Search Results (216)

Dragon fruit (Hylocereus spp.) is an emerging crop in the tropics and subtropics, but its production is increasingly threatened by diseases that reduce yield and profitability. Early diagnosis of these diseases is crucial for timely intervention, yet visual symptoms often appear only after significant infection has occurred. The study aims to evaluate how optical spectral reflectance can detect dragon fruit diseases and identify the most responsive spectral regions. In this study, six major dragon fruit stem diseases: Neoscytalidium stem canker, stem sunburn, anthracnose, Botryosphaeria stem canker, Bipolaris stem rot, and bacterial soft rot were characterized by the goal of identifying unique spectral signatures for early detection and differentiation of each disease. Seventy-two potted dragon fruit plants of three distinct species were grown under four organic vermicompost treatments (0, 5, 10, 20 tons/acre) in both open-field and high-tunnel conditions together, in a randomized complete block design. A handheld spectroradiometer (350–2500 nm) was used to collect reflectance from the diseased and healthy cladodes (stem segment). Various spectral vegetative indices were computed to identify disease-specific features. The results revealed distinct spectral features for each disease. Infected cladodes consistently exhibited higher reflectance especially in the visible region (400–700 nm) and the near-infrared region (900–2500 nm) of the spectrum than healthy cladodes. The Normalized Difference Vegetative Index (NDVI), Green Normalized Difference Vegetative Index (GNDVI), and Spectral Ratio (SR) spectral indices were significantly higher in healthy plants than in diseased ones, reflecting higher chlorophyll concentration and plant biomass. Conversely, the 1110/810 ratio was lower in healthy plants than in diseased plants, suggesting a more compact internal plant structure. Statistical analysis revealed highly significant differences (p < 0.00001) between healthy and diseased spectra in the Red, Green and NIR regions. Linear Discriminant Analysis(LDA) achieved the highest classification accuracy (OA = 0.642, κ = 0.488), though performance was limited for minority classes. These findings demonstrate that targeted spectral sensing can identify dragon fruit diseases before obvious symptoms emerge. By pinpointing disease-specific spectral indices, our study paves the way for early-warning tools such as targeted multispectral sensors or drone-based imaging that would enable growers to intervene sooner and limit losses. These results highlight the potential for development of UAV-based or portable spectral sensors for large-scale, near real-time disease monitoring in dragon fruit production. Full article

Fusarium oxysporum-induced soft rot severely threatens postharvest pitaya quality and storage life, and while vanillin shows promise in the disease management, its mechanisms for controlling pitaya decay remain incompletely understood. In this study, we systematically investigated the molecular mechanism by which vanillin inhibits soft rot in postharvest pitaya, employing physiological and biochemical characterization, bioinformatics analysis, and molecular biology techniques. Compared with control fruit on 10 d, vanillin treatment significantly reduced disease index and lesion area by 27.12% and 67.43%, respectively. Meanwhile, vanillin treatment delayed the degradation of total soluble solids (TSSs) and titratable acidity (TA) and promoted the accumulation of total phenolics and flavonoids. Additionally, vanillin enhanced the activities of defense-related enzymes, such as catalase (CAT), superoxide dismutase (SOD), phenylalanine ammonia-lyase (PAL), β-1,3-glucanase (GLU), chitinase (CHI), peroxidase (POD) and polyphenol oxidase (PPO), and increased antioxidant capacity, as evidenced by increased DPPH radical scavenging capacity and ascorbic acid content. This resulted in reduced oxidative damage, as indicated by decreased levels of malondialdehyde (MDA), H₂O₂ and O₂^•−. Yeast one-hybrid (Y1H), dual-luciferase reporter (DLR) and subcellular localization revealed that HuTGA1, a nuclear-localized transcriptional activator, specifically bound to the as-1 cis-acting element and activated expression of HuNPR1 and HuNPR5-1. Transient overexpression of HuTGA1 reduced reactive oxygen species (ROS) accumulation and upregulated related genes. These findings suggest that vanillin treatment might enhance pitaya resistance by activating the HuTGA1-HuNPR signaling module, providing insights into the molecular mechanisms underlying vanillin-induced resistance. Full article

Patulin is a mycotoxin produced mainly by Penicillium expansum on apples. P. expansum is a fruit pathogen that can cause apple soft rot. However, much is unknown about the characteristics of P. expansum and influence of major environmental parameters on its patulin production and growth on apple puree agar media (APAM). In this study, we evaluated the influence of pH, temperature, and relative humidity (RH) on patulin production by P. expansum OM1 and its growth (colony diameter and mycelial dry weight) on APAM after isolation and identification of the patulin-producing fungal strain from an apple. The fungal isolate produced the largest quantity of patulin on APAM under 15 °C, pH 4.0, and RH 98%, while it had the highest growth rates on the same media under 25 °C, pH 4.0–6.0, and RH 98%. Our data demonstrated that three important physicochemical factors (pH, temperature, and RH) substantially influenced the patulin production by the fungal species and its growth on APAM. Moreover, our results revealed that patulin was not detected on APAM at 5 °C after 7 days of incubation and that a trace amount of patulin was produced by the fungal strain along with its slow growth on the same media at 5 °C after 14 days. It suggests that patulin contamination by P. expansum on apples could be controlled during postharvest storage below 5 °C. These findings could provide fundamental knowledge for development of efficient strategies to prevent the occurrence of apples contaminated with patulin produced by P. expansum on them during postharvest storage. Full article

Breeding for disease-resistant varieties is a sustainable solution to reduce substantial production losses caused by pathogenic infestations in Brassica vegetables, bypassing environmentally risky disease management practices. Host-resistant genetic mechanisms aid breeders to identify resistance loci and linked markers for the clubroot, Fusarium yellows, downy mildew, black rot, stem rot, soft rot, white rust, and turnip mosaic virus diseases in Brassica vegetables. Introgression of the resistance (R) genes by marker-assisted selection (MAS) breeding strategies allow the development of disease-resilient varieties. Brassica rapa clubroot-resistant genes (CRa, CRc, CRd, CRk, and Crr5) have been introgressed into Chinese cabbage, while CR genes (CRa, CRb, CRc, Crr1, Crr2, and Crr3) from B. rapa were also introgressed into B. oleracea. Beyond MAS, R genes can be precisely engineered by CRISPR-based technologies into precise and durable resistant varieties. The involvement of DNA methylation and histone modifications epigenetically regulate resistance mechanisms, often via ethylene/salicylic acid/jasmonic acid signaling pathways. DNA methylation mediates systemic acquired resistance by the differential expression of genes such as JAZ1, PR3, and NDR1. Future progress will depend on identifying epiQTLs and epi-markers linked to R genes. Epigenetic insights with genetic knowledge will facilitate breeding of biotic stress-resilient Brassica vegetables. This review synthesizes current molecular understanding of biotic stressors and provides future directions for disease resistance breeding of Brassica vegetable plants. Full article

Cabbage is an important vegetable crop worldwide. In Taiwan, during cabbage production, bacterial soft rot caused by Pectobacterium carotovorum subsp. carotovorum often leads to significant yield losses. Aligning with the Sustainable Development Goals, there is a high demand for sustainable disease control strategies. Silicates are considered to be effective elicitors in activating plant defense responses and are reported to improve resistance to certain plant diseases. Bacillus amyloliquefaciens PMB05 fermentation liquid has been shown to enhance plant immunity and control many bacterial diseases. The supplementation of silicates to the PMB05 fermentation liquid may further improve its efficacy to control bacterial soft rot in cabbage. This study evaluated the effects of sodium metasilicate and potassium silicate on PMB05-mediated plant immune responses and disease control. Initial assays confirmed that treatment with B. amyloliquefaciens PMB05 suspension significantly increased HrpN-triggered reactive oxygen species (ROS) generation and callose deposition; moreover, PMB05 treatment alone reduced bacterial soft rot severity by 39.7%. When combined with B. amyloliquefaceins PMB05 fermentation liquid, sodium metasilicate at 2000 μM further enhanced ROS generation and callose deposition by 100% and 133%, respectively, compared to the treatment of PMB05 alone (p < 0.05). In contrast, potassium silicate exhibited inconsistent effects on ROS production, with both 500 and 1000 µM concentrations significantly reducing ROS generation by 26% and 38%, respectively, while none of the tested concentrations affected callose deposition (p < 0.05). Lastly, disease severity assessments in cabbage inoculated with P. carotovorum subsp. carotovorum PCCSB1 revealed that B. amyloliquefaciens PMB05 fermentation liquid was able to reduce bacterial soft rot symptoms by 60.3%. Supplementation with 1500 and 2000 µM sodium metasilicate further decreased disease severity by 77.9% and 76.4%, respectively (p < 0.05). Although the supplementation of potassium silicate also significantly reduced disease severity compared to P. carotovorum subsp. carotovorum PCCSB1 alone, it was less effective than PMB05 fermentation alone. Overall, these results demonstrate that sodium metasilicate enhances the biocontrol activity of B. amyloliquefaciens PMB05 by further intensifying plant immune responses. This approach may broaden the large-scale use of B. amyloliquefaciens PMB05 fermentation liquid for sustainable soft rot management in cabbage, although the stability and cost-effectiveness of sodium metasilicate under field conditions still require validation. Full article

Two novel bacterial strains, designated S70^T and S69A, were isolated from a marine brittle star collected in the South China Sea. These strains are Gram-stain-negative, non-motile, aerobic, and rod-shaped. A phylogenomic analysis indicated that strains S70^T and S69A formed a distinct branch with Youngimonas vesicularis CC-AMW-E^T and Lutimaribacter litoralis JCM 17792^T. The DNA G+C content of both strains was 61.5%. The digital DNA–DNA hybridization values with the closest relatives were 21.8, and 21.2%, respectively. Furthermore, the average nucleotide identity (ANIb) values between strain S70^T and these two reference strains were 74.9% and 74.6%, respectively, both well below the 95–96% threshold for dividing prokaryotic species. The major fatty acids of strain S70^T were summed feature 8 (C_18:1 ω6c and/or C_18:1 ω7c). Functional genomic analysis revealed that strain S70^T possesses potential for hydrocarbon degradation and may play a significant role in sulfur metabolism. Additionally, strain S70^T exhibited broad-spectrum AHL-degrading activity and, most notably, significantly inhibited soft rot caused by Pectobacterium carotovorum in potato tuber assays. Genomic comparisons further support the reclassification of Lutimaribacter litoralis into the genus Youngimonas. Full article

Postharvest fungal diseases represent a major constraint to the storage, transport, and marketability of peach (Prunus persica) fruits. Pathogens such as Monilinia spp. (Brown rot), Penicillium expansum (Blue rot), Rhizopus stolonifera (Soft rot), Botrytis cinerea (Gray rot), and Geotrichum candidum (Acid rot) cause significant economic losses globally. Traditional control methods primarily rely on chemical fungicides, which are increasingly challenged by issues of resistance development, consumer health concerns, and regulatory restrictions. This review critically synthesizes the biology, infection mechanisms, and optimal environmental conditions of key fungal pathogens affecting postharvest peaches. It further evaluates the current landscape of chemical, physical, and biological control methods, emphasizing novel approaches including essential oils, microbial antagonists, induced resistance, and eco-friendly sanitizers. Comparative efficacy, sustainability, and practical implementation of these strategies are discussed. Integrated management approaches that combine multiple interventions under low-residue or residue-free systems are highlighted as the most promising direction. This review concludes that the future of peach postharvest protection lies in tailor-made, multi-faceted integrated programs that are both effective and environmentally sound. Full article

Postharvest diseases caused by various fungal pathogens pose a significant threat to fruit quality, storage, and market value, making their identification and biological characterization essential for effective management strategies. This study examines the morphological and phylogenetic characteristics of Alternaria, Botryosphaeria, Pestalotiopsis, and Trichothecium species associated with loquat fruit rot in Yunnan, China. In May 2023, fruit rot of loquat in Yunnan, China, was classified into four types: ring rot, brown spot, black spot, and soft rot, with incidence rates of 4%, 6%, 6%, and 12%, respectively. Based on morphological features and molecular approaches, two strains of Botryosphaeria were identified as Botryosphaeria dothidea, which causes ring rot. Three strains of Trichothecium were identified as Trichothecium roseum, which is responsible for the brown spots. Three strains of Alternaria were identified as Alternaria alternata, which led to the appearance of black spots on the leaves. Similarly, two strains of Pestalotiopsis were identified as Pestalotiopsis kenyana, which causes soft rot. All identified species were verified to induce harvest loquat fruit rot by validating Koch’s postulates. This is the novel report of B. dothidea, T. roseum, and P. kenyana inducing postharvest fruit rot on loquat in Yunnan, China, and globally. It is also the first evidence that A. alternata causes postharvest fruit rot and gray leaf spot on loquat in Yunnan, China. The virulence differed among species, even within isolates of the same species. Additionally, the effect of temperature on the pathogenicity of A. alternata on loquat leaves was more than humidity. These findings enhance our understanding of the fungal pathogens affecting loquat fruit in the study area and highlight the importance of effective management strategies to minimize fruit rot. Further research is needed to investigate the ecological impacts of these species and potential control measures in agricultural practices. Full article

Studies of microbial degradation of historic woods are essential to help protect and preserve these important cultural properties. The USS Cairo is a historic Civil War gunboat and one of the first steam-powered and ironclad ships used in the American Civil War. Built in 1861, the ship sank in the Yazoo River of Mississippi in 1862 after a mine detonated and tore a hole in the port bow. The ship remained on the river bottom and was gradually buried with sediments for over 98 years. After recovery of the ship, it remained exposed to the environment before the first roofed structure was completed in 1980, and it has been displayed under a tensile fabric canopy with open sides at the Vicksburg National Military Park in Vicksburg, Mississippi. Concerns over the long-term preservation of the ship initiated this investigation to document the current condition of the wooden timbers, identify the fungi that may be present, and determine the elemental composition resulting from past wood-preservative treatments. Micromorphological characteristics observed using scanning electron microscopy showed that many of the timbers were in advanced stages of degradation. Eroded secondary cell walls leaving a weak framework of middle lamella were commonly observed. Soft rot attack was prevalent, and evidence of white and brown rot degradation was found in some wood. DNA extraction and sequencing of the ITS region led to the identification of a large group of diverse fungi that were isolated from ship timbers. Soft rot fungi, including Alternaria, Chaetomium, Cladosporium, Curvularia, Xylaria and others, and white rot fungi, including Bjerkandera, Odontoefibula, Phanerodontia, Phlebiopsis, Trametes and others, were found. No brown rot fungi were isolated. Elemental analyses using induced coupled plasma spectroscopy revealed elevated levels of all elements as compared to sound modern types of wood. High concentrations of boron, copper, iron, lead, zinc and other elements were found, and viable fungi were isolated from this wood. Biodegradation issues are discussed to help long-term conservation efforts to preserve the historic ship for future generations. Full article

This study examines the impact of recent climatic trends on the preservation of submerged wooden structures at the Gran Carro archaeological site in Lake Bolsena, Italy. Climatic data from the Bolsena Meteorological Station were analysed alongside in situ water quality measurements collected near the archaeological remains at a depth of 4 m. The key parameters included water temperature (Tw), redox potential (Eh), dissolved oxygen (DO), and total dissolved solids (TDS). Trend analyses using the Mann–Kendall test and Sen’s slope revealed significant increases in air and water temperatures, which were strongly correlated. Although precipitation exhibited an upward trend, its negative correlation with temperature suggests greater variability rather than a stable water supply. Despite increased rainfall, lake levels showed a significant decline, likely due to intensified evaporation and water extraction for irrigation. UAV surveys confirmed recent lowering of the lake’s water surface during drought periods. Among the limnological parameters, dissolved oxygen saturation declined significantly, while redox potential increased, indicating shifts toward more anaerobic conditions. These environmental changes could promote the activity of erosive bacteria that degrade submerged wood. Conversely, increased evaporation might also enhance oxygen penetration at depth, potentially activating decay agents such as soft rot fungi and wood-boring bacteria. Overall, the findings suggest that ongoing climatic changes are adversely affecting the preservation of submerged wooden structures, highlighting the need for adaptive management strategies to protect both the lake ecosystem and its archaeological heritage. Full article

Diaporthe eres is a harmful pathogen affecting Hongyang kiwifruit (Actinidia chinensis) after harvest, yet the antioxidant defense strategies are not well understood. This research thoroughly examines the dynamics of the antioxidant response during the infection process. Significant findings indicate an initial 3-day latent period (0–3 dpi) that allowed for pathogen establishment, followed by irreversible tissue breakdown characterized by water-soaked lesions at 4 dpi. The study identified a biphasic activation pattern of superoxide dismutase (SOD) with dual activity peaks (1 dpi and 4 dpi), orchestrated by mitochondrial hub gene CEY00_Acc02790 that coordinates peroxidase (POD) networks, while peroxidase (POD) activity exhibited a synchronized but temporary increase, peaking at 4 dpi. Further bioinformatic analysis revealed the possible functional specialization of POD isoforms: α-helix-rich extracellular variants drove cell wall reinforcement through lignification, while random coil-dominant intracellular variants formed to mitigate cytoplasmic reactive oxygen species (ROS) damage, establishing dual physicochemical barriers. Malondialdehyde (MDA) levels rose significantly by 3 dpi, indicating permanent membrane damage. Collectively, these findings elucidate the mechanistic foundation of the Actinidia–Diaporthe pathosystem, identifying the bimodal SOD response and POD specialization as prime targets for developing resistant cultivars and precision postharvest interventions, ultimately reducing losses through biochemical interception of pathogenesis. Full article

Dickeya solani causes soft rot in potato (Solanum tuberosum L.) tubers. We used bulk RNA-seq to compare the early transcriptional responses of the diploid F₁ genotypes from the mapping population that varied in tuber resistance to D. solani. RNA was collected from wounded tubers inoculated with D. solani (B), wounded tubers treated with sterile water (W), and non-treated tubers (NT) at 8, 24, and 48 hours post-inoculation (hpi). The largest transcriptional divergence between resistant (R) and susceptible (S) genotypes occurred at 8 hpi, with R tubers showing stronger induction of phenylpropanoid biosynthesis, phenylalanine and tyrosine metabolism, amino sugar and nucleotide sugar metabolism, isoquinoline alkaloid biosynthesis, and glutathione metabolism. Phenylpropanoid biosynthesis was dominant in R tubers, in 17 differentially expressed genes (DEGs), consistent with rapid suberin and lignin deposition as a physical barrier. RT-qPCR of nine defence-related genes corroborated the RNA-seq trends. The suberisation-associated anionic peroxidase POPA was located within a QTL for D. solani resistance on chromosome II, supporting its role as a candidate for future functional studies. This is the first transcriptome-based comparison of R and S potato genotypes challenged with D. solani, providing candidate pathways and genes that may guide future molecular breeding once their roles are validated. Full article

Peaches are highly susceptible to rapid deterioration and bacterial infection during postharvest transportation and storage, leading to significant losses. In order to maintain peach fruit postharvest quality and extend its shelf life, it is critical to understand the physiological changes in postharvest fruit and implement effective postharvest technologies. This paper reviews the major postharvest physiological changes in peach fruit, including respiration, ethylene, hormones, texture, sugars, amino acids, phenolics, and volatiles, analyzes the major postharvest peach fruit diseases and their control techniques (covering brown rot, soft rot, and gray mold), and summarizes approaches to extend the storage life of peach fruit and maintain quality through physical, chemical, and biological preservation techniques. This review evaluates the advantages and disadvantages of postharvest peach fruit preservation techniques by analyzing postharvest physiological and nutritional quality, and suggests future research directions aimed at ensuring peach fruit safety and quality assurance. Full article

Carbohydrates are a primary nutrient for plant growth, and sugar transporter proteins play a crucial role in sugar allocation. In this study, hexose transporter genes encoding in the genome of colored calla lily ‘Jingcai Yangguang’ (Zantedeschia elliottiana cv. Jingcai Yangguang) were identified, and their expression patterns following infection by Pectobacterium carotovora subsp. Carotovora were investigated. Additionally, the transport characteristics of three hexose transporters, ZeSTP7, ZeSTP15, and ZeSTP17, were determined. The results showed that the sugar transporter protein family in Z. elliottiana comprises 18 members, most of which possess 12 transmembrane domains. Phylogenetic analysis revealed that the ZeSTP gene family was divided into five subgroups. Tandem gene duplication events were identified on the 16 chromosomes of Z. elliottiana, with multiple tandemly duplicated genes detected. Comparative analysis of synteny between species identified ZeSTP8 and OsSTP22 as homologous gene pairs, while OsSTP6 (OsMST6) was identified as a homologous gene pair with both ZeSTP14 and ZeSTP17. Following infection by P. carotovora subsp. carotovora, the transcript levels of ZeSTP7, ZeSTP15, and ZeST17 were all significantly elevated. Yeast mutant hexose complementation tests indicated that ZeSTP7 could transport glucose and galactose, whereas ZeSTP15 and ZeSTP17 exhibited limited transport capacity in this respect. This study provides a systematic identification and analysis of hexose transporter genes at the genome-wide level, highlighting the role of ZeSTP genes in the response of colored calla lily to soft rot and laying a theoretical foundation for further understanding the functions of sugar transporter genes. Full article