Search Results (1,339)

Neglected arboviruses dengue (DENV), Zika (ZIKV), yellow fever (YFV), Japanese encephalitis (JEV), and chikungunya collectively affect hundreds of millions of people annually, yet no specific antiviral drug has been approved for any of them. Alkaloids, nitrogen-containing specialized metabolites produced by diverse plant families, have emerged as a promising source of broad-spectrum antiviral scaffolds. This review compiles and critically analyzes over 100 alkaloid-virus pairs across several RNA virus families, providing a comparative mechanistic analysis. Lycorine, narciclasine, emetine, and berbamine, among others, exhibit potent activity against phylogenetically distant viruses, with the most potent activities reported against flaviviruses (narciclasine: EC₅₀ 0.02 µM against DENV, ZIKV, YFV, and JEV; pancratistatine: 0.0063 µM against ZIKV). Structure-activity analysis of multiple alkaloid classes identifies key pharmacophoric features, including the phenanthridine nucleus (lycorine derivatives) and the bis-benzylisoquinoline scaffold (tetrandrine, berbamine), as determinants of antiviral potency, selectivity, and broad-spectrum activity. Genetic resistance data in West Nile virus challenge the widely accepted model of lycorine as a direct nucleoside inhibitor, instead pointing toward the involvement of the membrane-associated NS4A-2K-NS4B replication complex, though direct validation remains limited for other flaviviruses. Converging structural, biochemical, and transcriptomic evidence suggests that ribosome-mediated translational stress may represent an additional host-directed antiviral mechanism for isoquinoline-type alkaloids, though the causal chain from ribosome binding to activation of the integrated stress response and to antiviral effect has not been established. The present analysis highlights that in vivo validation remains limited to a few alkaloid-virus pairs. Unbiased target deconvolution and formal testing of the ribosome/integrated stress response hypothesis stand out as essential research priorities. Full article

The fall armyworm (FAW), Spodoptera frugiperda, is a highly polyphagous pest that has rapidly expanded across Africa, Asia, and Oceania, threatening food security and agricultural productivity. Reliance on synthetic insecticides for FAW management is increasingly challenged by insecticide resistance, environmental contamination, and adverse effects on non-target organisms and human health. This review synthesizes current knowledge on the potential of endophytic fungi as a sustainable strategy for FAW management. Following a systematic literature search, 59 original research articles published over the past 41 years were evaluated. These studies investigated 44 fungal species across 37 host crops, with Zea mays representing the most extensively studied system. The fungal species most frequently assessed were Beauveria bassiana, Metarhizium anisopliae sensu lato (s.l.), and Epichloe coenophialum. Overall, several fungal species successfully colonized plant tissues and reduced FAW performance through increased larval mortality, delayed development, and reduced feeding. These effects were associated with the production of bioactive secondary metabolites, induction of plant defense responses, and alteration of volatile organic compound emissions. Despite these promising findings, important knowledge gaps remain. Studies assessing effects on non-target organisms and natural enemies are scarce, and field validation remains limited. Research efforts are also geographically biased, with relatively few studies conducted in Africa despite the continent experiencing some of the highest FAW-related losses. Future research should prioritize field evaluations, multitrophic interaction studies, investigations in underrepresented regions, and socio-economic analyses to support farmer adoption. Addressing these gaps will be critical for determining the practical role of endophytic fungi in sustainable FAW management. Full article

Medicinal plants are important sources of secondary metabolites (SMs), but their production is constrained by resource shortages, low cultivation efficiency, and continuous cropping obstacles. As the “second genome” of host plants, the plant microbiome is deeply involved in plant growth and development, stress adaptation, and the accumulation of bioactive compounds, providing new pathways for the sustainable utilization of traditional Chinese medicine resources. This review summarizes the mechanisms by which the plant microbiome regulates biomass formation and SM accumulation in medicinal plants. Microorganisms can promote plant nutrient acquisition, enhance resistance to biotic and abiotic stresses, and regulate root architecture and hormonal signaling. Meanwhile, microorganisms can also participate in the remodeling of secondary metabolic networks in medicinal plants through elicitor- and effector protein-mediated signal transduction, regulation of metabolic gene expression, redistribution of photosynthetic carbon sources and metabolic precursors, and their own biosynthetic capacities. From the perspective of co-evolution, plants and their microbiomes constitute symbiotic systems formed through long-term interactions. Plants can selectively recruit specific microbial taxa through root exudates, SMs, and signaling molecules, whereas microorganisms influence plant adaptability and medicinal material quality through colonization, metabolic feedback, and horizontal gene transfer. This review proposes that a synergistic regulatory pattern of “close phylogenetic relatedness-similar secretions-similar microbial communities” may exist between medicinal plants and microorganisms. This pattern suggests that closely related medicinal plants may share similar core microbial taxa, which may help reveal the intrinsic mechanisms underlying specific microbial recruitment and the quality formation of geo-authentic medicinal materials. Furthermore, the design of synthetic microbial communities (SynComs) can be achieved based on the identification of shared functional genes and the screening of indigenous core functional strains. Full article

Trichoderma species are widely investigated and commercially applied as eco-friendly biocontrol agents in sustainable agriculture. These filamentous fungi protect plants through multiple complementary mechanisms, including mycoparasitism, antibiosis, competition for nutrients and ecological niches, and induction of systemic resistance in host plants. These activities are mediated by a diverse array of secondary metabolites, hydrolytic enzymes, and signaling pathways that collectively suppress pathogens and enhance plant health. Beyond disease control, selected Trichoderma strains promote plant growth by improving nutrient acquisition, modulating phytohormone signaling, and increasing tolerance to abiotic stresses. This review summarizes recent advances in the mechanisms underlying Trichoderma spp. mediated biocontrol, with particular emphasis on secondary metabolites, formulation strategies, commercialization, and field applications. Commercial products are available in various formulations, including wettable powders, granules, and liquid preparations, and have demonstrated efficacy against several economically important plant diseases under field conditions. However, their performance remains highly dependent on strain characteristics, host species, environmental conditions and agricultural practices, resulting in inconsistent efficacy across agroecosystems. Recent progress in genomics, transcriptomics, and metabolomics has substantially improved our understanding of Trichoderma–plant–pathogen interactions and revealed considerable strain-specific variation in biocontrol and plant growth-promoting traits. Future research should prioritize strain-specific optimization, formulation stability, microbiome-informed applications, and improved field predictability. Overall, Trichoderma spp. Represents a valuable component of integrated disease management, offering an effective and sustainable alternative to synthetic pesticides. Full article

Ecological control studies of the Asian longhorned beetle (Anoplophora glabripennis) distinguish susceptible, resistant, and dead-end trap trees as functionally different plant categories. We used shotgun metagenomics to examine bacterial and archaeal profiles detected in adult gut samples after 72 h exposure to three dietary plants or prolonged water-only starvation. The study included 24 metagenomes, with three biological replicates per DietGroup × SexGroup combination. No time-zero gut samples were available, so the observed patterns remain superimposed on the beetles’ field history. The retained catalogue contained 152,895 bacterial genes and 9 archaeal genes. The original observed-richness difference was strongly correlated with host-depleted read depth and was not supported after common-depth rarefaction. Genus-level Bray–Curtis analysis detected a DietGroup × SexGroup interaction that persisted after depth adjustment and exclusion of low-yield samples. This interaction was exploratory because of the small within-cell sample size. Raw Bray–Curtis analysis of KEGG Orthology profiles showed a DietGroup association, but this association was not robust to direct-depth adjustment or Aitchison analysis. CAZy profiles were descriptive and showed no significant DietGroup effect. These results indicate short-term, depth-sensitive associations between dietary treatment and gut-sample bacterial and archaeal profiles. They do not establish resident status, microbial activity, or a physiological mechanism. Full article

Chalcones are naturally occurring open-chain flavonoids widely distributed in plants and recognized for their broad spectrum of pharmacological activities. Their versatile scaffold allows for extensive structural modifications, leading to a diverse range of natural and synthetic derivatives with notable biological potential. In the context of viral infections, chalcones have demonstrated remarkable efficacy against a variety of human pathogens, including dengue virus, HIV, HCV, influenza A, SARS-CoV-2, and other emerging viruses. Beyond human health, several chalcones have shown potent activity against plant viruses such as tobacco mosaic virus (TMV) and cucumber mosaic virus (CMV), and animal viruses including porcine reproductive and respiratory syndrome virus (PRRSV) and mammalian reovirus (MRV), underscoring their broad antiviral spectrum. These compounds act through multiple mechanisms, including the inhibition of viral enzymes (e.g., proteases, polymerases, and integrases), interference with viral entry and replication, and the modulation of host-related pathways. Recent advances in molecular docking, structure–activity relationship (SAR) studies, and synthetic optimization have further highlighted chalcones as a promising scaffold for antiviral drug discovery. Accordingly, this review summarizes and categorizes antiviral chalcones reported over the last two decades, emphasizing and critically discussing their molecular targets, mechanisms of action, and pharmacological potential as lead compounds. It also provides a comparative perspective on their pharmacological relevance by correlating their activities against standard therapeutic agents and reference inhibitors. Furthermore, the most recurrent viral targets were critically discussed regarding their conservation, expected genetic barriers to resistance, and the global SAR trends identified for the corresponding antiviral chalcones. Finally, in silico ADMET profiling of the most promising naturally occurring chalcones was performed to evaluate their drug-likeness and pharmacokinetic properties, offering guidance for future structural optimization and translational development. Collectively, these findings highlight the chalcone scaffold as a versatile platform for the development of novel antiviral agents targeting diverse viral and host pathways. Full article

Ganoderma lucidum polysaccharide (GLP) exhibits prominent antibacterial and antioxidant activities. This study evaluated the effects of GLP seed soaking at two concentrations (4 g/100 kg, GLP4; 8 g/100 kg, GLP8) on wheat growth promotion and induced resistance against wheat sharp eyespot caused by Rhizoctonia solani and Fusarium head blight (FHB) mainly caused by Fusarium graminearum. Physiological and agronomic analyses showed that GLP treatment increased the germination rate of all tested wheat cultivars (moderately resistant: Xiaoyan 22, Sumai 3; moderately susceptible: Mingxian 169, Xinong 873) by over 2%. Moderately susceptible and resistant cultivars presented average plant height increases of 0.5 cm and 2 cm, respectively, with most cultivars showing a height increase of approximately 3 cm. GLP significantly elevated leaf chlorophyll content by over 5% and differentially regulated malondialdehyde (MDA) levels: MDA decreased by 34–68% in Sumai 3 and Mingxian 169 but increased by 11–23% in Xiaoyan 22. Pot assays verified that GLP yielded over 10% control efficacy against both diseases. Overall, GLP seed soaking effectively promotes wheat growth, activates defense responses, and enhances host resistance to R. solani and F. graminearum infections. Full article

Sunflower (Helianthus annuus) is highly susceptible to infection by the root parasitic plant Orobanche cumana during its growth. In establishing connections with the sunflower root system, O. cumana induces the hydrolysis and remodeling of the host cell wall. Xyloglucan endotransglucosylase/hydrolase (XTH), a member of glycoside hydrolase family 16 (GH16), is a key enzyme involved in the hydrolysis and synthesis of xyloglucan, playing a critical role in cell wall modification and reconstruction. However, the involvement of XTH families in the interaction between sunflower and O. cumana remains unclear. In this study, we showed that the expression level of HaXTH2 was upregulated in sunflowers following O. cumana infection. Overexpression of HaXTH2 loosens host primary cell walls and represses lignin-based defense responses at the early infection stage, thereby facilitating haustorial penetration across cortical tissues and xylem bridge formation to support normal parasitism of O. cumana. Functional analysis revealed that HaXTH2 and its homolog, HaXTH2-1, facilitate O. cumana infection, whereas OcXTH2, an O. cumana homolog, suppresses this process. Furthermore, HaXTH2, HaXTH2-1, and OcXTH2 are localized to the cell wall. Domain truncation analysis revealed that the GH16 domain alone from HaXTH2 and HaXTH2-1 enhance parasitic susceptibility, while the xyloglucan endotransglycosylase C-terminal domain (XET_C) domain does not. Mutation analysis identified Y20 in HaXTH2 and H96 in HaXTH2-1 as key amino acid sites regulating O. cumana parasitism. This study expands our understanding of the functions of XTHs in plant–plant interactions and provides a theoretical basis for further development of O. cumana-resistant sunflower cultivars. Full article

Paraphoma radicina is a newly reported pathogen causing alfalfa Paraphoma root rot (APRR). Although alfalfa cultivars with different resistance levels to P. radicina have been identified, the field occurrence of APRR and the host responses associated with resistance remain unclear. This study investigated APRR occurrence and its effect on alfalfa biomass, the histological, physiological, and biochemical responses in roots of resistant and susceptible cultivars after P. radicina infection, and the effect of root exudates from different cultivars on P. radicina growth. Field investigations showed that APRR occurrence tended to be higher in older stands and was associated with reduced alfalfa biomass during spring. Inoculation with P. radicina caused a greater reduction in plant growth and dry weight in the susceptible cultivar than in the resistant cultivar. Histological observations revealed severe phloem cell damage, as well as protoplast shrinkage and detachment from the cell wall in cambial cells of the susceptible cultivar at 49 dpi. Infection also caused significant changes in photosynthetic and chlorophyll fluorescence parameters in the susceptible cultivar. The activities of defense enzymes were increased after infection, especially in the resistant cultivar. Root exudates from the resistant cultivar more effectively inhibited P. radicina growth. These findings suggest that the resistant alfalfa cultivar enhances APRR resistance through physiological and biochemical defense responses and root exudate suppression of P. radicina growth. Full article

Bacteria play a vital role in enhancing host resistance to salt–alkali stress. However, the composition and structure of bacterial communities associated with halophytes under natural high salt–alkali conditions remain poorly understood. Here, a transect comprising six sampling points (0, 9, 18, 27, 36, and 45 m) was established across a natural population of Salicornia europaea L. in Guhya Salt Lake salt–alkali soils. At each sampling site, bulk soil, rhizosphere soil, root, and leaf samples were collected for 16S rRNA gene amplicon sequencing. The pH and soil electrical conductivity (EC) significantly increased along the sampling sites establishing a distinct salt–alkali gradient. This gradient provides an ideal model for studying the ecological adaptation mechanisms of halophytes and their related microorganisms. The results showed that alpha diversity (Shannon index) of bacterial communities significantly decreased across sampling sites in bulk soil, rhizosphere soil and root, but not in leaf. Beta diversity varied significantly across sampling points in all sample types examined. Linear Discriminant Analysis Effect Size (LEfSe) identified specific microbial biomarkers (such as Halomonas spp.) for each sampling point and sample type, many of which are known salt–alkali-tolerant lineages. Random forest and correlation analysis indicated that soil chemical properties had a clear impact on these identified biomarkers. Overall, salt–alkali gradient was associated with habitat-specific microbial communities across plant compartments and certain bacterial taxa were found to be enriched in specific niches. These taxa include known salt–alkali-tolerant lineages, and may putatively contribute to host adaptation to extreme environments, which provides deeper insights into plant–microbe interactions in natural ecosystems and offers potential microbial resources for improving crop salt–alkali tolerance. Full article

Cancer continues to be a primary cause of death globally, necessitating the constant development of effective and less toxic therapeutics. Cucurbitacins belong to the tetracyclic triterpenoids found mainly in the Cucurbitaceae family. Cucurbitaceae plants exert various biological activities such as anti-diabetic, anti-cancer and anti-inflammatory properties, which make them beneficial in addressing metabolic disorders. This review focuses on cucurbitacins namely A, B, C, D, E, I, IIa, which have been explored in cancer research. Cucurbitacins suppress tumor progression by activating cell death pathways, including apoptosis, autophagy, pyroptosis and ferroptosis. They are known to target multiple crucial biomolecular key players, such as STAT3, AKT, mTOR, ERK, EGFR and TLR4. Additionally, they disrupt cytoskeletal proteins and inhibit cell proliferation, invasion, migration, angiogenesis, and cell-cycle arrest. Cucurbitacins have been demonstrated to modulate tumor microenvironment, leading to enhanced host immune surveillance that reverses traditional therapy resistance from cisplatin, doxorubicin, and paclitaxel. In this review, we highlight the strong potential of cucurbitacins as anti-cancer agents, either as monotherapy or in combination, for the development of safer, cost-effective drugs with improved patient treatment outcomes. Full article

MicroRNAs (miRNAs) are central regulators of gene expression and play pivotal roles in plant antiviral defense. In Cucurbitaceae, a globally important crop family including cucumber, melon, and watermelon, viral pathogens such as CGMMV, CMV, and ZYMV represent major constraints on productivity. However, the regulatory complexity of miRNA-mediated antiviral responses in these species remains incompletely understood. This review provides an integrated overview of recent advances in miRNA-guided antiviral immunity in Cucurbitaceae, highlighting the dynamic reprogramming of small RNA pathways upon viral infection. Conserved miRNA families act as key regulatory hubs, controlling development, hormone signaling, and defense responses, while viral suppressors interfere with RNA silencing machinery, reshaping host regulatory networks. Emerging evidence further reveals multilayered interactions between miRNAs and other non-coding RNAs, including lncRNAs and circRNAs, indicating complex cross-talk that fine-tunes antiviral responses in a species- and virus-specific manner. Importantly, miRNAs exhibit a dual role by contributing both to antiviral defense and to symptom development. Advances in artificial miRNAs and RNA-based technologies underscore their potential for engineering durable virus resistance. Overall, miRNA-centered regulatory networks represent a promising target for next-generation crop protection strategies in Cucurbitaceae. Full article

The global transition toward plant-based diets has driven the inclusion and legumes as primary sources of proteins and micronutrients. However, the raw whole seed hosts complex matrices of antinutritional factors and crystalline starch arrangements that limit proteolytic digestibility, chelate essential minerals, and induce accelerated postprandial glycemic responses. Conventional culinary and thermal treatments applied in isolation are frequently insufficient to disrupt the physicochemical matrix of the seeds, leaving critical gaps regarding how to sustainably optimize mineral bioaccessibility and convert water-soluble starches into stable slowly digestible fractions. This scoping review synthesizes analytical evidence demonstrating that targeted fermentative bioprocessing acts as a microstructural modulator. However, these biochemical outcomes are not unidirectional; the expansion of nutritional value is strictly governed by a complex interplay of substrate properties, process moisture, pH adjustments, and thermal pretreatments in plant defense frameworks and spatially reorganizing starch polymers. Microbial organic acid production and the mechanical penetration of fungal hyphae promote a 90–100% degradation and elimination of phytates and condensed tannins, eliminating non-digestible galacto-oligosaccharides and inactivating trypsin inhibitors. These mechanisms optimize phytate-to-mineral molar ratios, doubling the bioaccessibility of iron, zinc, and calcium in the digestive aqueous phases, while microbial beta-glucosidase expression bioconverts conjugated glycosides into free aglycones with high antioxidant activity. Simultaneously, the induction of molecular retrogradation drives continuous increases in the resistant starch fraction, inducing significant reductions in the hydrolysis index and lowering the predictive glycemic index to low thresholds. These findings consolidate controlled fermentation as a viable biotechnological intervention, providing structural guidelines for the rational design of functional foods, biofortified baked goods, and vegan beverages with high digestive tolerance. Full article

Plant-pathogenic bacteria threaten crop productivity and quality, yet chemical options remain limited compared with those for fungal and oomycete diseases. Current management relies mainly on copper bactericides, limited antibiotics, induced-resistance agents, biocontrol and resistant cultivars. However, copper and streptomycin resistance, efflux-mediated multidrug tolerance and rapid pathogen adaptation have weakened these strategies. Target-oriented research provides a framework for exploring agricultural antibacterials, anti-virulence agents, anti-colonization strategies, resistance sensitizers and host-resistance interventions, but many of these approaches remain conceptual, model-system, greenhouse or medical-bacteriology-derived rather than proven field solutions. This review classifies bacterial control targets into two interconnected groups: growth-essential targets, including peptidoglycan biosynthesis, membrane/envelope systems, nucleic-acid processes, protein synthesis, metabolism, nutrient transport and cell division; and anti-virulence/anti-adaptation targets, including secretion systems, quorum sensing, biofilms, motility, adhesion, cell-wall-degrading enzymes, tolerance systems, oxidative-stress responses and host susceptibility factors. Using “Candidatus Liberibacter asiaticus” (CLas) as a case study, genome annotation and infection-stage transcript-abundance data prioritized Sec-dependent secretion, outer-membrane/surface proteins, Bam assembly, nutrient transporters, Clp proteostasis, redox adaptation and core cellular processes as candidate target classes. Envelope-associated, secretion/anti-virulence, nutrient-acquisition and stress-sensitization modules may represent potential directions for downstream validation, but CLas candidates remain hypothesis-generating priorities requiring validation for essentiality, conservation, druggability, delivery feasibility, crop safety and field performance. Full article

Algerian fermented foods represent a precious source of indigenous yeasts with potentially probiotic properties, which can serve as regional, functional starter cultures. The aim of the present research is to isolate and genetically identify strains obtained from traditional fermented foods and investigate their probiotic properties and safety aspects in vitro. The molecular identification revealed fifteen S. cerevisiae strains obtained from sourdoughs and marinated peppers samples. All tested strains showed the ability to grow at 37 °C and to survive well at 0.3% (w/v) bile salts with high resistance to pH 2.5. The auto-aggregation rates of tested strains reached 93.90% after 24 h of incubation, while seven of fifteen strains showed high hydrophobicity values in xylene (44.60–58.90%), indicating their ability to survive and to adhere to the host intestinal mucosa. All S. cerevisiae isolates showed a good antioxidant activity and exhibited varying levels of antibacterial activity, but not against Listeria innocua. A lack of hemolysis, gelatinase, protease and phospholipase was recorded for all tested strains, while a strong phytase activity was observed in these strains, which may enhance mineral availability and reduce antinutritional effects of plant-based food. Based on these results, five S. cerevisiae strains showed promising probiotic properties and safety aspects, which can be used as potential probiotic strains in functional food industries and/or in the medical field. Full article