Search Results (21)

The Atlantic horse mackerel (Trachurus trachurus) and the Mediterranean horse mackerel (T. mediterraneus) are two commercially important species whose biological traits remain insufficiently studied in the Central Mediterranean Sea. This study examines their age, growth pattern, and, for the first time, otolith morphology in both species in the Eastern Ionian Sea. The intercept of the weight–length relationship was a = 0.00599 (95% CI = 0.0050–0.0072) for T. trachurus and a = 0.00801 (95% CI = 0.0072–0.0089) for T. mediterraneus, and the slope was b = 3.121 (95% CI: 3.058–3.183) and b = 2.994 (95% CI: 2.957–3.031), respectively. Age was estimated by counting annual growth increments, visible as alternating opaque and clear bands along the axis of the left sagittal otolith from the core to the posterior margin. Von Bertalanffy growth parameters were estimated as L_∞ = 34.65 cm, k = 0.31 year⁻¹, and t₀= −1.11 years for T. trachurus and L_∞ = 35.98 cm, k = 0.23 year⁻¹, and t_o = −1.60 years for T. mediterraneus. Otolith morphometrics showed significantly higher values (ANOVA, p-value < 0.05) in T. mediterraneus for all morphometric variables, except one, indicating larger and wider otoliths than those of T. trachurus, which can be a tool to distinguish the two species. A strong correlation was observed between the total length of the body and otolith metrics in both species. This study enhanced our scientific knowledge on the studied species’ life history traits and provides information for further ecological and stock assessment studies. Full article

Larimichthys crocea and Larimichthys polyactis, two commercially and ecologically important sciaenid species, are often morphologically confused (especially at the juvenile stage or for incomplete specimens), leading to limitations in traditional morphological taxonomic methods for accurate identification. Otoliths, as stable hard tissues with species-specific morphological characteristics, serve as an ideal tool for species discrimination. To investigate the efficacy of landmark-based methods in extracting morphological information from different surfaces of sagittal otoliths, this study analyzed six surfaces (medial, lateral, dorsal, ventral, anterior, and posterior) of left otoliths from two sciaenid species using geometric morphometrics. We collected 487 sagittal otolith samples from sciaenids in the Zhoushan Islands of the East China Sea (Larimichthys polyactis: 277 specimens; Larimichthys crocea: 210 specimens). Landmark coordinates were extracted using tps-series software, and morphological differences were quantified through principal component analysis (PCA), discriminant analysis, and thin-plate spline visualizations. Key results include: relative warp PCA showed cumulative contributions of PC1 + PC2 at 52.48% (medial), 52.87% (lateral), 71.29% (dorsal), 63.7% (ventral), 64.8% (anterior), and 67.85% (posterior), effectively discriminating species with Type I/III landmarks demonstrating highest contributions; centroid size analysis revealed significantly larger values in L. crocea across all surfaces (most pronounced on medial surface: F = 183.450, p < 0.05); discriminant analysis achieved peak cross-validated success on the medial surface (98.6% for L. polyactis, 95.2% for L. crocea), with other surfaces ranging from 79.6–83.6%. This confirms that multi-surface landmark analysis effectively captures morphological divergence, with the medial surface providing optimal species discrimination. The established method provides a reliable supplementary tool for the taxonomy of L. crocea and L. polyactis, and offers scientific support for fisheries resource survey, population dynamic monitoring, and conservation of these sciaenid species. Full article

The European seabass (Dicentrarchus labrax) is one of the most emblematic coastal fish species in the Northeast Atlantic, with high commercial value for fisheries and aquaculture, and importance for sport and recreational fishing. Despite its socio-economic importance, the Iberian divisions, Cantabrian Sea (8c) and the Atlantic Iberian waters (9a), defined by the International Council for the Exploration of the Sea (ICES), lack stock delimitation data. Moreover, this species is missing basic biological information, a seasonal reproductive fishing ban, and the annual landings in this region are more than double the levels recommended by ICES. To investigate the population structure of D. labrax in these areas, 140 adult individuals (36–51 cm of total length) were collected between January and March 2025 in three locations along the Atlantic coast of the Iberian Peninsula: Avilés (n = 47), Peniche (n = 48), and Lagos (n = 45). Fish from each location were analyzed for body geometric morphometrics (truss network) and otolith shape contour (Elliptical Fourier Descriptors). Data were evaluated using univariate and multivariate tests to assess spatial differences and reclassification success among locations. Results revealed regional differences using body morphometry and otolith shape analyses. The overall reclassification success was 68% for truss networking, 51% for otolith shape, and 65% when both methods were combined. Despite the observed differences, the absence of clear, isolated populations supports the ICES definition of a single, though not homogeneous, European seabass stock in the Atlantic Iberian coastal waters. Nevertheless, individuals from Avilés exhibited distinctive morphometric patterns and otolith shapes, suggesting possible adaptations to local selective pressures in slightly different environments. Further studies integrating genetic tools, otolith chemistry, parasitic fauna and telemetry analyses, as well as other fish samples from adjacent areas such as the Bay of Biscay, are recommended to achieve a more comprehensive understanding of the population structure and migration patterns of this key species in the Atlantic Iberian coastal waters. Full article

Traditional morphometric analysis of Large Yellow Croaker (Larimichthys crocea) relies heavily on manual dissection, which is time-consuming, labor-intensive, and prone to subjectivity. To address these limitations, we propose an automated quantitative approach based on deep-learning–driven instance segmentation. A dataset comprising 160 X-ray images of L. crocea was established, encompassing five anatomical categories: whole fish, air bladder, spine, eyes, and otoliths. Building upon the baseline YOLOv11-Seg model, we integrated a lightweight Convolutional Block Attention Module (CBAM) to construct an improved YOLOv11-CBAM network, thereby enhancing segmentation accuracy for complex backgrounds and fine-grained targets. Experimental results demonstrated that the modified model achieved superior performance in both mAP50 and mAP50–95 compared with the baseline, with particularly notable improvements in the segmentation of small-scale structures such as the air bladder and spine. By introducing coin-based calibration, pixel counts were converted into absolute areas and relative proportions. The measured area ratios of the air bladder, otoliths, eyes, and spine were 7.72%, 0.59%, 2.20%, and 8.48%, respectively, with standard deviations remaining within acceptable ranges, thus validating the robustness of the proposed method. Collectively, this study establishes a standardized, efficient, and non-destructive workflow for X-ray image-based morphometric analysis, providing practical applications for aquaculture management, germplasm conservation, and fundamental biological research. Full article

The large-eye dentex (Dentex macrophthalmus) is a relatively small sparid fish with increasing potential as a supplementary fishery resource in the Mediterranean Sea, particularly as traditional stocks face overexploitation. Despite its widespread distribution, biological data on this species, especially from Greek waters, remain scarce. This study presents the first comprehensive biological assessment of D. macrophthalmus in the Pagasitikos Gulf, focusing on population structure, growth, mortality, and the application of machine learning (ML) for age prediction. A total of 305 individuals were collected, revealing a female-biased sex ratio and negative allometric growth in both somatic and otolith dimensions. The von Bertalanffy growth parameters indicated a slow growth rate (k = 0.16 year⁻¹), with an estimated asymptotic length (L∞) of 25.97 cm. The population was found to be underexploited (E = 0.41), suggesting resilience to current fishing pressure. Stepwise regression and ML models were employed to predict age from otolith morphometrics. A linear model identified otolith weight and aspect ratio as the most significant predictors of age (R² = 0.8). Among the ML algorithms tested, the Neural Network model achieved the highest performance (R² = 0.764, MAPE = 14.10%), demonstrating its potential for accurate and efficient age estimation. These findings provide crucial baseline data for the sustainable management of D. macrophthalmus and highlight the value of integrating advanced ML techniques into fisheries biology. Full article

Otoliths are important structures for balance and hearing of fish and constitute a useful tool in fisheries science. This study provides, for the first time in the Mediterranean, information on the otolith morphometrics of Dentex maroccanus, collected from the South Aegean Sea, and enriches the existing information on its age and growth by sex. The otolith shape variables examined showed a more circular to square otolith shape, related to the body size. Significant differences between sexes were detected for the otolith Area, Diameter, Perimeter, and Radius. Exponential regressions were used to examine the relationship of the otolith variables with total body length, from which five showed a strong correlation (Diameter, Width, Radius, Area, and Perimeter). The eviscerated weight–length relationship exhibited an isometric growth for both sexes, whereas when total weight was applied, a positive allometric growth was found for females. Sagittal otolith readings revealed four age groups for females and five for males. A Bhattacharya method was used for age validation. Von Bertalanffy growth parameters were as follows: L∞ = 23.08, k = 0.27, t₀ = −1.93 for females and L∞ = 24.07, k = 0.24, t₀ = −2.26 for males. This research offers valuable biological information for Dentex maroccanus useful in fisheries science. Full article

The European hake (Merluccius merluccius) is a highly sought after, overfished commercial species with a high ecological value. Otolith morphometric characteristics were employed from 150 individuals captured from the Central Aegean Sea (Eastern Mediterranean) using a commercial trawler. Age reading was independently performed by three readers. A multivariate methodology identified the morphometric factors that significantly affect age estimation, and easy to use equations using limited morphological otolith characteristics with a high degree of accuracy were produced as a practical tool for fisheries management. A second tool using ML algorithms produced a highly accurate ML model with the ability to further predict European hake’s age using limited otolith morphometric characteristics. Both tools are important for assessing fish population dynamics, managing sustainable fishing practices, and ensuring the long-term health of marine ecosystems. Practically, the models could be implemented by collecting fish otolith samples, measuring limited morphometric features using imaging techniques, and inputting these measurements into the machine learning model. Both model outputs will allow researchers and fisheries managers to obtain rapid and reliable age estimates without the need for labor-intensive traditional methods. By integrating these models into routine fisheries assessment workflows, stakeholders could make more informed decisions about fish stock assessments and conservation strategies. Full article

Trachinus draco and Trachinus radiatus are two bycatch species of low commercial value and no sufficient knowledge on their biological features. In the present study, the weight–length relationship, age, growth, and ten otolith morphometric variables of these species were investigated in the southwestern Aegean Sea for the first time. Positive allometric and isometric growth in the weight were defined in T. draco and T. radiatus. The weight–length relationship was described by the parameters α = 0.002415 and b = 3.35745 in T. draco and α = 0.007582 and b = 3.09452 in T. radiatus. The von Bertalanffy growth function parameters were L_∞ = 44.51 cm, k = 0.15 year⁻¹, and t₀ = −1.31 years for T. draco and L_∞ = 58.47 cm, k = 0.16 year⁻¹, and t₀ = −0.78 years for T. radiatus. Ten otolith variables (radius, length, width, area, perimeter, roundness, circularity, form factor, rectangularity, and ellipticity) showed a significant relationship with size for both species, except the ellipticity in T. radiatus. The mean values of all the otolith variables were higher in T. radiatus than in T. draco. The otolith of T. radiatus was found to become more rectangular with size as compared to the otolith of T. radiatus. The results of this work can support further research on the behavioral and ecological features of the two species. Full article

An otolith shape and morphometric analysis was performed on European eel (Anguilla anguilla) subpopulations from five rivers and three coastal lagoons of Sardinia (central-western Mediterranean) to assess the role of different habitats on otolith development. Sagittal otolith shape was described by 11 harmonics from elliptic Fourier descriptors. Comparisons among the harmonics were run through canonical discriminant analyses (CDAs). The CDA reclassification rate (75.7%) demonstrated a spatial environmental discrimination among local eel subpopulations of Sardinia. The Euclidean distance values demonstrated a dissimilarity between the river and lagoon groups. The form factor and roundness shape indices were significantly higher in the river group than in the lagoon group. The distances of the first three rings to the otolith core revealed site-specific otolith development. Moreover, the annual otolith growth rate was faster in the lagoon group than in the river group. The differences among the studied sites in terms of sagittal otolith shape could relate to changes in different local stocks potentially related to environmental peculiarities. Establishing a direct correlation between otolith morphology and environmental factors is challenging, and further studies are needed to investigate the relationship between habitat type/environmental variation and growth/body characteristics of eels. Nevertheless, the achieved results suggest that this method can be considered to be a valuable tool for studying the ontogeny of the European eel. Full article

The shape of sagitta otoliths was used to compare individuals of little tunny (Euthynnus alleteratus) harvested on board commercial fishing vessels from the coastal areas along the Eastern Atlantic, including the Mediterranean Sea. Fish sampling and selection was designed to cover possible seasonal changes and tuna size. The research encompassed both morphometric and shape analyses of left sagittal otoliths extracted of 504 fish specimens. Four shape indices (Circularity, Roundness, Rectangularity, and Form-Factor) were significantly different between two groups, showing a statistical differentiation between two clear spatial units. The degree of divergence was even more pronounced along the rostrum, postrostrum, and excisura of the generated otolith outlines between these two groups. One group corresponds to the samples from the coastal areas in the Northeast Temperate Atlantic and Mediterranean Sea (NETAM Area) and a second group from the coastal areas off the Eastern Tropical Atlantic coast of Africa (ETA Area). This study is the first to use otolith shape to differentiate tunas from separate spatial units. These results could be used to re-classify previously collected samples and to correct time series of data collected. Full article

The age and growth of the blackspot seabream, Pagellus bogaraveo, were determined by examining sagittal otoliths from fish sampled in the eastern Adriatic Sea. A total of 674 specimens (181 males, 90 hermaphrodites, 108 females, and 295 immatures) ranging from 8.80 to 47.27 cm (21.93 ± 9.00 cm) in total length were analyzed. The maximum observed age for the whole sample was 13 years. The sample was dominated by 1-year-old specimens as a consequence of an abundance of juvenile specimens collected by beach seines. Growth was described by the von Bertalanffy growth curve (L_∞ = 52.3 cm, K = 0.15 year⁻¹, t₀ = 0.49 year, R² = 0.97), and the growth performance index (Φ’) was 2.61. The length, width, thickness, and mass of the otoliths were compared with the total length and age of P. bogaraveo from the eastern Adriatic. The analysis showed that the measures were adequate predictors of age. These results can be of value for more effective management measures aimed at the conservation of this species. Full article

Otoliths are paired calcified structures in the inner ear of teleosts that function in hearing and balance. In this study, the use of otolith morphometrics and shape analysis were explored to delineate the redfin species under the genus Decapterus from the Sulu Sea, Philippines, namely, Decapterus kurroides, D. smithvanizi, and D. tabl. Results showed that the mean otolith shapes are unique within species (p < 0.001). The otolith size-related (OW—otolith weight, OL—otolith length, OH—otolith height, OA—otolith area, and OP—otolith perimeter) and shape-related (RE—rectangularity, SQ—squareness, EL—ellipticity, RO—roundness, AR—aspect ratio, FF—form factor, CO—compactness, and CI—circularity) morphometric indices also showed significant variations (p < 0.001) among the three species. Distinct regions differentiating D. kurroides from the other two species were seen along the dorsal margin of the otoliths, which was supported by its significantly higher values for OH (size-related index) and RO (shape-related index). In addition, the morphometric indices showed significant variations (p < 0.001), except for RE. Furthermore, it was revealed that the size-related indices were able to separate D. kurroides from the other two species, which turned out to be indifferent. The results provided relevant data on the use of otoliths as an additional confirmatory tool in species delineation of the identified redfin species, and, therefore, offer opportunities of applying the same method in delineation and, eventually, identification of species from other genera, especially those that closely resemble each other. Full article

The sagitta otoliths of teleostean fishes are usually used in diverse studies. Their shapes are species-specific, and the qualitative description of their morphological features seems to be a simple task, despite its subjectivity. On the other hand, morphometric techniques have been developed with a focus on objectivity, reproducibility, and accuracy. Considering this, the otoliths morphology was reviewed and evaluated in terms of robustness as a taxonomic tool and to highlight ecomorphological patterns. The otoliths morphology of 179 teleostean fishes from the Southern Atlantic were analyzed. For each species, the fish total length range, eighteen otolith morphological features (OMFs), and relative proportions were annotated. Species habitat and habit were also recorded. Data analyses were based on exploratory analysis, correlation, nonmetric multidimensional scaling, and a two-way permutational analysis of variance. The most descriptive OMFs were: colliculum, sulcus acusticus (morphology, position, orientation, and opening), and otolith profile. The otolith morphology was significantly related to species habitat and habit, with a new pattern described for deep-ocean pelagic species. In conclusion, otoliths morphology is robust whenever it is based on the comparative method application (otoliths among otoliths), considering the constant updates of fishes’ taxonomy and the use of proper sample sizes linked to morphometric techniques. Full article

A recent study was performed to assess the morphometric variation of otoliths of the Decapterus kurroides collected in the northern Sulu and southern Sibuyan seas in delineating fish stocks. Seven of the otolith morphometric descriptors (otolith length, OL; otolith height, OH; otolith weight OW; otolith area, OA; otolith perimeter, OP; ellipticity, EL; and aspect ratio, AR) demonstrated a significant positive correlation with fish length and six (rectangularity, RE; squareness, SQ; roundness, RO; circularity, CI; compactness, CO; and form factor, FF) demonstrated a significant negative correlation. In terms of intraspecific comparisons, almost all the otolith morphometric descriptors were significantly different between the two sites (except RE and OH). Further, principal component (PC) analysis showed that direct otolith morphometric descriptors such as OL, OH, OW, OA, and OP explained 61.71% of the differences (PC1). In contrast, derived otolith descriptors such as EL, AR, and CO explained 22.00% of the variations (PC2) for a total of 83.71% explained variations with the eight otolith morphometric descriptors. Statistics reveal that D. kurroides from the Sibuyan Sea have significantly larger, heavier, and more elliptical otoliths than those from the Sulu Sea. Results suggested that the D. kurroides from Sulu and Sibuyan seas are two different phenotypic stocks. Further studies such as otolith microchemistry, genetics, other life history-based studies, and present exploitation levels should be carried out to supplement the results of this study to fully establish the D. kurroides stock structures within Philippine waters. Full article

To understand the functional meaning of morphological traits in the exploitation of natural resources, it is necessary to develop a quantitative, meaningful scheme for understanding ecophenotypes; this will facilitate management and conservation, which are the most pressing challenges in vulnerable aquatic environments. In this context, the management of cryptic and very similar species is more challenging, because of the difficulty of distinguishing them and determining their frequency in sympatry, even though they do not necessarily have the same ecologies. As such, in order to understand how morphological similarities are associated with their ecology, thirteen morphometric characteristics related to body landmark-based geometric morphometries, sagittal otolith morphology, and shape were examined in mature Chelon auratus and Chelon saliens, which were collected from the coastal waters of the southwest Caspian Sea between October 2020 and April 2021. Univariate and multivariate analysis of variance were conducted to evaluate the potential morphological differences between the species. The analyses highlight the morphological differences between C. auratus and C. saliens, and identify potentially helpful traits for using body and otolith shape for the interspecific distinction of these very similar species of Caspian mullet, which can reflect functional similarity and are an important component of community ecology. Full article