Topic Editors

School of Landscape Architecture, Zhejiang Agriculture and Forestry University, Hangzhou 311300, China
Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China
Dr. Shiwei Zhong
School of Landscape Architecture, Zhejiang Agriculture and Forestry University, Hangzhou 311300, China

Genetic Breeding and Biotechnology of Garden Plants

Abstract submission deadline
30 September 2025
Manuscript submission deadline
30 December 2025
Viewed by
3687

Topic Information

Dear Colleagues,

The field of genetic breeding and biotechnology of garden plants is a vibrant arena where the techniques such as molecular marker-assisted selection, genomic editing, transgenic technologies, and tissue culture are harnessed to augment the desirable qualities of garden plants. Furthermore, this domain is dedicated to unraveling the intricate mechanisms governing plant growth and development, pinpointing genes that are pivotal to key traits like floral morphology, pigmentation, and plant architecture. The ultimate goal is to refine these attributes through breeding and biotechnology, elevating the esthetic and agronomic values of garden plants. It is with great enthusiasm that we introduce this Topic on "Genetic Breeding and Biotechnology of Garden Plants", designed to be a curated collection of the latest advancements in these domains. This Topic warmly welcomes the latest research results on molecular marker-assisted selection, genomic editing, and biotechnologies of garden plants, with the goal of advancing research in the field of genetic breeding and biotechnology of garden plants, as well as other related fields.

Potential topics include, but are not limited to, the following:

  • The role of regulation mechanisms in plant growth and development;
  • Flower color changes using transgenic technology;
  • Floral morphology and development using transgenic technology;
  • Gene function analysis using genomic editing;
  • Molecular marker-assisted selection in garden plants.

Dr. Bin Dong
Dr. Guirong Qiao
Dr. Shiwei Zhong
Topic Editors

Keywords

  • growth and development
  • transgenic technology
  • breeding
  • gene editing
  • tissue culture
  • molecular marker-assisted selection

Participating Journals

Journal Name Impact Factor CiteScore Launched Year First Decision (median) APC
Applied Biosciences
applbiosci
- - 2022 19.1 Days CHF 1000 Submit
Forests
forests
2.4 4.4 2010 16.2 Days CHF 2600 Submit
Genes
genes
2.8 5.2 2010 14.9 Days CHF 2600 Submit
Horticulturae
horticulturae
3.1 3.5 2015 16.9 Days CHF 2200 Submit
International Journal of Molecular Sciences
ijms
4.9 8.1 2000 16.8 Days CHF 2900 Submit
Plants
plants
4.0 6.5 2012 18.9 Days CHF 2700 Submit

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Published Papers (3 papers)

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13 pages, 5319 KiB  
Article
The Mining for Flowering-Related Genes Based on De Novo Transcriptome Sequencing in the Endangered Plant Phoebe chekiangensis
by Qinglin Sun, Yan Liu, Mingyang Ni, Yandong Song, Qi Yang, Junhong Zhang, Yuting Zhang and Zaikang Tong
Int. J. Mol. Sci. 2025, 26(3), 1000; https://doi.org/10.3390/ijms26031000 - 24 Jan 2025
Viewed by 694
Abstract
Phoebe chekiangensis is an indigenous, endangered, and valuable timber and garden tree species in China, which is notable for having a short juvenile phase (early flowering), unique among the Phoebe genus. However, the molecular mechanisms regulating the flowering of P. chekiangensis remain unexplored, [...] Read more.
Phoebe chekiangensis is an indigenous, endangered, and valuable timber and garden tree species in China, which is notable for having a short juvenile phase (early flowering), unique among the Phoebe genus. However, the molecular mechanisms regulating the flowering of P. chekiangensis remain unexplored, primarily due to the lack of transcriptomic or genomic data. In the present study, transcriptome sequencing yielded 53 million RNA reads, resulting in 111,250 unigenes after de novo assembly. Of these, 47,525 unigenes (42.72%) were successfully annotated in the non-redundant (Nr) database. Furthermore, 15,605 unigenes were assigned to Clusters of Orthologous Groups (KOGs), and 36,370 unigenes were classified into Gene Ontology (GO) categories. A total of 16,135 unigenes were mapped to the Kyoto Encyclopedia of Genes and Genomes (KEGG) database, involving 298 pathways. Based on the expression levels, Gibberellin signaling pathway-related genes were the most predominant expression levels. Hormonal analysis showed that gibberellin (GA) levels varied across tissues and flowering stages, as GA20 levels in leaves were low during full bloom, while GA1 and GA5 levels peaked in flowers. Furthermore, several key genes involved in gibberellin biosynthesis, including CPS, GID1, GA20ox, GA3ox, and GA2ox, exhibited stage-specific expression patterns. Certain genes were highly expressed during the initial phases of flowering, while others, like GA3ox and GA2ox, reached peak expression at full bloom. These findings provide valuable insights into the molecular mechanisms underlying flowering in P. chekiangensis, laying the foundation for future breeding efforts. This transcriptome dataset will serve as an important public resource for molecular research on this species, facilitating the discovery of functional genes related to its growth, development, and flowering regulation. Full article
(This article belongs to the Topic Genetic Breeding and Biotechnology of Garden Plants)
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12 pages, 1049 KiB  
Article
An Exploration of Candidate Korean Native Poaceae Plants for Breeding New Varieties as Garden Materials in the New Climate Regime Based on Existing Data
by Sang Heon Kim and Wonwoo Cho
Horticulturae 2024, 10(11), 1158; https://doi.org/10.3390/horticulturae10111158 - 31 Oct 2024
Viewed by 1131
Abstract
There is an increasing demand for low-maintenance public garden models, and environmental stress on plants due to climate change is growing. As a result, the demand for developing new plant varieties based on native species for use in gardens in response to climate [...] Read more.
There is an increasing demand for low-maintenance public garden models, and environmental stress on plants due to climate change is growing. As a result, the demand for developing new plant varieties based on native species for use in gardens in response to climate change has increased significantly. Many plants in the Poaceae family are applied for various purposes, including food crops, fodder grasses, ornamental plants, and medicinal plants. Additionally, native plants provide economic and ecological benefits, making them advantageous for use in gardens. However, there are some difficulties in Poaceae breeding studies and the utilization of wild native plants for breeding. Model plants can be utilized in breeding studies of Poaceae plant species. In this study, to identify Korean native Poaceae species with the potential for use not only as garden materials but also as model plants for breeding research in response to climate change, candidate species were selected from the Korean Plant Names Index (KPNI). A total of three Korean native plants in the Poaceae family, including Brachypodium sylvaticum, Setaria viridis, and Zoysia japonica, were selected, and their properties and genome information were compared with the existing representative model plants, Arabidopsis thaliana and Brachypodium distachyon. The current research status of B. sylvaticum, S. viridis, and Z. japonica has been summarized, and the genome size and other characteristics of these model plants have been compared and discussed. As a result, both A. thaliana (2n = 2x = 10) and B. distachyon (2n = 2x = 10) are annual C3 plants, but B. sylvaticum (2n = 2x = 18) is a perennial C3 plant, and S. viridis (2n = 2x = 18) is an annual C4 plant. Thus, B. sylvaticum and S. viridis can be utilized as model plants for perennial C3 plants and annual C4 plants, respectively. Z. japonica (2n = 4x = 40) is a perennial C4 plant, but it can be unsuitable as a model plant because it is an allotetraploid. The application of these newly selected candidate plants in breeding research can build a foundation for breeding native Poaceae plants in Korea in the new climate regime. Full article
(This article belongs to the Topic Genetic Breeding and Biotechnology of Garden Plants)
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15 pages, 5418 KiB  
Article
A Plasma Membrane Intrinsic Protein Gene OfPIP2 Involved in Promoting Petal Expansion and Drought Resistance in Osmanthus fragrans
by Xinke Lu, En Kong, Lixiao Shen, Yong Ye, Yiguang Wang, Bin Dong and Shiwei Zhong
Int. J. Mol. Sci. 2024, 25(19), 10716; https://doi.org/10.3390/ijms251910716 - 5 Oct 2024
Viewed by 1031
Abstract
Osmanthus fragrans, a native to China, is renowned as a highly popular gardening plant. However, this plant faces significant challenges from drought stress, which can adversely affect its flowering. In this study, we found that the plasma membrane-localized gene OfPIP2 exhibited a [...] Read more.
Osmanthus fragrans, a native to China, is renowned as a highly popular gardening plant. However, this plant faces significant challenges from drought stress, which can adversely affect its flowering. In this study, we found that the plasma membrane-localized gene OfPIP2 exhibited a substantial upregulation during the flowering stages and in response to drought stress. GUS staining has illustrated that the OfPIP2 promoter can drive GUS activity under drought conditions. The overexpression of OfPIP2 was found to enhance petal size by modulating epidermal cell dimensions in Petunia and tobacco. Moreover, this overexpression also bolstered drought tolerance, as evidenced by a reduction in stomatal aperture in both species. Furthermore, yeast one-hybrid (Y1H) and dual-luciferase (Dual-LUC) assays have indicated that the transcription factor OfMYB28 directly binds to the OfPIP2 promoter, thereby regulating its expression. Together, we speculated that a module of OfMYB28-OfPIP2 was not only involved in the enhancement of petal size but also conferred the improvement of drought tolerance in O. fragrans. These results contribute valuable insights into the molecular function of the OfPIP2 gene and lay a foundation for molecular breeding strategies in O. fragrans. Full article
(This article belongs to the Topic Genetic Breeding and Biotechnology of Garden Plants)
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