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Metabolites, Volume 10, Issue 2

February 2020 - 38 articles

Cover Story: We discussed all-inclusive barriers in a metabolomics study at clinical and epidemiological scale to demonstrate the need for standardized biobanks, quality assurance and quality control (QA/QC) standards, sample handling, and statistical modeling. The involvement of machine learning in every step of a metabolomics study was highlighted. Ultimately, we proposed a comprehensive, adaptive omics workflow along with a proper checklist in reference to STROBE, TRIPOD, and QUADOMICs guidelines as well as our self-developed assessment to fully extend the potential of metabolomics in clinical sciences. Finally, the need to innovate multi-omics integration with metabolomics as a pillar was raised. View this paper.
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Articles (38)

  • Article
  • Open Access
1 Citations
4,341 Views
11 Pages

Metabolic Changes in Synaptosomes in an Animal Model of Schizophrenia Revealed by 1H and 1H,13C NMR Spectroscopy

  • Brian R. Barnett,
  • Fariba Fathi,
  • Paulo Falco Cobra,
  • Sue Y. Yi,
  • Jacqueline M. Anderson,
  • Hamid R. Eghbalnia,
  • John L. Markley and
  • John-Paul J. Yu

23 February 2020

Synaptosomes are isolated nerve terminals that contain synaptic components, including neurotransmitters, metabolites, adhesion/fusion proteins, and nerve terminal receptors. The essential role of synaptosomes in neurotransmission has stimulated keen...

  • Article
  • Open Access
2 Citations
3,063 Views
11 Pages

Chronic Influence of Inspiratory Muscle Training at Different Intensities on the Serum Metabolome

  • Camila A. Sakaguchi,
  • David C. Nieman,
  • Etore F. Signini,
  • Raphael M. de Abreu,
  • Claudio D. Silva,
  • Patrícia Rehder-Santos,
  • Maria G. A. Carosio,
  • Roberta M. Maria,
  • Carla C. Dato and
  • Heloisa S. S. de Araújo
  • + 3 authors

21 February 2020

This study investigated the chronic effect of inspiratory muscle training (IMT) on the human serum metabolome in healthy male recreational cyclists. Using a randomized, parallel group design, twenty-eight participants were randomized to three IMT gro...

  • Article
  • Open Access
9 Citations
3,877 Views
9 Pages

LAMA-1: A Cerebroside Isolated from the Deep-Sea-Derived Fungus Penicillium chrysogenum

  • Samah O. Alshehri,
  • Rania T. Malatani,
  • Hanin A. Bogari,
  • Ahmad O. Noor,
  • Amany K. Ibrahim,
  • Sameh S. Elhady and
  • Reda F. A. Abdelhameed

20 February 2020

Chemical investigation of the ethyl acetate extract of Penicillium chrysogenum strain S003, a fungus isolated from Red Sea deep sediment, led to the isolation of a cerebroside molecular species LAMA (1) along with three other known compounds, ergoste...

  • Article
  • Open Access
4 Citations
3,535 Views
10 Pages

Independent and Opposite Associations Between Branched-Chain Amino Acids and Lysophosphatidylcholines With Incident Diabetes in Thais

  • La-or Chailurkit,
  • Nitchawat Paiyabhroma,
  • Piyamit Sritara,
  • Prin Vathesatogkit,
  • Sukit Yamwong,
  • Nisakron Thonmung and
  • Boonsong Ongphiphadhanakul

20 February 2020

Branched-chain amino acids (BCAAs) and lysophosphatidylcholines (LPCs) have been reported to be associated with diabetes. The purpose of the present study was to investigate the relative contributions of BCAAs and LPCs to the progression of prediabet...

  • Review
  • Open Access
38 Citations
7,059 Views
16 Pages

The Determinants of the Human Milk Metabolome and Its Role in Infant Health

  • Anna Ojo-Okunola,
  • Stefano Cacciatore,
  • Mark P. Nicol and
  • Elloise du Toit

20 February 2020

Human milk is needed for optimal growth as it satisfies both the nutritional and biological needs of an infant. The established relationship between breastfeeding and an infant’s health is attributable to the nutritional and non-nutritional, fu...

  • Article
  • Open Access
42 Citations
8,744 Views
20 Pages

Absolute Quantification of the Central Carbon Metabolome in Eight Commonly Applied Prokaryotic and Eukaryotic Model Systems

  • Lisa M. Røst,
  • Lilja Brekke Thorfinnsdottir,
  • Kanhaiya Kumar,
  • Katsuya Fuchino,
  • Ida Eide Langørgen,
  • Zdenka Bartosova,
  • Kåre Andre Kristiansen and
  • Per Bruheim

19 February 2020

Absolute quantification of intracellular metabolite pools is a prerequisite for modeling and in-depth biological interpretation of metabolomics data. It is the final step of an elaborate metabolomics workflow, with challenges associated with all step...

  • Review
  • Open Access
32 Citations
6,959 Views
20 Pages

17 February 2020

Biomarkers are a recent research target within biological factors of psychiatric disorders. There is growing evidence for deriving biomarkers within psychiatric disorders in serum or urine samples in humans, however, few studies have investigated thi...

  • Review
  • Open Access
10 Citations
5,369 Views
28 Pages

Nidulantes of Aspergillus (Formerly Emericella): A Treasure Trove of Chemical Diversity and Biological Activities

  • Najla Ali Alburae,
  • Afrah E. Mohammed,
  • Hajer Saeed Alorfi,
  • Adnan Jaman Turki,
  • Hani Zakaria Asfour,
  • Walied Mohamed Alarif and
  • Ahmed Abdel-Lateff

17 February 2020

The genus Emericella (Ascomycota) includes more than thirty species with worldwide distribution across many ecosystems. It is considered a rich source of diverse metabolites. The published classes of natural compounds that are discussed here are orga...

  • Article
  • Open Access
28 Citations
6,184 Views
12 Pages

16 February 2020

Determination of the ratio of reduced to oxidized glutathione is of profound clinical interest in assessing the oxidative status of tissues and body fluids. However, this ratio is not yet a routine clinical parameter due to the analytically challengi...

  • Article
  • Open Access
44 Citations
4,559 Views
13 Pages

1H NMR Based Metabolomics in Human Sepsis and Healthy Serum

  • Henna Jaurila,
  • Vesa Koivukangas,
  • Marjo Koskela,
  • Fiia Gäddnäs,
  • Sami Myllymaa,
  • Arja Kullaa,
  • Tuula Salo and
  • Tero I. Ala-Kokko

15 February 2020

Early diagnosis is essential but challenging in severe sepsis. Quantifying and comparing metabolite concentrations in serum has been suggested as a new diagnostic tool. Here we used proton nuclear magnetic resonance spectroscopy (1H NMR) based metabo...

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Metabolites - ISSN 2218-1989