14 Pages

Staphylococcus aureus Small RNAs Possess Dephospho-CoA 5′-Caps, but No CoAlation Marks

  • Christian Löcherer,
  • Nadja Bühler,
  • Pascal Lafrenz and
  • Andres Jäschke

Novel features of coenzyme A (CoA) and its precursor, 3′-dephospho-CoA (dpCoA), recently became evident. dpCoA was found to attach to 5′-ends of small ribonucleic acids (dpCoA-RNAs) in two bacterial species (Escherichia coli and Streptomy...

  • Article
  • Open Access
3 Citations
3,259 Views
17 Pages

MiRNAs have been shown to play a powerful regulatory role in the progression of serious diseases, including cancer, Alzheimer’s, and others, raising the possibility of new miRNA-based therapies for these conditions. Current experimental methods...

  • Article
  • Open Access
13 Citations
4,059 Views
17 Pages

Triple negative breast cancer (TNBC) represents a diverse group of cancers based on their gene expression profiles. While the current mRNA-based classification of TNBC has contributed to our understanding of the heterogeneity of this disease, whether...

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Non-Coding RNA - ISSN 2311-553X