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Microbiology Research, Volume 16, Issue 10

October 2025 - 14 articles

Cover Story: Botrytis cinerea is a major threat to grapevine production, yet its natural populations in Morocco remain poorly understood. This study provides the first integrative characterization of 82 isolates from key vineyards, revealing significant phenotypic, physiological, and genetic diversity. Through combined analyses of phenotypic profiles, growth rate, virulence, transposable elements, mating types, and phylogenetic relationships, the study highlights the high variability and adaptive potential of B. cinerea. These findings enhance our understanding of gray mold epidemiology and offer a valuable foundation for developing sustainable, region-specific disease management strategies in viticulture. View the paper

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Article

549 Views

18 Pages

Altitudinal Gradient Drives Rhizosphere Microbial Structure and Functional Potential in Prickly Pear Cactus (Opuntia ficus-indica L.)

Lorena Jacqueline Gómez-Godínez,
José Luis Aguirre-Noyola,
Carlos Hugo Avendaño-Arrazate,
Sergio de los Santos-Villalobos,
Magali Ruiz-Rivas,
Ramón Ignacio Arteaga-Garibay and
José Martín Ruvalcaba-Gómez

Microbiol. Res.2025, 16(10), 213;https://doi.org/10.3390/microbiolres16100213

26 September 2025

The prickly pear cactus (Opuntia ficus-indica L.) is an emblematic crop for Mexico’s economy, gastronomy, and culture. Microbial communities play an important role in the health, development, and productivity of crops. This study used 16S rRNA...

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Article

448 Views

13 Pages

Phylogenetic Incongruence of Cyclic di-GMP-Activated Glycosyltransferase nfrB with 16S rRNA Gene Tree Reflects In Silico-Predicted Protein Structural Divergence in Diaphorobacter nitroreducens Isolated from Estero de Paco, Manila, Philippines

Ram Julius L. Marababol and
Windell L. Rivera

Microbiol. Res.2025, 16(10), 212;https://doi.org/10.3390/microbiolres16100212

26 September 2025

Diaphorobacter nitroreducens is a Gram-negative bacterium ubiquitously found in wastewater, recognized for its ecological adaptability and potential applications in environmental, biomedical, and industrial processes. Central to its adaptability is t...

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Article

552 Views

17 Pages

Bacillus Probiotic Strains Induce Gonadal Maturation and Sex Differentiation in Red Abalone Haliotis rufescens Using a Plant-Based Diet

Jorge Olmos,
Manuel Acosta-Ruiz,
Fabiola Lafarga-De la Cruz and
Jeremie Bauer

Microbiol. Res.2025, 16(10), 211;https://doi.org/10.3390/microbiolres16100211

24 September 2025

This study examined the effects of Bacillus probiotic strains on red abalone Haliotis rufescens reproductive performance. We supplemented plant- and fish-based feeds and compared them to fresh giant kelp Macrocystis pyrifera as a control diet. Over 1...

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Communication

871 Views

17 Pages

Gut Microbiome Analysis Reveals Core Microbiota Variation Among Allopatric Populations of the Commercially Important Euryhaline Cichlid Etroplus suratensis

Jilu Alphonsa Jose,
Anoop Alex and
Siby Philip

Microbiol. Res.2025, 16(10), 210;https://doi.org/10.3390/microbiolres16100210

23 September 2025

The gut microbiome plays a critical role in host physiology and adaptation, shaped by both intrinsic host factors and extrinsic environmental conditions. In this study, we investigated the influence of habitat type and geographical isolation on gut m...

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