Search Results (593)

Fruit flies that belong to the genus Zeugodacus (Diptera: Tephritidae) pose significant threats as invasive pests of agricultural crops in Asia and sub-Saharan Africa. The intensification of transboundary trade in fresh horticultural produce has increased the risk of introducing invasive species such as fruit flies, more so through the inadvertent transport of their immature developmental stages. Such immature stages of fruit flies belonging to the Tephritidae family are frequently intercepted at the international borders worldwide and are unable to be identified to the species level using morphological characteristics. Molecular identification using mitochondrial Cytochrome Oxidase I (COI) gene has proven to be quite useful, as they are not constrained by developmental stages, sex, or colour morphs of the pest species in question. Also, real-time PCR-based species-specific assays offer quicker turnaround time since they do not require any post-PCR procedures. This study evaluated the utility of a real-time PCR assay based on the COI gene region to identify Zeugodacus cucurbitae from other Tephritid species. The developed real-time PCR assay provides a swift and precise way of discriminating between these highly invasive pest species during an interception event for rapid decision making. High specificity, having no cross-reactions with closely related Tephritids, and sensitivity of the developed assay will be extremely useful in discriminating Z. cucurbitae from other closely related fruit fly species. Z. cucurbitae-specific real-time PCR developed in this study is appropriate for organizations that carry out routine diagnostics to facilitate fresh produce imports and exports. Our assay is fully optimized for rapid deployment at international borders, offering reliable detection of the target species regardless of developmental stage, sex, or geographic origins. Full article

Brain organoid technology has revolutionized in vitro modeling of human neurodevelopment and disease, providing unprecedented insights into cortical patterning, neural circuit assembly, and pathogenic mechanisms of neurological disorders. Critically, human brain organoids uniquely recapitulate human-specific developmental processes—such as the expansion of outer radial glia and neuromelanin—that are absent in rodent models, making them indispensable for studying human brain evolution and dysfunction. However, a major bottleneck persists: Extended culture periods (≥6 months) are empirically required to achieve late-stage maturation markers like synaptic refinement, functional network plasticity, and gliogenesis. Yet prolonged conventional 3D culture exacerbates metabolic stress, hypoxia-induced necrosis, and microenvironmental instability, leading to asynchronous tissue maturation—electrophysiologically active superficial layers juxtaposed with degenerating cores. This immaturity/heterogeneity severely limits their utility in modeling adult-onset disorders (e.g., Alzheimer’s disease) and high-fidelity drug screening, as organoids fail to recapitulate postnatal transcriptional signatures or neurovascular interactions without bioengineering interventions. We summarize emerging strategies to decouple maturation milestones from rigid temporal frameworks, emphasizing the synergistic integration of chronological optimization (e.g., vascularized co-cultures) and active bioengineering accelerators (e.g., electrical stimulation and microfluidics). By bridging biological timelines with scalable engineering, this review charts a roadmap to generate translationally relevant, functionally mature brain organoids. Full article

Proanthocyanidins are a subclass of flavonoids formed through a poorly understood polymerization process that forms chains of 3–30 catechins and epi-catechins. Proanthocyanidins serve as UV protectants and antifeedants that accumulate in diverse plant species, including the lotus. To identify candidate genes underlying proanthocyanidin synthesis and polymerization, we generated and functionally annotated transcriptomes from seedpods and seed epicarps of two lotus cultivars, “Guoqing Hong” and “Space Lotus”, which accumulate markedly divergent proanthocyanidin levels across the immature, near-mature, and mature developmental stages. Our transcriptome analysis was based on a total of 262.29 GB of raw data. We aligned the transcriptome data with the lotus genome and obtained an alignment efficiency that ranged from 91.74% to 96.44%. Based on the alignment results, we discovered 4774 new genes and functionally annotated 3232 genes. A total of 14,994 differentially expressed genes (DEGs) were identified from two-by-two comparisons of transcript libraries. We found 61 DEGs in the same developmental stage in the same tissue of different species. Comparative transcriptome analysis of seedpods and seed epicarps from two cultivars identified 14,994 differentially expressed genes (DEGs), of which 10 were functionally associated with proanthocyanidin synthesis and 9 were possibly implicated in the polymerization reactions. We independently quantified the expression of the candidate genes using qRT-PCR. Significant differences in the expression of candidate genes in different tissues and periods of lotus species are consistent with particular genes contributing to the polymerization of catechins and epi-catechins into proanthocyanidins in lotus seedpods and seed epicarps. Full article

Lotus (Nelumbo nucifera Gaertn.) is a quintessential medicinal and edible plant, exhibiting marked differences in therapeutic effects among its various parts. The lotus seed constitutes a key component of this plant. Notably, the entire seed and the plumule display distinct medicinal properties. To investigate the “homologous plants with different effects” phenomenon in traditional Chinese medicine, this study established a Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging (MALDI-MSI) method. This study employed immature lotus seeds as the experimental material, diverging from the mature seeds conventionally used. Conductive double-sided tape was employed for sample preparation, and complete longitudinal sections of the seeds were obtained, followed by MALDI-MSI analysis to identify and visualize the spatial distribution of characteristic secondary metabolites within the entire seeds. The results unveiled the diversity of metabolites in lotus seeds and their differential distribution across tissues, with pronounced distinctions in the plumule. A total of 152 metabolites spanning 13 categories were identified in lotus seeds, with 134, 89, 51, and 98 metabolites discerned in the pericarp, seed coat, cotyledon, and plumule, respectively. Strikingly, young lotus seeds were devoid of liensinine/isoliensinine and neferine, the dominant alkaloids of mature lotus seed plumule, revealing an early-stage alkaloid profile that sharply contrasts with the well-documented abundance found in mature seeds and has rarely been reported. We further propose a biosynthetic pathway to explain the presence of the detected benzylisoquinoline and the absence of the undetected bisbenzylisoquinoline alkaloids in this study. These findings present the first comprehensive metabolic atlas of immature lotus seeds, systematically exposing the pronounced chemical divergence from their mature counterparts, and thus lays a metabolomic foundation for dissecting the spatiotemporal mechanisms underlying the nutritional and medicinal value of lotus seeds. Full article

Studying the nutritional ecology of Neoseiulus cucumeris (Oudemans) at different temperatures is a fundamental tool for improving mass production for use in biological control of pest mites. The current research studied the impact of both food types and temperatures on the life history and demographic parameters of the predator mite N. cucumeris. Mite cultures in the laboratory were developed using Tetranychus urticae Koch, and N. cucumeris was collected from field plants. The developmental stages of N. cucumeris fed on date palm pollen and the immature stages of T. urticae were investigated in a laboratory setting at different temperatures. Our research revealed that N. cucumeris readily accepted both food types at all the tested temperatures. The developmental stages and adult longevity of N. cucumeris, both female and male, decreased dramatically when the temperature increased from 18 °C to 34 °C. The net reproductive rate (R₀) reached its greatest values of 22.52 and 9.72 offspring/individual at 26 °C, and the intrinsic rate of increase (r_m) reached its maximum values of 0.17 and 0.13 day⁻¹ at 34 °C and minimum of 0.12 and 0.10 day⁻¹ at 18 °C, when fed on date palm pollen and immature stages of T. urticae, respectively. Conversely, the average generation time (T) showed a notable reduction from 22.48 to 16.48 and 20.88 to 16.76 days, accompanied by an upsurge in temperature from 18 °C to 34 °C, when fed on date palm pollen and immature stages of T. urticae, respectively. The finite rate of growth (λ) exhibited distinct variations, reaching its highest value at 34 °C, 26 °C, and 18 °C when fed on date palm pollen and immature stages of T. urticae, respectively. From these results, we can conclude that N. cucumeris was successfully fed date palm pollen as an alternate source of nourishment. In addition, the immature stages of T. urticae are suitable as food sources for N. cucumeris because they shorten the mean generation time. Therefore, the success of mass-rearing the predator mite N. cucumeris on a different, less expensive diet, such as date palm pollen, and determining the most suitable temperature for it has increased its spread as a biocontrol agent. Full article

Background: Arthropod-borne diseases primarily affect tropical and subtropical regions, exhibiting seasonal patterns that peak during hot and rainy months when conditions favor mosquito vector proliferation. Factors such as high temperatures, elevated humidity, rainfall, urbanization, and the abundance of natural and artificial breeding sites influence Aedes vector dynamics. In this context, arboviruses pose significant public health challenges, likely worsened by global warming. In Brazil, Aedes (Stegomyia) aegypti (Linnaeus, 1762) is the primary vector for yellow fever, dengue, chikungunya, and Zika. Aedes (Stegomyia) albopictus (Skuse, 1894) is an important global arbovirus vector and is considered a potential vector in Brazil. Entomological surveillance of these species often uses oviposition traps targeting immature stages. Evaluating studies that use ovitraps to collect Ae. aegypti and Ae. albopictus egg is essential for improving mosquito surveillance strategies. This study systematically reviewed peer-reviewed articles on ovitrap-based surveillance of Aedes mosquitoes in Brazil, published in Portuguese and English from 2012 to 2022. The findings suggest that ovitraps are an effective method for detecting the presence or absence of Ae. aegypti and Ae. albopictus, serving as a reliable proxy for estimating mosquito abundance in Brazilian contexts. Full article

Remote sensing tools have been proposed to assist with rice crop monitoring but have been developed and validated on ponded rice. This two-year study was conducted on a commercial rice farm with irrigation automation technology aimed to (i) understand how canopy reflectance differs between high-yielding ponded and aerobic rice, (ii) validate the feasibility of using the squared simplified canopy chlorophyll content index (SCCCI²) for N uptake estimates, and (iii) explore the SCCCI² and similar chlorophyll-sensitive indices for grain quality monitoring. Multispectral images were collected from an unmanned aerial vehicle during both rice-growing seasons. Above-ground biomass and nitrogen (N) uptake were measured at panicle initiation (PI). The performance of single-vegetation-index models in estimating rice N uptake, as previously published, was assessed. Yield and grain quality were determined at harvest. Results showed that canopy reflectance in the visible and near-infrared regions differed between aerobic and ponded rice early in the growing season. Chlorophyll-sensitive indices showed lower values in aerobic rice than in the ponded rice at PI, despite having similar yields at harvest. The SCCCI² model (RMSE = 20.52, Bias = −6.21 Kg N ha⁻¹, and MAPE = 11.95%) outperformed other models assessed. The SCCCI², squared normalized difference red edge index, and chlorophyll green index correlated at PI with the percentage of cracked grain, immature grain, and quality score, suggesting that grain milling quality parameters could be associated with N uptake at PI. This study highlights canopy reflectance differences between high-yielding aerobic (averaging 15 Mg ha⁻¹) and ponded rice at key phenological stages and confirms the validity of a single-vegetation-index model based on the SCCCI² for N uptake estimates in ponded and non-ponded rice crops. Full article

Recent advances in microbiome studies have deepened our understanding of endosymbionts and gut-associated microbiota in host biology. Of those, lepidopteran systems in particular harbor a complex and diverse microbiome with various microbial taxa that are stable and transmitted between larval and adult stages, and others that are transient and context-dependent. We highlight key microorganisms—including Bacillus, Lactobacillus, Escherichia coli, Pseudomonas, Rhizobium, Fusarium, Aspergillus, Saccharomyces, Bifidobacterium, and Wolbachia—that play critical roles in microbial ecology, biotechnology, and microbiome studies. The fitness implications of these microbial communities can be variable; some microbes improve host performance, while others neither positively nor negatively impact host fitness, or their impact is undetectable. This review examines the central position played by the gut microbiota in interactions of insects with plants, highlighting the functions of the microbiota in the manipulation of the behavior of herbivorous pests, modulating plant physiology, and regulating higher trophic levels in natural food webs. It also bridges microbiome ecology and applied pest management, emphasizing S. frugiperda as a model for symbiont-based intervention. As gut microbiota are central to the life history of herbivorous pests, we consider how these interactions can be exploited to drive the development of new, environmentally sound biocontrol strategies. Novel biotechnological strategies, including symbiont-based RNA interference (RNAi) and paratransgenesis, represent promising but still immature technologies with major obstacles to overcome in their practical application. However, microbiota-mediated pest control is an attractive strategy to move towards sustainable agriculture. Significantly, the gut microbiota of S. frugiperda is essential for S. frugiperda to adapt to a wide spectrum of host plants and different ecological niches. Studies have revealed that the microbiome of S. frugiperda has a close positive relationship with the fitness and susceptibility to entomopathogenic fungi; therefore, targeting the S. frugiperda microbiome may have good potential for innovative biocontrol strategies in the future. Full article

Strawberry planting requires different amounts of soil water-holding capacity and fertilizer at different growth stages. Determining the stages of strawberry growth has important guiding significance for irrigation, fertilization, and picking. Quick and accurate identification of strawberry plants at different stages can provide important information for automated strawberry planting management. We propose an improved multistage identification model for strawberry based on the YOLOv9 algorithm—the ASHM-YOLOv9 model. The original YOLOv9 showed limitations in detecting strawberries at different growth stages, particularly lower precision in identifying occluded fruits and immature stages. We enhanced the YOLOv9 model by introducing the Alterable Kernel Convolution (AKConv) to improve the recognition efficiency while ensuring precision. The squeeze-and-excitation (SE) network was added to increase the network’s capacity for characteristic derivation and its ability to fuse features. Haar wavelet downsampling (HWD) was applied to optimize the Adaptive Downsampling module (Adown) of the initial model, thereby increasing the precision of object detection. Finally, the CIoU function was replaced by the Minimum Point Distance based IoU (MPDIoU) loss function to effectively solve the problem of low precision in identifying bounding boxes. The experimental results demonstrate that, under identical conditions, the improved model achieves a precision of 97.7%, a recall of 97.2%, mAP50 of 99.1%, and mAP50-95 of 90.7%, which are 0.6%, 3.0%, 0.7%, and 7.4% greater than those of the original model, respectively. The parameters, model size, and floating-point calculations were reduced by 3.7%, 5.6% and 3.8%, respectively, which significantly boosted the performance of the original model and outperformed that of the other models. Experiments revealed that the model could provide technical support for the multistage identification of strawberry planting. Full article

The automated detection and classification of immature macauba (Acrocomia aculeata) fruits is critical for improving post-harvest processing and quality control. In this study, we present a comparative evaluation of two state-of-the-art YOLO architectures, YOLOv11x and YOLOv12x, trained on the newly constructed VIC01 dataset comprising 1600 annotated images captured under both background-free and natural background conditions. Both models were implemented in PyTorch and trained until the convergence of box regression, classification, and distribution-focal losses. Under an IoU (intersection over union) threshold of 0.50, YOLOv11x and YOLOv12x achieved an identical mean average precision (mAP₅₀) of 0.995 with perfect precision and recall or TPR (true positive rate). Averaged over IoU thresholds from 0.50 to 0.95, YOLOv11x demonstrated superior spatial localization performance (mAP_50–95 = 0.973), while YOLOv12x exhibited robust performance in complex background scenarios, achieving a competitive mAP_50–95. Inference throughput averaged 3.9 ms per image for YOLOv11x and 6.7 ms for YOLOv12x, highlighting a trade-off between speed and architectural complexity. Fused model representations revealed optimized layer fusion and reduced computational overhead (GFLOPs), facilitating efficient deployment. Confusion-matrix analyses confirmed YOLOv11x’s ability to reject background clutter more effectively than YOLOv12x, whereas precision–recall and F1-score curves indicated both models maintain near-perfect detection balance across thresholds. The public release of the VIC01 dataset and trained weights ensures reproducibility and supports future research. Our results underscore the importance of selecting architectures based on application-specific requirements, balancing detection accuracy, background discrimination, and computational constraints. Future work will extend this framework to additional maturation stages, sensor fusion modalities, and lightweight edge-deployment variants. By facilitating precise immature fruit identification, this work contributes to sustainable production and value addition in macauba processing. Full article

This research investigated the temporal dynamics of the anthropogenic impact of fishing pressure on the resilience of the fish species Sarotherodon melanotheron (Rüppel, 1858) in the African Lake Toho, located in southwest Benin. The sampling and analysis of monthly length frequency data were conducted from April 2002 to March 2003 and from April 2022 to March 2023 using the FAO-ICLARM Stock Assessment Tool (FiSAT II software program (version 1.2.2.). The analysis of the S. melanotheron population in Lake Toho revealed a significantly diminishing resilience potential, reflected mainly in general reductions in both the average size and weight of individuals. There was a notable reduction in the size of Sarotherodon melanotheron individuals caught between 2002–2003 and 2022–2023, reflecting the increased pressure on juvenile size classes. Catches are now concentrated mainly on immature fish, revealing increasing exploitation before sexual maturity is reached. An analysis of maturity stages showed a decrease in the percentage of mature individuals in the catches (69.27% in 2002–2003 compared to 55.07% in 2022–2023) and a reduction in the number of mega-spawners (4.53% in 2002–2003 compared to 1.56% in 2022–2023). Growth parameters revealed a decrease in asymptotic length (from 32.2 cm to 23.8 cm) and longevity (from 9.37 years to 7.89 years), while the growth coefficient slightly increased. The mean size at first capture and optimal size significantly declined, indicating increased juvenile exploitation. The total and natural mortalities increased, whereas the fishing mortality remained stable. The exploitation rate remained high, despite a slight decrease from 0.69 to 0.65. Finally, the declines in the yield per recruit, maximum sustainable yield, and biomass confirm the increasing fishing pressure, leading to growth overfishing, recruitment overfishing, reproductive overfishing, and, last but not least, a decreasing resilience potential. These findings highlight the growing overexploitation of S. melanotheron in Lake Toho, compromising stock renewal, fish population resilience, sustainability, and production while jeopardizing local food safety. Full article

This critical narrative review presents the concepts and methods that have been or are currently applied in the treatment of periapical tissue changes in mature and immature permanent teeth. Treatment success is defined as the healing of the inflammatory lesion in permanent teeth and, additionally, the completion of root development in immature teeth. Background/Objectives: Endodontics focuses on the prevention and treatment of diseases affecting the dental pulp and periapical tissues. Periapical changes have been managed using various methods depending on factors such as the extent of the lesion and the stage of root and apical development. Conventional root canal treatment, revitalization, and apexification have all been employed. Methods: Three databases (PubMed, Scopus, and Web of Science) were searched for studies discussing different treatment approaches, materials, and the efficacy of techniques used over time in mature and immature permanent teeth. Results: This review includes seven case reports, seven case series, and three cohort studies, each detailing the treatment method, case characteristics, follow-up period, and treatment outcomes. Conclusions: Modern materials have significantly improved the outcomes of revitalization and apexification procedures. These methods can now compete with or even surpass the clinical effectiveness of conventional root canal therapy. Full article

The present study focused on the Upper Cretaceous to Middle Miocene sequence in the Central Gulf of Suez, Egypt. The Upper Cretaceous to Middle Miocene sequence in the October field is thick and deeply buried, consisting mainly of brown limestone, chalk limestone, and reefal limestone intercalated with clastic shale. This study integrated various datasets, including total organic carbon (TOC), Rock-Eval pyrolysis, visual kerogen examination, vitrinite reflectance (%Ro), and bottom-hole temperature measurements. The main objective of this study is to delineate the source rock characteristics of these strata regarding organic richness, thermal maturity, kerogen type, timing of hydrocarbon transformation and generation. The Upper Cretaceous Brown Limestone Formation is represented by 135 samples from four wells and is considered to be a fair to excellent source rock, primarily containing type I and II kerogen. It is immature to early mature, generating oil with a low to intermediate level of hydrocarbon conversion. The Eocene Thebes Formation is represented by 105 samples from six wells and is considered to be a good to fair oil source rock with some potential for gas, primarily containing type II and II/III kerogen. Most samples are immature with a low level of hydrocarbon conversion while few are mature having an intermediate degree of hydrocarbon conversion. The Middle Miocene Lower Rudeis Formation is represented by 8 samples from two wells and considered to be a fair but immature source rock, primarily containing type III kerogen with a low level of conversion representing a potential source for gas. The Middle Miocene Belayim Formation is represented by 29 samples from three wells and is considered to be a poor to good source rock, primarily containing kerogen type II and III. Most samples are immature with a low level of hydrocarbon conversion while few are mature having an intermediate degree of hydrocarbon conversion. 1D basin model A-5 well shows that the Upper Cretaceous Brown Limestone source rock entered the early oil window at 39 Ma, progressed to the main oil window by 13 Ma, and remains in this stage today. The Eocene Thebes source rock began generating hydrocarbons at 21.3 Ma, advanced to the main oil window at 11 Ma, and has been in the late oil window since 1.6 Ma. The Middle Miocene Lower Rudeis source rock entered the early oil window at 12.6 Ma, transitioned to the main oil window at 5.7 Ma, where it remains active. In contrast, the Middle Miocene Belayim source rock has not yet reached the early oil window and remains immature, with values ranging from 0.00 to 0.55 % Ro. The transformation ratio plot shows that the Brown Limestone Formation began transforming into the Upper Cretaceous (73 Ma), reaching 29.84% by the Miocene (14.3 Ma). The Thebes Formation initiated transformation in the Late Eocene (52.3 Ma) and reached 6.42% by 16.4 Ma. The Lower Rudeis Formation began in the Middle Miocene (18.7 Ma), reaching 3.59% by 9.2 Ma. The Belayim Formation started its transformation at 11.2 Ma, reaching 0.63% by 6.8 Ma. Full article

Priophorus fulvostigmatus, a species of leaf-cutter wasp, is an important leaf-feeding pest on strawberries. We investigated the effects of temperature and soil moisture content on key life cycle parameters of P. fulvostigmatus. The development time, survival, fecundity, and life table parameters of P. fulvostigmatus were observed at five temperatures. Pupal development and survival under five moisture contents (8%, 12%, 16%, 20%, and 24%) and four durations of water immersion (0, 1, 3, and 5 d) were recorded. P. fulvostigmatus could complete its life cycle at a constant temperature range of 16–28 °C. The duration of the immature stage first decreased and then increased with rising temperature, being longest at 16 °C and shortest at 25 °C. Female longevity and female fecundity did not differ between the temperature range of 16–25 °C. However, survival rates at all developmental stages decreased with increasing temperature. At 28 °C, both fecundity and survival rates of P. fulvostigmatus were significantly reduced compared to other temperatures. Compared with that at the constant temperature of 22 °C, the developmental duration of each stage was similar at a fluctuating temperature of 22 °C. The number of eggs laid per female, the longevity of male adults, and the eclosion rate were all significantly reduced. The net reproductive rate (R₀) under constant temperature conditions was significantly higher than under fluctuating temperature conditions, and the mean generation period (T), intrinsic rate of increase (r), and finite rate of increase (λ) differed significantly. The soil moisture content significantly impacted the pupation and eclosion of P. fulvostigmatus. Differences in soil moisture content had no significant effect on the duration of development; a moisture content of 8–16% was more suitable for their pupation and eclosion. Pupal development differed significantly between different periods of water immersion after the mature larvae were immersed in the soil. The longer the larvae remained in the soil, the lower their emergence rate after immersion. Thus, environmental temperature affected the growth, reproduction, and survival of P. fulvostigmatus. The optimal soil moisture for pupation of mature larvae was 12% to 16%. After the larvae were immersed in soil, the emergence rate was significantly reduced. These findings expand our understanding of the biological characteristics of P. fulvostigmatus and can facilitate the development of prevention and control strategies. Full article

Laminosioptes cysticola (Vizioli, 1870), a tissue-dwelling mite responsible for nodular acariasis in birds, was identified from two hens reared in a rural backyard flock in Umbria, Italy. Adult mites were found in the subcutaneous tissue and on the serosal surface of various internal organs. Larval and first- and second-stage nymphal forms were observed beneath the skin and near the trachea and esophageal serosa. By comparing the existing literature with that reported in the present study, we propose a hypothetical reconstruction of the parasite’s life cycle. It is postulated that the entry of L. cysticola occurs through the cervical skin, where adults mate and larviparous females give birth to larvae. These larvae migrate into the loose connective tissues surrounding the trachea and esophagus, where they develop into nymphs. The immature forms then progress along the esophagus and trachea to reach the thoracic and abdominal cavities, colonizing the serosal surfaces of visceral organs. It remains unclear whether, or how, the mites return to the subcutaneous tissues to complete their maturation. Senescent specimens degenerate within the subcutis, where they are encased by a granulomatous inflammatory reaction that leads to the formation of characteristic calcified nodules. Full article