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13 pages, 2421 KiB  
Article
Evaluating the Metrics of Insecticide Resistance and Efficacy: Comparison of the CDC Bottle Bioassay with Formulated and Technical-Grade Insecticide and a Sentinel Cage Field Trial
by Deborah A. Dritz, Mario Novelo and Sarah S. Wheeler
Trop. Med. Infect. Dis. 2025, 10(8), 219; https://doi.org/10.3390/tropicalmed10080219 (registering DOI) - 1 Aug 2025
Viewed by 37
Abstract
Insecticide resistance monitoring is essential for effective mosquito control. This study compared CDC Bottle Bioassays (BBAs) using technical and formulated insecticides (deltamethrin/Deltagard and malathion/Fyfanon EW) against the Culex pipiens complex (Fogg Rd) and Culex tarsalis Coquillett (Vic Fazio). BBAs indicated resistance to deltamethrin [...] Read more.
Insecticide resistance monitoring is essential for effective mosquito control. This study compared CDC Bottle Bioassays (BBAs) using technical and formulated insecticides (deltamethrin/Deltagard and malathion/Fyfanon EW) against the Culex pipiens complex (Fogg Rd) and Culex tarsalis Coquillett (Vic Fazio). BBAs indicated resistance to deltamethrin and emerging resistance to malathion in Fogg Rd, as well as resistance to both in Vic Fazio. Field trials, however, showed high efficacy: Deltagard caused 97.7% mortality in Fogg Rd and 99.4% in Vic Fazio. Fyfanon EW produced 100% mortality in Fogg Rd but only 47% in Vic Fazio. Extended BBA endpoints at 120 and 180 min aligned better with field outcomes. Deltagard achieved 100% mortality at 120 min in both populations; technical deltamethrin reached 85.7% (Fogg Rd) and 83.5% (Vic Fazio) at 180 min. Fyfanon EW and malathion showed similar performance: 100% mortality was achieved in Fogg Rd by 120 min but was lower in Vic Fazio; malathion reached 55%; and Fyfanon EW reached 58.6% by 180 min. Statistical analysis confirmed that BBAs using formulated products better reflected field performance, particularly when proprietary ingredients were involved. These findings support the use of formulated products and extended observation times in BBAs to improve operational relevance and resistance interpretation in addition to detecting levels of insecticide resistance. Full article
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12 pages, 1650 KiB  
Communication
Salsolinol-Containing Senna silvestris Exerts Antiviral Activity Against Hepatitis B Virus
by Alberto Quintero, Maria Maillo, Nelson Gomes, Angel Fernández, Hector R. Rangel, Fabian Michelangeli and Flor H. Pujol
Plants 2025, 14(15), 2372; https://doi.org/10.3390/plants14152372 (registering DOI) - 1 Aug 2025
Viewed by 46
Abstract
Several natural products have been shown to display antiviral activity against the hepatitis B virus (HBV), among a number of other viruses. In a previous study, the hydro-alcoholic extracts (n = 66) of 31 species from the Venezuelan Amazonian rain forest were tested [...] Read more.
Several natural products have been shown to display antiviral activity against the hepatitis B virus (HBV), among a number of other viruses. In a previous study, the hydro-alcoholic extracts (n = 66) of 31 species from the Venezuelan Amazonian rain forest were tested on the hepatoma cell line HepG2.2.15, which constitutively produces HBV. One of the species that exerted inhibitory activity on HBV replication was Senna silvestris. The aim of this study was the bioassay-guided purification of the ethanol fraction of leaves of S. silvestris, which displayed the most significant inhibitory activity against HBV. After solvent extraction and two rounds of reverse-phase HPLC purification, NMR analysis identified salsolinol as the compound that may exert the desired antiviral activity. The purified compound exerted inhibition of both HBV DNA and core HBV DNA. Pure salsolinol obtained from a commercial source also displayed anti-HBV DNA inhibition, with an approximate MIC value of 12 µM. Although salsolinol is widely used in Chinese traditional medicine to treat congestive heart failure, it has also been associated with Parkinson’s disease. More studies are warranted to analyze the effect of changes in its chemical conformation, searching for potent antiviral, perhaps dual agents against HBV and HIV, with reduced toxicity. Full article
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36 pages, 3621 KiB  
Review
Harnessing Molecular Phylogeny and Chemometrics for Taxonomic Validation of Korean Aromatic Plants: Integrating Genomics with Practical Applications
by Adnan Amin and Seonjoo Park
Plants 2025, 14(15), 2364; https://doi.org/10.3390/plants14152364 - 1 Aug 2025
Viewed by 219
Abstract
Plant genetics and chemotaxonomic analysis are considered key parameters in understanding evolution, plant diversity and adaptation. Korean Peninsula has a unique biogeographical landscape that supports various aromatic plant species, each with considerable ecological, ethnobotanical, and pharmacological significance. This review aims to provide a [...] Read more.
Plant genetics and chemotaxonomic analysis are considered key parameters in understanding evolution, plant diversity and adaptation. Korean Peninsula has a unique biogeographical landscape that supports various aromatic plant species, each with considerable ecological, ethnobotanical, and pharmacological significance. This review aims to provide a comprehensive overview of the chemotaxonomic traits, biological activities, phylogenetic relationships and potential applications of Korean aromatic plants, highlighting their significance in more accurate identification. Chemotaxonomic investigations employing techniques such as gas chromatography mass spectrometry, high-performance liquid chromatography, and nuclear magnetic resonance spectroscopy have enabled the identification of essential oils and specialized metabolites that serve as valuable taxonomic and diagnostic markers. These chemical traits play essential roles in species delimitation and in clarifying interspecific variation. The biological activities of selected taxa are reviewed, with emphasis on antimicrobial, antioxidant, anti-inflammatory, and cytotoxic effects, supported by bioassay-guided fractionation and compound isolation. In parallel, recent advances in phylogenetic reconstruction employing DNA barcoding, internal transcribed spacer regions, and chloroplast genes such as rbcL and matK are examined for their role in clarifying taxonomic uncertainties and inferring evolutionary lineages. Overall, the search period was from year 2001 to 2025 and total of 268 records were included in the study. By integrating phytochemical profiling, pharmacological evidence, and molecular systematics, this review highlights the multifaceted significance of Korean endemic aromatic plants. The conclusion highlights the importance of multidisciplinary approaches including metabolomics and phylogenomics in advancing our understanding of species diversity, evolutionary adaptation, and potential applications. Future research directions are proposed to support conservation efforts. Full article
(This article belongs to the Special Issue Applications of Bioinformatics in Plant Science)
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16 pages, 1659 KiB  
Article
Ricinus communis L. Leaf Extracts as a Sustainable Alternative for Weed Management
by Aline Mazoy Lopes, Lucas Kila Ribeiro, Maurício Ricardo de Melo Cogo, Lucas Mironuk Frescura, Marcelo Barcellos da Rosa, Alex Schulz, Flávio Dias Mayer, Ederson Rossi Abaide, Marcus Vinícius Tres and Giovani Leone Zabot
Sustainability 2025, 17(15), 6942; https://doi.org/10.3390/su17156942 (registering DOI) - 30 Jul 2025
Viewed by 158
Abstract
Weeds pose a significant challenge to agricultural productivity, requiring control strategies that are both effective and environmentally sustainable. Therefore, this study evaluated the inhibitory potential of aqueous extracts from Ricinus communis L. leaves to manage the weeds Oryza sativa L. (weedy rice) and [...] Read more.
Weeds pose a significant challenge to agricultural productivity, requiring control strategies that are both effective and environmentally sustainable. Therefore, this study evaluated the inhibitory potential of aqueous extracts from Ricinus communis L. leaves to manage the weeds Oryza sativa L. (weedy rice) and Cyperus ferax. Extracts were obtained through pressurized liquid extraction using water as the solvent. Bioassays were conducted during pre- and post-emergence stages by foliar spraying 15 and 30 days after sowing (DAS). The effect of extraction time (1–30 min) on inhibitory efficacy was also assessed. Chemical profiles of the extracts were characterized using high-performance liquid chromatography. The extracts significantly inhibited seed germination, with suppression rates reaching 92.7%. Plant growth was also diminished, particularly with earlier treatments (at 15 DAS), resulting in reductions of up to 32% and 53% in shoot length, and 69% and 73% in total dry mass for O. sativa L. and C. ferax, respectively. Mortality rates of O. sativa L. and C. ferax reached 64% and 58%, respectively. Phenolic compounds were identified in the extracts, and higher concentrations were observed at shorter extraction times. These findings underscore the potential of R. communis L. leaf extracts as an ecologically sustainable alternative for weed management, providing an effective and natural approach that may reduce reliance on synthetic herbicides and mitigate their environmental impact. Full article
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28 pages, 2898 KiB  
Review
Chemical Composition and Biological Activities of Pelargonium sp.: A Review with In Silico Insights into Potential Anti-Inflammatory Mechanism
by Diana Celi, Karina Jimenes-Vargas, António Machado, José Miguel Álvarez-Suárez and Eduardo Tejera
Molecules 2025, 30(15), 3198; https://doi.org/10.3390/molecules30153198 (registering DOI) - 30 Jul 2025
Viewed by 153
Abstract
The Pelargonium genus, encompassing over 280 species, remains markedly underexplored despite extensive traditional use for respiratory, gastrointestinal, and dermatological disorders. This review of aqueous, alcoholic, and hydroalcoholic extracts reveals critical research gaps: only 10 species have undergone chemical characterization, while 17 have been [...] Read more.
The Pelargonium genus, encompassing over 280 species, remains markedly underexplored despite extensive traditional use for respiratory, gastrointestinal, and dermatological disorders. This review of aqueous, alcoholic, and hydroalcoholic extracts reveals critical research gaps: only 10 species have undergone chemical characterization, while 17 have been evaluated for biological activities. Phytochemical analysis identified 252 unique molecules across all studies, with flavonoids emerging as the predominant class (n = 108). Glycosylated derivatives demonstrated superior bioactivity profiles compared to non-glycosylated analogs. Phenolic acids (n = 43) and coumarins (n = 31) represented additional major classes. Experimental studies primarily documented antioxidant, antibacterial, and anti-inflammatory effects, with emerging evidence for antidiabetic, anticancer, and hepatoprotective activities. However, methodological heterogeneity across studies limits comparative analysis and comprehensive understanding. In silico target prediction analysis was performed on 197 high-confidence molecular structures. Glycosylated flavonols, anthocyanidins, flavones, and coumarins showed strong predicted interactions with key inflammatory targets (ALOX15, ALOX5, PTGER4, and NOS2) and metabolic regulators (GSK3A and PI4KB), providing mechanistic support for observed therapeutic effects and suggesting potential applications in chronic inflammatory and metabolic diseases. These findings underscore the substantial therapeutic potential of underexplored Pelargonium species and advocate for systematic research employing untargeted metabolomics, standardized bioassays, and compound-specific mechanistic validation to fully unlock the pharmacological potential of this diverse genus. Full article
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15 pages, 1445 KiB  
Article
Gas Chromatography–Mass Spectrometry Analysis of Artemisia judaica Methanolic Extract: Chemical Composition, Radical Scavenging Potential, Bioherbicidal Activity, and Dengue Vector Control
by Naimah Asid H. Alanazi, Amani Alhejely, Sultan Mohammed Areshi, Hanan K. Alghibiwi, Samiah A. Alhabardi, Mohammed A. Akeel, Amal Naif Alshammari, Sarah Mohammed Alrajeh, Gadah A. Al-Hamoud and Salama A. Salama
Int. J. Mol. Sci. 2025, 26(15), 7355; https://doi.org/10.3390/ijms26157355 - 30 Jul 2025
Viewed by 193
Abstract
Today’s primary challenges include identifying efficient, affordable, and environmentally sustainable substances to serve as raw materials in industrial, agricultural, and medicinal applications. This study aimed to evaluate the chemical composition and biological properties (namely antioxidant and allelopathic activities) of the methanolic extract derived [...] Read more.
Today’s primary challenges include identifying efficient, affordable, and environmentally sustainable substances to serve as raw materials in industrial, agricultural, and medicinal applications. This study aimed to evaluate the chemical composition and biological properties (namely antioxidant and allelopathic activities) of the methanolic extract derived from the above-ground portions of Artemisia judaica collected in Jazan, Saudi Arabia. GC-MS was used to evaluate the chemical composition of the methanolic extract derived from Artemisia judaica. GC-MS analysis revealed a total of 22 volatile compounds in the extract. The most prominent compounds identified were 2-ethylhexanoic acid, 5-hydroxy-6-(1-hydroxyethyl)-2,7-dimethoxynaphtho-quinone, and piperitone. The extract demonstrated strong antioxidant activity in both the DPPH and ABTS radical scavenging assays, comparable to the standard antioxidant ascorbic acid. The IC50 value for the extract was 31.82 mg/mL in the DPPH assay and 39.93 mg/mL in the ABTS testing. Additionally, the extract exhibited dose-dependent inhibition of seed germination, root growth, and shoot growth of the weed Chenopodium murale in allelopathic bioassays. The most significant suppression was observed in shoot growth with an IC50 value of 45.90 mg/mL, which was lower than the IC50 values for root development and seed germination of C. murale, recorded at 56.16 mg/mL and 88.80 mg/mL, respectively. Furthermore, the findings indicated that methanolic extracts had significant lethal toxic effects on the life cycle of Aedes aegypti. Future research will focus on extracting uncontaminated substances and evaluating the biological effects of each specific constituent. Full article
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11 pages, 855 KiB  
Article
A Water Solution from the Seeds, Seedlings and Young Plants of the Corn Cockle (Agrostemma githago) Showed Plant-Growth Regulator Efficiency
by Jana Ambrožič-Dolinšek, Vid Golič, Víctor Rouco Saco, Petra Peranić, Veno Jaša Grujić and Terezija Ciringer
Plants 2025, 14(15), 2349; https://doi.org/10.3390/plants14152349 - 30 Jul 2025
Viewed by 211
Abstract
Corn cockle (Agrostemma githago L. (Lychnis githago (L.) Scop.)) is the main ingredient in some plant preparations for biostimulation in agriculture, and it elicits many positive responses. In our study, we attempted to determine if the fresh and dry plant material [...] Read more.
Corn cockle (Agrostemma githago L. (Lychnis githago (L.) Scop.)) is the main ingredient in some plant preparations for biostimulation in agriculture, and it elicits many positive responses. In our study, we attempted to determine if the fresh and dry plant material of A. githago contained auxin-like and cytokinin-like growth regulators (PGRs). Cucumis and mung bean bioassays were used to determine the presence of auxin-like PGRs and Cucumis and Triticum bioassays were used to determine the presence of cytokinin-like PGRs. A water solution derived from the crushed, homogenized and extracted seeds, fresh and dry seedlings, and fresh and dry young plants showed auxin-like activity in both bioassays. The activity in the Cucumis bioassay corresponded to 0.5 to 2 mg L−1 of Indole-3-butyric acid (IBA), and in the mung bean bioassay, the activity corresponded to 0.5 to 4 mg L−1 of IBA. While the same water solutions showed weak or no cytokinin-like activity in the Cucumis cotyledon expansion bioassay, and they showed an activity of approximately 0.5 to 1 mg L−1 of 6-Benzylaminopurine (BAP) in the Triticum bioassay. An LC-MS analysis confirmed the presence of free auxins, low levels of or no auxin analogues, a small amount of free cytokinins and a higher level of their cytokinin analogues in the samples, seeds, dry seedlings and young plants of A. githago, which was likely related to the fine-tuning between the free and analogue forms of the PGRs in the water solutions used in the experiments. Full article
(This article belongs to the Section Plant Development and Morphogenesis)
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13 pages, 239 KiB  
Article
In Vitro Detection of Acaricide Resistance in Hyalomma Species Ticks with Emphasis on Farm Management Practices Associated with Acaricide Resistance in Abu Dhabi, United Arab Emirates
by Shameem Habeeba, Yasser Mahmmod, Hany Mohammed, Hashel Amer, Mohamed Moustafa, Assem Sobhi, Mohamed El-Sokary, Mahmoud Hussein, Ameer Tolba, Zulaikha Al Hammadi, Mohd Al Breiki and Asma Mohamed Shah
Vet. Sci. 2025, 12(8), 712; https://doi.org/10.3390/vetsci12080712 - 29 Jul 2025
Viewed by 220
Abstract
Acaricide usage has led to the growing problem of resistance in ticks. A heavy tick burden and the presence of ticks on animals throughout the year, despite the monthly application of acaricides, in farms in the United Arab Emirates formed the motivation for [...] Read more.
Acaricide usage has led to the growing problem of resistance in ticks. A heavy tick burden and the presence of ticks on animals throughout the year, despite the monthly application of acaricides, in farms in the United Arab Emirates formed the motivation for this study. The objectives of this research were as follows: (a) to assess the acaricide resistance status of the most prevalent tick Hyalomma spp. to widely used acaricides Cypermethrin and Deltamethrin; (b) to identify the association of farm management practices and farm-level risk factors with the failure of tick treatment (acaracide resistance). A total of 1600 ticks were collected from 20 farms located in three different regions of Abu Dhabi Emirate including Al Ain (n = 10), Al Dhafra (n = 5), and Abu Dhabi (n = 5). The ticks were subjected to an in vitro bioassay adult immersion test (AIT) modified with a discriminating dose (AIT-DD) against commercial preparations of Cypermethrin and Deltamethrin. A questionnaire was designed to collect metadata and information on farm management and the farm-level risk factors associated with routine farm practices relating to the treatment and control of tick and blood parasite infections in camels and small ruminant populations. Hyalomma anatolicum and Hyalomma dromedarii were identified among the collected ticks, with H. anatolicum being the most prevalent tick species (70%) in the present study. The test results of the in vitro bioassay revealed varied emerging resistance to both of the acaricides in the majority of the three regions; fully susceptible tick isolates with zero resistance to Deltamethrin were recorded in one farm at Al Ain and two farms in the Abu Dhabi region. A questionnaire analysis showed that the failure of tick treatment in farms varied with the presence or absence of vegetation areas, types of animal breeds, and management practices. This study reports the emergence of resistance in ticks to Cypermethrin and Deltamethrin across the Abu Dhabi Emirate, indicating a strict warning for the cautious use of acaricides. There is also a need to improve awareness about sound tick management and control practices among farm owners through a multidisciplinary approach adopting integrated pest management strategies that engage farmers, veterinarians, and policy makers. Full article
(This article belongs to the Topic Ticks and Tick-Borne Pathogens)
25 pages, 6142 KiB  
Article
Cancer Chemopreventive Potential of Claoxylon longifolium Grown in Southern Thailand: A Bioassay-Guided Isolation of Vicenin 1 as the Active Compound and In Silico Studies on Related C-Glycosyl Flavones
by Chuanchom Khuniad, Lutfun Nahar, Anupam D. Talukdar, Rajat Nath, Kenneth J. Ritchie and Satyajit D. Sarker
Molecules 2025, 30(15), 3173; https://doi.org/10.3390/molecules30153173 - 29 Jul 2025
Viewed by 271
Abstract
Claoxylon longifolium (Euphorbiaceae) is an indigenous vegetable that has been used in southern Thai traditional medicine and cuisine. A bioassay-guided approach was adopted to investigate the phytochemicals and chemopreventive potential of C. longifolium leaves and stems. Phytochemical investigation of the active MeOH fractions [...] Read more.
Claoxylon longifolium (Euphorbiaceae) is an indigenous vegetable that has been used in southern Thai traditional medicine and cuisine. A bioassay-guided approach was adopted to investigate the phytochemicals and chemopreventive potential of C. longifolium leaves and stems. Phytochemical investigation of the active MeOH fractions afforded six known compounds, including caffeic acid (1), isovitexin (2), and vicenins 1–3 (3–5) from leaves and hexadecanoic acid methyl ester (6) from stems. Their structures were determined by spectroscopic means. Ten constituents were tentatively identified from the oily fractions of stems by GC-MS. Non-cytotoxic concentrations of compounds 16 were identified using the MTT cell viability assay. The ability of compounds 16 at non-cytotoxic concentrations to induce Nrf2 activation, correlating to their potential chemopreventive properties, was determined using a luciferase reporter assay in the AREc32 cell line. Only vicenin 1 (3) was considered to be a potent chemopreventive compound, as it increased luciferase activity by 2.3-fold. In silico studies on compounds 25 and vitexin (16) revealed the potential of these compounds as cancer chemopreventive and chemotherapeutic agents. This study provides the first report on the chemopreventive properties of C. longifolium. All identified and isolated compounds are reported here for the first time from this species. Full article
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15 pages, 2391 KiB  
Article
Host-Seeking and Acceptance Behaviour of Plodia interpunctella (Lepidoptera: Pyralidae) Larvae in Response to Volatile Compounds Emitted by Amaranth
by Mariana Cruz-Díaz, Humberto Reyes-Prado, Víctor R. Castrejón-Gómez and Paola Rossy García-Sosa
Agriculture 2025, 15(15), 1637; https://doi.org/10.3390/agriculture15151637 - 29 Jul 2025
Viewed by 226
Abstract
In this study, the seeking behaviour and food acceptance of larvae of Plodia interpunctella Hübner (Lepidoptera: Pyralidae) were analysed under laboratory conditions. Larval orientation and feeding preferences were assessed using a selection arena for neonate larvae and a four-way olfactometer for third-instar larvae. [...] Read more.
In this study, the seeking behaviour and food acceptance of larvae of Plodia interpunctella Hübner (Lepidoptera: Pyralidae) were analysed under laboratory conditions. Larval orientation and feeding preferences were assessed using a selection arena for neonate larvae and a four-way olfactometer for third-instar larvae. Stimulants included amaranth bars with additives (honey and chocolate) and natural amaranth (toasted grain only). The results showed that amaranth volatiles influence the orientation and feeding behaviour of this polyphagous insect. A marked preference for sugar-rich foods was observed, with amaranth with honey and amaranth with chocolate being the food sources most frequently chosen by the neonate larvae. These individuals exhibited a gregarious feeding behaviour and did not engage in cannibalism. The third-instar larvae also showed a preference for sweet food but were more attracted to the amaranth–additive combination. In the four-way olfactometer bioassays, chocolate was the most frequently chosen stimulus, while cellophane did not differ significantly from air. An analysis of volatile compounds by gas chromatography mass spectrometry (GC-MS) revealed that amaranth with chocolate releases more volatile compounds (16) compared with honey (12) and natural amaranth (6), suggesting that these volatiles could possibly influence the larvae’s choice of food source. Full article
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12 pages, 418 KiB  
Article
Biocontrol Potential of a New Beauveria varroae Strain Isolated from an Urban Ecosystem Against Two Species of Noctuidae Pests
by Spiridon Mantzoukas, Vasileios Papantzikos, Ioannis Lagogiannis, Panagiotis A. Eliopoulos and George Patakioutas
Crops 2025, 5(4), 49; https://doi.org/10.3390/crops5040049 - 29 Jul 2025
Viewed by 143
Abstract
Entomopathogenic fungi are among the most promising non-chemical alternatives for the control of many serious phytophagous insect pests, such as moth species. The present research investigates the use of the little-studied entomopathogenic fungus Beauveria varroae as a biocontrol agent against the notorious pests [...] Read more.
Entomopathogenic fungi are among the most promising non-chemical alternatives for the control of many serious phytophagous insect pests, such as moth species. The present research investigates the use of the little-studied entomopathogenic fungus Beauveria varroae as a biocontrol agent against the notorious pests Helicoverpa armigera and Sesamia nonagrioides in laboratory conditions. Conidial suspensions of B. varroae were prepared at 103-104-105-106-107-108 conidia/mL to assess their insecticidal potential. In this study, we used 100 3rd-instar larvae for each concentration. During the lab bioassays, almost complete mortality of 35–96.6% was recorded for H. armigera larvae and 40–96.6% for S. nonagrioides larvae 10 days after exposure. The lethal effect of the entomopathogen was related to both dose and exposure time of the entomopathogen, with higher concentrations resulting in increased mortality. The survival effect of S. nonagrioides and H. armigera larvae was dependent on the hazard effect of the used dose and the exposure time. These findings indicate that B. varroae has potential as a biocontrol agent. Further research will elucidate this new isolate and optimize application methods in field conditions. Full article
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16 pages, 7614 KiB  
Article
Untangling the Toxicity Dilemma of the Orbetello Lagoon Sediments in Paracentrotus lividus Bioassay: Trace Metals vs. Ammonium
by Davide Sartori, Simona Macchia, Giorgio Tranchida, Paolo Altemura, Vincenzo Tancredi, Alice Scuderi, Maria Elena Piccione, Stefano Ferrari and Andrea Gaion
Nitrogen 2025, 6(3), 62; https://doi.org/10.3390/nitrogen6030062 - 28 Jul 2025
Viewed by 252
Abstract
This study assesses sediment toxicity in the historically contaminated Orbetello Lagoon (southern Tuscany) using Paracentrotus lividus embryo development bioassays. Elutriates from 15 sites were analysed for trace metals, organic matter, and ammonium. Despite elevated mercury concentrations, toxicity did not consistently correlate with metal [...] Read more.
This study assesses sediment toxicity in the historically contaminated Orbetello Lagoon (southern Tuscany) using Paracentrotus lividus embryo development bioassays. Elutriates from 15 sites were analysed for trace metals, organic matter, and ammonium. Despite elevated mercury concentrations, toxicity did not consistently correlate with metal levels. Instead, Principal Component Analysis (PCA) identified ammonium as a key driver of developmental toxicity, suggesting that it significantly influences both biological effects and metal bioavailability. These results demonstrate that ammonium, often overlooked, can confound sediment toxicity assessments and should be integrated into risk evaluation frameworks for coastal systems affected by legacy pollution. Full article
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27 pages, 7908 KiB  
Article
Deciphering Cowpea Resistance to Potyvirus: Assessment of eIF4E Gene Mutations and Their Impact on the eIF4E-VPg Protein Interaction
by Fernanda Alves de Andrade, Madson Allan de Luna-Aragão, José Diogo Cavalcanti Ferreira, Fernanda Freitas Souza, Ana Carolina da Rocha Oliveira, Antônio Félix da Costa, Francisco José Lima Aragão, Carlos André dos Santos-Silva, Ana Maria Benko-Iseppon and Valesca Pandolfi
Viruses 2025, 17(8), 1050; https://doi.org/10.3390/v17081050 - 28 Jul 2025
Viewed by 345
Abstract
Cowpea (Vigna unguiculata) is a crop of significant socioeconomic importance, particularly in the semi-arid regions of Africa and America. However, its productivity has been adversely affected by viral diseases, including the cowpea aphid-borne mosaic virus (CABMV), a single-stranded RNA virus. It [...] Read more.
Cowpea (Vigna unguiculata) is a crop of significant socioeconomic importance, particularly in the semi-arid regions of Africa and America. However, its productivity has been adversely affected by viral diseases, including the cowpea aphid-borne mosaic virus (CABMV), a single-stranded RNA virus. It is known that the VPg protein interacts with the host’s translation initiation factor (eIF4E), promoting viral replication. This study aimed to investigate the relationship between mutations in the cowpea eIF4E gene and resistance to CABMV. Twenty-seven cultivars were screened by PCR and bioassays for presence/absence of mutations associated with resistance or susceptibility to Potyviruses. Of the cultivars with mutations previously associated with susceptibility, 88.24% exhibited viral symptoms, while 62.5% associated with resistance remained asymptomatic. The in silico analyses revealed that non-synonymous mutations (Pro68Arg, Gly109Arg) alter the structure of the eIF4E protein, reducing its affinity to VPg. Molecular dynamics simulations also pointed to an enhanced structural stability of eIF4E in resistant cultivars and reinforced, for the first time, key mutations and the functional role of the eIF4E gene in resistance to CABMV in cowpea. Our results offer valuable insights for virus disease management and for genetic improvement programs for this important crop. Full article
(This article belongs to the Special Issue Viral Manipulation of Plant Stress Responses)
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15 pages, 1118 KiB  
Article
Identification of Novel Bioactive Molecules in Black Chiloe’s Giant Garlic (Allium ampeloprasum L.) by Green Microwave-Assisted Extraction and Effect-Directed Analysis Using High-Performance Thin Layer Chromatography-Bioassay and Mass Spectrometry
by Joaquín Fernández-Martínez, David Arráez-Román, Darlene Peterssen, Gerald Zapata, Karem Henríquez-Aedo and Mario Aranda
Antioxidants 2025, 14(8), 913; https://doi.org/10.3390/antiox14080913 - 25 Jul 2025
Viewed by 352
Abstract
Black Chiloe’s giant garlic is a functional food produced by a mild Maillard reaction that contains relevant bioactive molecules like organosulfur compounds (OSCs) and (poly)phenols (PPs). Compared with raw garlic, black garlic has a higher content of PPs and S-allyl cysteine (SAC), a [...] Read more.
Black Chiloe’s giant garlic is a functional food produced by a mild Maillard reaction that contains relevant bioactive molecules like organosulfur compounds (OSCs) and (poly)phenols (PPs). Compared with raw garlic, black garlic has a higher content of PPs and S-allyl cysteine (SAC), a key OSC due to its bioactivities. The objective of the present work was to optimize by chemometric tools a green microwave-assisted extraction (MAE) of SAC and PPs present in black Chiloe’s giant garlic to detect and identify novel bioactive molecules with antioxidant and/or inhibitory activities over cyclooxygenase, α-glucosidase, and acetylcholinesterase enzymes. The MAE factors were optimized using a central composite design, establishing optimal PP and SAC yields at 67 °C, 0% ethanol, 12 min and 30 °C, 40% ethanol, 3 min, respectively. PP and SAC values were 9.19 ± 0.18 mg GAE/g DW and 2.55 ± 0.10 mg SAC/g DW. Applying effect-directed analysis using high-performance thin layer chromatography-bioassay and mass spectrometry, the bioactive molecules present in the MAE extract with antioxidant and inhibitory activities over cyclooxygenase, α-glucosidase, and acetylcholinesterase enzymes were identified as N-fructosyl-glutamyl-S-(1-propenyl)cysteine, N-fructosyl-glutamylphenylalanine, and Harmane. Full article
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12 pages, 1599 KiB  
Article
CRISPR/Cas12a-Chemiluminescence Cascaded Bioassay for Amplification-Free and Sensitive Detection of Nucleic Acids
by Xiaotian Guan, Peizheng Wang, Yi Wang and Shuqing Sun
Biosensors 2025, 15(8), 479; https://doi.org/10.3390/bios15080479 - 24 Jul 2025
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Abstract
The CRISPR/Cas system has attracted increasing attention in accurate nucleic acid detection. Herein, we reported a CRISPR/Cas12a-chemiluminescence cascaded bioassay (CCCB) for the amplification-free and sensitive detection of human papillomavirus type 16 (HPV-16) and parvovirus B19 (PB-19). A magnetic bead (MB)-linking single-stranded DNA (LssDNA)-alkaline [...] Read more.
The CRISPR/Cas system has attracted increasing attention in accurate nucleic acid detection. Herein, we reported a CRISPR/Cas12a-chemiluminescence cascaded bioassay (CCCB) for the amplification-free and sensitive detection of human papillomavirus type 16 (HPV-16) and parvovirus B19 (PB-19). A magnetic bead (MB)-linking single-stranded DNA (LssDNA)-alkaline phosphatase (ALP) complex was constructed as the core component of the bioassay. During the detection process, the single-stranded target DNA was captured and enriched by LssDNA and then activated the trans-cleavage activity of Cas12a. Due to the Cas12a-mediated cleavage of LssDNA, ALP was released from the MB, subsequently catalyzing the substrate to generate a chemiluminescence (CL) signal. Given the cascade combination of CRISPR/Cas12a with the CL technique, the limits of detection for HPV-16 and PB-19 DNA were determined as 0.14 pM and 0.37 pM, respectively, and the whole detection could be completed within 60 min. The practicality and reliability of the platform were validated through target-spiked clinical specimens, and the recovery rate was 93.4–103.5%. This dual-amplification strategy—operating without target pre-amplification—featured high specificity, low contamination risk, facile preparation, and robust stability. It provides a novel approach for sensitive nucleic acid detection, with the potential for rapid extension to the diagnosis of various infectious diseases. Full article
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