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Keywords = rumen-degradable protein

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21 pages, 719 KiB  
Article
Changes in Ruminal Dynamics and Microbial Populations Derived from Supplementation with a Protein Concentrate for Cattle with the Inclusion of Non-Conventional Feeding Sources
by Diana Sofía Torres-Velázquez, Daniel Francisco Ramos-Rosales, Manuel Murillo-Ortiz, Jesús Bernardo Páez-Lerma, Juan Antonio Rojas-Contreras, Karina Aide Araiza-Ponce and Damián Reyes-Jáquez
Fermentation 2025, 11(8), 438; https://doi.org/10.3390/fermentation11080438 - 30 Jul 2025
Viewed by 326
Abstract
Feed supplementation strategies are essential for optimizing cattle productivity, and the incorporation of non-conventional feed resources may reduce both production costs and environmental impact. This study evaluated the effects of pelletized protein concentrates (including Acacia farnesiana, A. schaffneri, and Agave duranguensis [...] Read more.
Feed supplementation strategies are essential for optimizing cattle productivity, and the incorporation of non-conventional feed resources may reduce both production costs and environmental impact. This study evaluated the effects of pelletized protein concentrates (including Acacia farnesiana, A. schaffneri, and Agave duranguensis bagasse) on rumen fermentation parameters, microbial communities, and gas emissions. Fistulated bullocks received the concentrate daily, and ruminal contents were collected and filtered before and after supplementation to assess in vitro gas and methane production, pH, and microbial composition using high-throughput sequencing of 16S rRNA and mcrA amplicons. In addition, in situ degradability was evaluated during and after the supplementation period. Supplementation led to a significant (p < 0.05) reduction in degradability parameters and methane production, along with a marked decrease in the abundance of Methanobrevibacter and an increase in succinate-producing taxa. These effects were attributed to the enhanced levels of non-fiber carbohydrates, hemicellulose, crude protein, and the presence of bioactive secondary metabolites and methanol. Rumen microbiota composition was consistent with previously described core communities, and mcrA-based sequencing proved to be a valuable tool for targeted methanogen detection. Overall, the inclusion of non-conventional ingredients in protein concentrates may improve ruminal fermentation efficiency and contribute to methane mitigation in ruminants, although further in vivo trials on a larger scale are recommended. Full article
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13 pages, 672 KiB  
Article
Exploratory Meta-Analysis of the Effect of Malic Acid or Malate Addition on Ruminal Parameters, Nutrient Digestibility, and Blood Characteristics of Cattle
by Leonardo Tombesi da Rocha, Tiago Antonio Del Valle, Fernando Reimann Skonieski, Stela Naetzold Pereira, Paola Selau de Oliveira, Francine Basso Facco and Julio Viégas
Animals 2025, 15(15), 2177; https://doi.org/10.3390/ani15152177 - 24 Jul 2025
Viewed by 192
Abstract
The aim of this study was to determine, through meta-analysis, the effects of malic acid/malate addition on ruminal and blood parameters and diet digestibility in cattle. The literature search was conducted in Web of Science, Science Direct, and Google Scholar using the terms [...] Read more.
The aim of this study was to determine, through meta-analysis, the effects of malic acid/malate addition on ruminal and blood parameters and diet digestibility in cattle. The literature search was conducted in Web of Science, Science Direct, and Google Scholar using the terms “organic acids”, “malic acid”, “malate”, and “bovine”. The database was composed of papers published between 1980 and 2023. The average effect of malate/malic acid inclusion was calculated using the “DerSimonian and Laird” random effects model. Meta-regression and subgroup analyses were conducted to explore sources of heterogeneity. Overall, malic acid (MAC) addition did not significantly affect rumen pH (ES = 0.310, p = 0.17), but subgroup analysis showed that malate increased pH (ES = 1.420, p < 0.01). MAC increased rumen propionate (ES = 0.560, p < 0.01) and total volatile fatty acids (VFAs; ES = 0.508, p = 0.03), while reducing the acetate-to-propionate ratio (p < 0.01). Starch and NDF intake were significant covariates affecting pH and VFA-related variables. MAC improved total-tract digestibility of dry matter (DM; ES = 0.547, p ≤ 0.05), crude protein (CP; ES = 0.422, p ≤ 0.05), and acid detergent fiber (ADF; ES = 0.635, p ≤ 0.05). It increased glucose levels (Overall ES = 0.170, p = 0.05) and reduced NEFA (Overall ES = −0.404, p = 0.03). In conclusion, the effectiveness of MAC depends on its chemical form. Improvements in rumen pH, fiber degradation, and blood parameters suggest more efficient energy use and potential metabolic benefits. The influence of diet-related covariates suggests that the response to MAC may vary depending on the nutritional composition of the diet. Full article
(This article belongs to the Special Issue Feed Additives in Animal Nutrition)
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23 pages, 8380 KiB  
Article
Characterizing the Fermentation of Oat Grass (Avena sativa L.) in the Rumen: Integrating Degradation Kinetics, Ultrastructural Examination with Scanning Electron Microscopy, Surface Enzymatic Activity, and Microbial Community Analysis
by Liepeng Zhong, Yujun Qiu, Mingrui Zhang, Shanchuan Wei, Shuiling Qiu, Zhiyi Ma, Mingming Gu, Benzhi Wang, Xinyue Zhang, Mingke Gu, Nanqi Shen and Qianfu Gan
Animals 2025, 15(14), 2049; https://doi.org/10.3390/ani15142049 - 11 Jul 2025
Viewed by 272
Abstract
The objective of this study is to investigate the degradation characteristics of oat grass in the rumen of Mindong goats and changes in microbial community attached to the grass surface. Four healthy male goats, aged 14 months, with permanent rumen fistula, in eastern [...] Read more.
The objective of this study is to investigate the degradation characteristics of oat grass in the rumen of Mindong goats and changes in microbial community attached to the grass surface. Four healthy male goats, aged 14 months, with permanent rumen fistula, in eastern Fujian, were selected as experimental animals. The rumen degradation rate of oat grass was measured at 4, 12, 24, 36, 48, and 72 h using the nylon bag method. Surface physical structure changes in oat grass were observed using scanning electron microscopy (SEM), cellulase activity was measured, and bacterial composition was analyzed using high-throughput 16S rRNA gene sequencing technology. The findings of this study indicate that oat grass had effective degradation rates (ED) of 47.94%, 48.69%, 38.41%, and 30.24% for dry matter (DM), crude protein (CP), neutral detergent fiber (NDF), and acidic detergent fiber (ADF), respectively. The SEM was used to investigate the degradation process of oat grass in the rumen. After 24 h, extensive degradation of non-lignified tissue was observed, resulting in the formation of cavities. At 36 h, significant shedding was observed, and by 72 h, only the epidermis and thick-walled tissue, which exhibited resistance to degradation, remained intact. Surface-attached microorganisms produced β-GC, EG, CBH, and NEX enzymes. The activity of these enzymes exhibited a significant increase between 4 and 12 h and showed a positive correlation with the degradation rate of nutrients. However, the extent of correlation varied. Prevotella and Treponema were identified as key genera involved in the degradation of roughage, with their abundance decreasing over time. Principle Coordinate Analysis (PCOA) revealed no significant differences in the rumen microbial structure across different time points. However, Non-Metric Multidimensional Scaling (NMDS) indicated a discernible diversity order among the samples. According to the Spearman correlation coefficient test, Ruminococcus, Fibrobacter, and Saccharoferments exhibited the closest relationship with nutrient degradation rate and surface enzyme activity, displaying a significant positive correlation. In summary, this study delineates a time-resolved correlative framework linking microbial succession to structural and enzymatic dynamics during oat grass degradation. Full article
(This article belongs to the Section Animal Nutrition)
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18 pages, 3016 KiB  
Article
Effects of Gallic Acid on In Vitro Ruminal Fermentation, Methane Emission, Microbial Composition, and Metabolic Functions
by Wei Zhu, Jianjun Guo, Xin Li, Yan Li, Lianjie Song, Yunfei Li, Baoshan Feng, Xingnan Bao, Jianguo Li, Yanxia Gao and Hongjian Xu
Animals 2025, 15(13), 1959; https://doi.org/10.3390/ani15131959 - 3 Jul 2025
Viewed by 355
Abstract
The objective of this study was to assess the effects of gallic acid (GA) on nutrient degradability, gas production, rumen fermentation, and the microbial community and its functions using in vitro fermentation methods. An in vitro experiment was conducted to test GA dose [...] Read more.
The objective of this study was to assess the effects of gallic acid (GA) on nutrient degradability, gas production, rumen fermentation, and the microbial community and its functions using in vitro fermentation methods. An in vitro experiment was conducted to test GA dose levels (0, 5, 10, 20, and 40 mg/g DM) in the cow’s diet. Based on the results of nutrient degradability, gas production, and rumen fermentation, the control group (0 mg/g DM, CON) and the GA group (10 mg/g DM, GA) were selected for metagenomic analysis to further explore the microbial community and its functions. The degradability of dry matter and crude protein, as well as total gas production, CH4 production, CH4/total gas, CO2 production, and CO2/total gas, decreased quadratically (p < 0.05) with increasing GA doses, reaching their lowest levels at the 10 mg/g DM dose. Total volatile fatty acid (VFA) (p = 0.004), acetate (p = 0.03), and valerate (p = 0.03) exhibited quadratic decreases, while butyrate (p = 0.0006) showed a quadratic increase with increasing GA doses. The 10 mg/g DM dose group had the lowest levels of total VFA, acetate, and valerate, and the highest butyrate level compared to the other groups. The propionate (p = 0.03) and acetate-to-propionate ratio (p = 0.03) linearly decreased with increasing gallic acid inclusion. At the bacterial species level, GA supplementation significantly affected (p < 0.05) a total of 38 bacterial species. Among these, 29 species, such as Prevotellasp.E15-22, bacteriumP3, and Alistipessp.CAG:435, were less abundant in the GA group, while 9 species, including Aristaeella_lactis and Aristaeella_hokkaidonensis, were significantly more abundant in the GA group. At the archaeal species level, the relative abundances of Methanobrevibacter_thaueri, Methanobrevibacter_boviskoreani, and Methanobrevibactersp.AbM4 were significantly reduced (p < 0.05) by GA supplementation. Amino sugar and nucleotide sugar metabolism, Starch and sucrose metabolism, Glycolysis/Gluconeogenesis, and Pyruvate metabolismwere significantly enriched in the GA group (p < 0.05). Additionally, Alanine, aspartate and glutamate metabolism was also significantly enriched in the GA group (p < 0.05). GA use could potentially be an effective strategy for methane mitigation; however, further research is needed to assess its in vivo effects in dairy cows over a longer period. Full article
(This article belongs to the Section Animal Nutrition)
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17 pages, 1790 KiB  
Article
Interaction Between Ruminal Acetate Infusion and Diet Fermentability on Milk Fat Production in Dairy Cows
by Natalie L. Urrutia, Camila Muñoz, Emilio M. Ungerfeld, Claudia Cisterna and Kevin J. Harvatine
Animals 2025, 15(13), 1931; https://doi.org/10.3390/ani15131931 - 30 Jun 2025
Viewed by 356
Abstract
Acetate is naturally produced in the rumen through feed degradation and fermentation. It serves as a primary energy source for ruminants and as a key substrate for de novo fatty acid synthesis in the mammary gland. The interaction of exogenous acetate with different [...] Read more.
Acetate is naturally produced in the rumen through feed degradation and fermentation. It serves as a primary energy source for ruminants and as a key substrate for de novo fatty acid synthesis in the mammary gland. The interaction of exogenous acetate with different animal and dietary factors is an area of growing interest, as it may have significant implications for milk fat synthesis. This study aimed to assess the effect of two diet fermentability levels on the short-term response of lactation to acetate supplementation in dairy cows. Eight ruminally cannulated multiparous European Holstein cows were randomly assigned to treatments in a crossover design that tested the effect of diet fermentability, acetate supply, and their interaction. Using corn silage as the only forage source and a constant forage-to-concentrate ratio, high-fermentability (HF) and low-fermentability (LF) diets were formulated. Acetate supply was investigated by infusing ruminally 10 moles of sodium acetate/d (ACE) or an equimolar infusion of control (CON). Therefore, the treatments were as follows: LF + CON; LF + ACE; HF + CON; and HF + ACE. No interactions between acetate and diet fermentability were found on performance variables. Acetate infusion decreased dry matter intake (DMI), milk yield, and milk protein yield and content but did not affect milk fat yield; however, it increased milk fat concentration, and this response tended to be more pronounced in the HF diet. Acetate infusions increased plasma β-hydroxybutyrate in the HF diet, but not in the LF diet, and increased plasma non-esterified fatty acid, which was likely a lipolysis response to reduced DMI and decreased energy balance. This study demonstrates that acetate availability can be a constraint on mammary lipogenesis, even with adequate dietary fiber. Full article
(This article belongs to the Section Animal Nutrition)
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16 pages, 1023 KiB  
Article
The Modification of Dairy Cow Rations with Feed Additives Mitigates Methane Production and Reduces Nitrate Content During In Vitro Ruminal Fermentation
by Everaldo Attard, Jamie Buttigieg, Kalliroi Simeonidis and Grazia Pastorelli
Gases 2025, 5(3), 12; https://doi.org/10.3390/gases5030012 - 23 Jun 2025
Viewed by 617
Abstract
This study evaluated the effects of feedstuffs and additives in dairy cow rations on rumen methane production and nitrate content in groundwater. Two basal rations and their supplements were analyzed in regard to proximate parameters, and an in vitro rumen fermentation system assessed [...] Read more.
This study evaluated the effects of feedstuffs and additives in dairy cow rations on rumen methane production and nitrate content in groundwater. Two basal rations and their supplements were analyzed in regard to proximate parameters, and an in vitro rumen fermentation system assessed methane release and nitrate levels over 72 h. Supplementing dairy cow rations with Brassica rapa (BR) boosted the ether extract content, while silage produced the highest amount of methane. Rapidly degrading substrates like BR and ground maize produced methane faster, but in smaller amounts, than straw and silage. BR, Opuntia ficus-indica (OFI), and Posidonia oceanica (PO)-supplemented rations had mixed effects; PO reduced the methane yield, while OFI increased methane production rates. BR-supplemented rations had the lowest nitrate levels, making it suitable for anaerobic digestion. The multivariate analysis showed strong correlations between crude protein, dry matter, and ash, while high-nitrate substrates inhibited methane production, supporting the literature on the role of nitrates in reducing methanogenesis. These results emphasize the need to balance nutrient composition and methane mitigation strategies in dairy cow ration formulations. Full article
(This article belongs to the Section Gaseous Pollutants)
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18 pages, 2339 KiB  
Article
Effect of Adding Alkaline Metal Ions Complexes Rumen Microbiota and Metabolome of Hu Lambs
by Mingyue Li, Chi Ma, Yalin Li, Ziyi An, Yilin Yang, Feng Gao, Changqing Li and Yingchun Liu
Animals 2025, 15(12), 1816; https://doi.org/10.3390/ani15121816 - 19 Jun 2025
Viewed by 301
Abstract
This study aimed to evaluate the effects of studying the effects of the alkali metal ion complexes (AMIC) on the rumen of lambs. Eighteen 3-month-old male Hu lambs (30 ± 2.5 kg) were randomly assigned to three groups (n = 6). Dietary [...] Read more.
This study aimed to evaluate the effects of studying the effects of the alkali metal ion complexes (AMIC) on the rumen of lambs. Eighteen 3-month-old male Hu lambs (30 ± 2.5 kg) were randomly assigned to three groups (n = 6). Dietary treatments were: control group (CG, base diet), group C1 (base diet + 0.15% AMIC), and group C2 (base diet + 0.30% AMIC). After 60 days of feeding, samples were collected for analysis. Compared with CG, rumen weight significantly increased in both C1 and C2 (p < 0.05). In C2, average daily gain (ADG), bacterial crude protein (BCP), propionic acid concentration, and rumen papillary length were significantly higher than in CG (p < 0.05). Rumen microbiota analysis showed that AMIC supplementation changed the microbial community composition, increasing the relative abundance of fiber-degrading bacteria (e.g., Prevotellaceae_UCG-001) and decreasing pathogenic Proteobacteria. In particular, rumen papillary length positively correlated with Unclassified Oscillospiraceae, Candidatus Saccharimonas, and Unclassified Clostridia vadinBB60 group. Metabolomic analysis revealed that quercetin 3-O-glucuronide levels increased in a dose-dependent manner with higher AMIC. This metabolite positively correlated with Prevotellaceae_UCG-001 abundance and ADG. At 0.30% AMIC, phospholipids PC(18:0/18:4(6Z,9Z,12Z,15Z)) and PE(18:0/16:1(9Z)) were significantly upregulated, and both positively correlated with Candidatus Saccharimonas, Unclassified Clostridia vadinBB60 group, and papillary morphology. In summary, AMIC supplementation affected metabolism by modulating the rumen microbiota, thereby promoting energy absorption and growth. The 0.30% AMIC inclusion significantly enhanced rumen papilla growth, increased the absorption area, promoted propionic acid production, reduced the acetic acid to propionic acid ratio, and ultimately improved the growth rate of Hu lambs. Thus, adding 0.30% AMIC was associated with improved growth performance. Full article
(This article belongs to the Section Small Ruminants)
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15 pages, 727 KiB  
Article
Effects of Corn Silage and Alfalfa Hay on Production and Nitrogen Excretion in Lactating Dairy Cows
by Daniel Scoresby, Izabelle A. M. A. Teixeira and Mireille Chahine
Nitrogen 2025, 6(2), 43; https://doi.org/10.3390/nitrogen6020043 - 10 Jun 2025
Viewed by 427
Abstract
A meta-regression was conducted on studies published from 2018 to 2023 to explore the effects of nutrient intakes from alfalfa (ALF) and corn silage (CS) on milk yield (MY), energy-corrected milk yield (ECM), N efficiency (NEFF), milk urea nitrogen (MUN), and [...] Read more.
A meta-regression was conducted on studies published from 2018 to 2023 to explore the effects of nutrient intakes from alfalfa (ALF) and corn silage (CS) on milk yield (MY), energy-corrected milk yield (ECM), N efficiency (NEFF), milk urea nitrogen (MUN), and manure nitrogen excretion (NMANURE) in Holstein lactating cows. The analysis included 193 studies with 698 individual treatment means. Multiple models were developed for each response variable using a backward stepwise approach and cross-evaluated against the database. Nutrient intake from both CS and ALF influenced MY and ECM, with ALF generally having a positive effect. The NEFF was also affected by nutrient intakes from both forages. Generally, greater protein intake reduced NEFF, whereas greater MY was associated with improved NEFF. An increase in the rumen-degradable protein intake (RDPI), especially from ALF, increased MUN. However, no significant effect of protein intake from CS on MUN was observed. Additionally, an increase in crude protein intake and RDPI, regardless of source (CS or ALF), led to an increase in g/d of NMANURE. Our results indicate that nutrient intakes from ALF and CS have different effects on production, excretion, and nitrogen efficiency, supporting their use in targeted nutrient and waste management strategies. Full article
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21 pages, 21284 KiB  
Article
Screening, Identification, and Whole-Genome Sequencing of Ferulic Acid Esterase-Producing Lactic Acid Bacteria from Sheep Rumen
by Mingxin Qiu, Yong Chen, Lei Wang, Luyu Li, Xiao Zhang, Zhuang Ma and Jiancheng Liu
Microorganisms 2025, 13(6), 1295; https://doi.org/10.3390/microorganisms13061295 - 31 May 2025
Viewed by 733
Abstract
Ferulic acid esterase (FAE) plays an important role in plant fiber degradation by catalyzing the hydrolysis of lignocellulosic structures. FAE-producing lactic acid bacteria (LAB), as potential probiotics, can improve ruminant digestion and gut health. In this study, two LAB strains (Q2 and Q6) [...] Read more.
Ferulic acid esterase (FAE) plays an important role in plant fiber degradation by catalyzing the hydrolysis of lignocellulosic structures. FAE-producing lactic acid bacteria (LAB), as potential probiotics, can improve ruminant digestion and gut health. In this study, two LAB strains (Q2 and Q6) with FAE activity were isolated from sheep rumen. Based on 16S rDNA sequencing, they were identified as Lactobacillus mucosae and Streptococcus equinus, respectively. Compared to Q2, Q6 demonstrated higher enzyme production, lactic acid yield, broader carbohydrate utilization, and stronger antimicrobial activity. The whole genome sequencing revealed Q2 and Q6 possess genomes of 2.14 Mbp and 1.95 Mbp, with GC contents of 46.81% and 37.30%, respectively. Q2 and Q6 exhibited the highest average nucleotide identity (ANI) with L. mucosae DSM 13345 (97.30%) and S. equinus ATCC 33317 (97.92%), respectively. The strains harbored 2101 and 1928 predicted genes, including 1984 and 1837 coding sequences (CDSs), respectively. GO enrichment analysis showed the CDSs predominantly associated with membranes (or cells), catalytic activity, and metabolic processes. KEGG analysis revealed both strains enriched in metabolic pathways, with Q6 showing a notably higher number of proteins in the ABC transporters and quorum sensing than Q2. Carbohydrate-active enzymes database (CAZy) profiling identified 75 CAZymes in Q2 and 93 CAZymes in Q6, with each strain containing one novel fae gene. Safety assessment identified 1 and 33 pathogenic genes, along with 2 and 4 putative antimicrobial peptide genes, in Q2 and Q6, respectively. Notably, Q6 carried 12 virulence factor genes. These findings suggest Q2 exhibits a superior safety profile compared to Q6, indicating a higher probability of Q2 being an effective probiotic strain. In conclusion, both LAB strains produce FAE. L. mucosae Q2 demonstrates suitability as a direct-fed probiotic for livestock, while Q6 exhibits potential as a silage inoculant, though comprehensive safety evaluations are required prior to its application. Full article
(This article belongs to the Section Veterinary Microbiology)
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19 pages, 2658 KiB  
Article
A Study on the Differences in Rumen Microbiota–Liver Gluconeogenesis–Mitochondrial Interaction Between Tibetan Sheep and Hu Sheep in the Qinghai–Tibet Plateau
by Qianling Chen, Yuzhu Sha, Xiu Liu, Min Gao, Xiaowei Chen, Wenxin Yang, Wei Huang, Jiqing Wang, Yapeng He, Xu Gao and Yanyu He
Animals 2025, 15(11), 1603; https://doi.org/10.3390/ani15111603 - 30 May 2025
Viewed by 645
Abstract
As high-quality sheep germplasm resources in China, Hu sheep are characterized by fast growth and development, high fecundity, and tolerance to drought and cold. Tibetan sheep, adapted to high-altitude environments, have developed strong environmental adaptability. To explore the differences in the interaction among [...] Read more.
As high-quality sheep germplasm resources in China, Hu sheep are characterized by fast growth and development, high fecundity, and tolerance to drought and cold. Tibetan sheep, adapted to high-altitude environments, have developed strong environmental adaptability. To explore the differences in the interaction among rumen microbial flora, hepatic gluconeogenesis, and mitochondrial function between Tibetan sheep and Hu sheep in the Qinghai–Tibet Plateau, this study systematically compared and analyzed the rumen flora density, key enzyme activities related to hepatic gluconeogenesis and mitochondrial function, and the expression levels of related genes in Tibetan sheep and Hu sheep under identical feeding management conditions, followed by correlation analysis. The results showed that Hu sheep had significantly higher densities of Ruminobacteramylophilus (Ram) and Fibrobacter succinogenes (Fs) associated with starch and protein degradation (p < 0.01). The expression levels of Forkhead box O1 (FOXO1), pyruvate carboxylase (PC) activity, and adenosine triphosphate (ATP) content were also significantly higher than those in Tibetan sheep (p < 0.01). In contrast, Tibetan sheep had higher densities of Butyrivibrio fibrisolvens (Bf), Ruminococcus albus (Ra), Ruminococcus flavefaciens (Rf), etc., related to cellulose degradation (p < 0.01). The gluconeogenesis-related genes, Glucose-6-phosphatase catalytic subunit 1 (G6PC1) and phosphoenolpyruvate carboxykinase1 (PCK1), and the activities of phosphoenolpyruvate carboxykinase (PEPCK) and fructose-1,6-bisphosphatase (FBPase) were significantly higher in Tibetan sheep than in Hu sheep (p < 0.01). Mitochondrial function-related genes Mitofusin-1 (Mfn1), Mitofusin-2 (Mfn2), subunit 6 of ATP synthase (ATP6), cytochrome b (Cytb), etc., also showed significantly higher expression in Tibetan sheep (p < 0.01). While no significant differences were observed in the contents of citric acid (CA), pyruvic acid (PA), glucose (Glu), etc. (p > 0.05). Correlation analysis indicated that rumen flora was associated with the key enzyme activities and gene expressions of hepatic gluconeogenesis and mitochondrial function to varying degrees. In summary, Tibetan sheep exhibit strong fiber degradation capacity, the efficient utilization of gluconeogenic intermediates, and mitochondrial oxidative phosphorylation (OXPHOS) ability, forming adaptive strategies for high-altitude environments. By contrast, Hu sheep show efficient protein and starch degradation capacity, thereby enhancing the supply of gluconeogenic precursors. It is indicated that when introducing Hu sheep to high-altitude areas, dietary intervention can be used to regulate rumen microorganisms, such as increasing fiber-decomposing bacteria or enhancing mitochondrial oxidative capacity, to counteract metabolic limitations induced by hypoxia. Full article
(This article belongs to the Section Animal Physiology)
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15 pages, 2107 KiB  
Article
Effects of Chestnut Tannin on Nutrient Digestibility, Ruminal Protease Enzymes, and Ruminal Microbial Community Composition of Sheep
by Mei Sun, Peinan Liu, Yuanyuan Xing, Meimei Zhang, Yongqiang Yu, Weiyun Wang and Dabiao Li
Fermentation 2025, 11(6), 302; https://doi.org/10.3390/fermentation11060302 - 23 May 2025
Viewed by 613
Abstract
The purpose of this research was to investigate the impact of chestnut tannins (CHTs) on nutrient digestibility, nitrogen balance, in situ crude protein (CP) digestibility, protease enzymes, and microbial community composition in sheep. Eighteen 1.5-year-old sheep (43.0 ± 2.0 kg initial BW) fitted [...] Read more.
The purpose of this research was to investigate the impact of chestnut tannins (CHTs) on nutrient digestibility, nitrogen balance, in situ crude protein (CP) digestibility, protease enzymes, and microbial community composition in sheep. Eighteen 1.5-year-old sheep (43.0 ± 2.0 kg initial BW) fitted with permanent ruminal cannula were selected and randomly divided into three groups, which were fed with CHTs added at 0, 2, and 6%/kg DM. The pre-feeding period lasted for 12 days, and the actual trial period was 18 days. Rumen fluid was collected to assess in situ crude protein (CP) degradability, while rumen digesta was analyzed for total and ruminal proteolytic bacterial populations. Using one-way ANOVA in SAS to analyze data, the results indicated that 2% CHT reduced in situ degradability by 26.23%, while 6% reduced it by 58.01% in the rumen of the sheep. The CP apparent digestibility, nitrogen metabolism, and population of proteolytic bacteria of sheep were decreased in the 6% CHT group (p < 0.05), while the above indices of the 2% CHT group were not affected. Furthermore, CHT supplementation significantly altered the ruminal microbial community structure. Particularly in the 2% CHT group, the relative abundances of Bacteroidota and Prevotella increased. LEfSe analysis revealed that Bacteroidale replaced U29-B03 as the dominant microbiota at 2% CHT. Doses of 2% CHT can be incorporated into sheep diets without impairing digestion. These findings support the inclusion of CHT doses of less than 2% for enhancing protein digestion and increasing the types of beneficial bacteria in the rumen, while doses above 6% should be avoided. Full article
(This article belongs to the Section Industrial Fermentation)
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14 pages, 1243 KiB  
Article
Effects of Substituting Sweet Sorghum for Corn Silage in the Diet on the Growth Performance, Meat Quality, and Rumen Microorganisms of Boer Goats in China
by Shuyang Wang, Fangzhu Guo, Yuchen Wang, Miaoyin Dong, Junkai Wang and Guoqing Xiao
Animals 2025, 15(10), 1492; https://doi.org/10.3390/ani15101492 - 21 May 2025
Viewed by 467
Abstract
Due to its superior drought tolerance, high biomass yield, and stress resistance, sweet sorghum (Sorghum bicolor L.) has emerged as an ideal candidate for sustainable forage production in arid, semi-arid, and mildly saline–alkaline regions. This study aimed to evaluate the effects of [...] Read more.
Due to its superior drought tolerance, high biomass yield, and stress resistance, sweet sorghum (Sorghum bicolor L.) has emerged as an ideal candidate for sustainable forage production in arid, semi-arid, and mildly saline–alkaline regions. This study aimed to evaluate the effects of replacing corn silage (CS) with either forage sorghum silage (FSS) or sugar sweet sorghum silage (SSS) on goat meat quality, the rumen microbial community, and meat composition. Thirty 3-month-old Boer goats (average body weight: 13.44 ± 1.67 kg) were randomly assigned to five dietary treatments; the control group contained 50% corn silage (CON), while the experimental groups contained 50% FSS (group I), 70% FSS (group II), 50% SSS (group III), or 70% SSS (group V), with each group receiving the same concentrate diet but different roughage sources. The results showed that compared to the CON group (50% CS), the experimental groups had a significantly increased average daily weight gain (ADG) (p < 0.05) and slaughter rate (SR). It is noteworthy that group III (50% SSS) showed a significant increase of 12.4% in SR (p < 0.01). Analysis of the silage characteristics and changes in the rumen microbial community revealed that feeding SSS and FSS increased the relative abundance of Ruminococcus in the rumen, further enhanced the degradation and conversion of silage neutral detergent fiber (NDF), and promoted the synthesis of fatty acids and amino acids. Specifically, FSS significantly increased the amino acid content in the meat, while SSS effectively improved the crude protein (CP) and crude fat (CF) contents. In conclusion, replacing 50% CS with FSS or SSS can effectively improve the meat quality and growth performance of Boer goats. Full article
(This article belongs to the Special Issue Impacts of Silage-Based Forages on Ruminant Health and Welfare)
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11 pages, 797 KiB  
Article
Comparison of In Vitro Fermentation Characteristics Among Five Maize Varieties
by Fabio Zicarelli, Serena Calabrò, Piera Iommelli, Micaela Grossi, Federico Infascelli and Raffaella Tudisco
Fermentation 2025, 11(5), 285; https://doi.org/10.3390/fermentation11050285 - 15 May 2025
Viewed by 612
Abstract
Maize (Zea mays L.) silage in the irrigated and flat areas of Italy represents the most important large ruminant feed crop due to the high dry matter yield and nutritive value per hectare. The aim of the investigation was to evaluate the [...] Read more.
Maize (Zea mays L.) silage in the irrigated and flat areas of Italy represents the most important large ruminant feed crop due to the high dry matter yield and nutritive value per hectare. The aim of the investigation was to evaluate the chemical composition and the in vitro fermentation patterns of five maize varieties (Tiesto, R700 1, MAS 78.T, DKC 7074 and KWS Kantico) freshly chopped and preserved via ensiling. The results indicated that the chemical composition was not significantly different among varieties. The substrates were incubated for 72 h with buffered rumen fluid collected from cow. The ensiling process slightly reduced gas production and fermentation kinetics, likely due to the consumption of soluble sugars during fermentation. Organic matter loss (OM loss) differed significantly (p < 0.01) among varieties in ensiled maize, correlating with their neutral detergent fiber (NDF) content. While total volatile fatty acid (VFA) production showed no significant differences between varieties, the buffer capacity ratio (BCR), an indicator of protein degradation, varied significantly. Ammonia production (NH3) was significantly higher in ensiled samples, supporting previous findings that ensiling increases non-protein nitrogen (NPN) due to microbial proteolysis and plant enzyme activity. The gas production profiles and fermentation rates over time showed minor differences between fresh and ensiled samples, with fresh material exhibiting faster fermentation kinetics due to the presence of soluble sugars. These findings highlight the importance of evaluating maize silage quality to optimize ruminant nutrition and feed efficiency. Full article
(This article belongs to the Special Issue Ruminal Fermentation)
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13 pages, 5029 KiB  
Article
Crystal Structure of the Multidomain Pectin Methylesterase PmeC5 from Butyrivibrio fibrisolvens D1T
by Vincenzo Carbone, Kerri Reilly, Carrie Sang, Linley R. Schofield, William J. Kelly, Ron S. Ronimus, Graeme T. Attwood and Nikola Palevich
Biomolecules 2025, 15(5), 720; https://doi.org/10.3390/biom15050720 - 14 May 2025
Viewed by 469
Abstract
Pectin is a dynamic and complex polysaccharide that forms a substantial proportion of the primary plant cell wall and middle lamella of forage ingested by grazing ruminants. Pectin methylesterases (PMEs) are enzymes that belongs to the carbohydrate esterase family 8 (CE8) and catalyze [...] Read more.
Pectin is a dynamic and complex polysaccharide that forms a substantial proportion of the primary plant cell wall and middle lamella of forage ingested by grazing ruminants. Pectin methylesterases (PMEs) are enzymes that belongs to the carbohydrate esterase family 8 (CE8) and catalyze the demethylesterification of pectin, a key polysaccharide in cell walls. Here we present the crystal structure of the catalytic domain of PmeC5 that is associated with a gene from Butyrivibrio fibrisolvens D1T that encodes a large secreted pectinesterase family protein (2089 aa) determined to a resolution of 1.33 Å. Protein in silico modelling of the secreted pectinesterase confirmed the presence of an additional pectate lyase (PL9) and adhesin-like domains. The structure of PmeC5 was the characteristic right-handed parallel β-helical topology and active site residues of Asp231, Asp253, and Arg326 typical of the enzyme class. PmeC5 is a large modular enzyme that is characteristic of rumen B. fibrisolvens megaplasmids and plays a central role in degrading plant cell wall components and releasing methanol in the rumen environment. Such secreted PMEs are significant contributors to plant fiber digestion and methane production, making them attractive targets for both methane mitigation strategies and livestock productivity enhancement. Full article
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15 pages, 951 KiB  
Article
Effects of Dietary Rumen-Protected Glucose and Rumen-Protected Taurine Levels on Growth Performance, Serum Biochemical Indicators, and Liver Health in Yaks
by Yuanyuan Chen, Xiaolin Wang, Lianghao Lu, Bao Zhang, Huaming Yang, Shoupei Zhao, Zhisheng Wang, Lizhi Wang, Quanhui Peng and Bai Xue
Animals 2025, 15(8), 1152; https://doi.org/10.3390/ani15081152 - 17 Apr 2025
Cited by 1 | Viewed by 664
Abstract
Yaks are an important livestock species on the Tibetan Plateau, but traditional grazing practices cause a sharp drop in their weight during winter, leading to grassland degradation due to overgrazing. Although off-site fattening can improve performance and protect ecology, it often leads to [...] Read more.
Yaks are an important livestock species on the Tibetan Plateau, but traditional grazing practices cause a sharp drop in their weight during winter, leading to grassland degradation due to overgrazing. Although off-site fattening can improve performance and protect ecology, it often leads to a negative energy balance, liver metabolism disorders, and immune impairment due to stress. However, the effects of rumen-protected glucose (RPG) and rumen-protected taurine (RPT) on yak liver health are not yet clear. The purpose of this study was to evaluate the effects of dietary RPG and RPT levels on the growth performance, serum biochemical parameters, liver antioxidant capacity, and immunity of yaks. Twenty-eight healthy yaks weighing 170 ± 10.4 kg were randomly divided into four treatments: LGLT (RPG: 1%—low RPG [LG]; RPT: 5 g/d—low RPT [LT]), LGHT (RPG: 1%—low RPG [LG]; RPT: 20 g/d—high RPT [HT]), HGLT (RPG: 3%—high RPG [HG]; RPT: 5 g/d—low RPT [LT]), and HGHT (RPG: 3%—high RPG [HG]; RPT: 20 g/d—high RPT [HT]). The results showed that compared with the LTHT treatment group, the HGHT group upregulated the serum concentrations of glucose (p = 0.004) and Interleukin-10 (p = 0.03), the relative mRNA expression of small heterodimer partners (p = 0.01), and the sterol 12-alpha-hydroxylase (p < 0.001), while reducing the serum concentration of gamma-glutamyl transferase (p = 0.048). The serum concentration of hepatic protein carbonyl (p = 0.005) and malondialdehyde (p = 0.03) was lower in the LGHT and HGHT treatment groups than in the LGLT and HGLT groups. The relative mRNA expression of Toll-like receptor 4 (p = 0.02), Interleukin-8 (p < 0.01), and Interleukin-1β (p < 0.01) was lower in the LGHT and HGHT groups than in the LGLT and HGLT groups. Tumor necrosis factor expression was lower (p = 0.04) and glucose transporter 2 expression was higher (p < 0.01) in the HGHT group compared to other treatment groups. The expression of glucokinase, glycogen synthase, pyruvate kinase, and farnesoid X receptor was higher in the HGLT treatment group than in other treatments (p < 0.01). In conclusion, dietary supplementation with 3% PRG and 5 g/d PRT can enhance liver antioxidant capacity and immune function, reduce lipid peroxidation, and promote glucose and bile acid metabolism in yaks. Full article
(This article belongs to the Section Cattle)
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