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29 October 2026

22 Pages

Field Evaluation and QTL Mapping of Stem Rot Resistance in Cultivated Peanut and Wild-Derived Germplasm

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1
Department of Field Crops, Institute of Plant Sciences, Agricultural Research Organization, The Volcani Center, P.O. Box 15159, Rishon LeZion 7505101, Israel
2
Faculty of Agricultural, Food and Environmental Quality Sciences, The Hebrew University of Jerusalem, P.O. Box 12, Rehovot 7610001, Israel
3
Institute of Plant Breeding, Genetics and Genomics, University of Georgia, Athens, GA 30602, USA
4
Department of Horticulture, Institute of Plant Breeding, Genetics and Genomics, University of Georgia, Tifton, GA 31793, USA
This article belongs to the Section Crop Breeding and Genetics

Abstract

Stem rot, caused by Agroathelia rolfsii (syn. Sclerotium rolfsii), is a major soilborne disease of peanut (Arachis hypogaea L.). We evaluated wild-derived germplasm for field resistance and identified associated genomic regions. Twenty-eight genotypes, including Israeli cultivars, three wild-derived induced allotetraploids and their backcross derivatives, were evaluated under artificial field inoculation over two seasons. Disease level differed significantly among genotypes, with consistent rankings between seasons (r = 0.88). The induced allotetraploids and several derived lines showed significantly low disease levels, whereas most commercial cultivars developed severe disease. Stem rot reduced pod yield by 49% on average, and disease level was negatively correlated with yield (r = −0.63). Near-isogenic line-based analysis indicated that bunch-type architecture may reduce disease development. NIFA-R, derived from ValSten1 (A. valida × A. stenosperma), combined low disease levels with relatively high yield under inoculated and non-inoculated conditions. QTL mapping in a Hanoch × NIFA-R F2:3 population detected 18 significant trait–QTL associations for sickness grade, symptomatic plants and inoculation-center sickness grade, with a consistently supported shared association on chromosome 13. NIFA-R contributed the favorable allele at 16 of 18 significant QTL associations, although their specific ancestry remains unresolved. These results demonstrate the value of wild-derived resistance resources and identify preliminary QTL regions for further validation toward marker-assisted selection.

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