Interactions Between Plants and Fungal Networks: From Rhizosphere Processes to Ecosystem Functioning

A special issue of Plants (ISSN 2223-7747).

Deadline for manuscript submissions: closed (31 July 2026) | Viewed by 1198

Editor

Special Issue Information

Dear Colleagues,

Fungi play a pivotal role in shaping plant health, productivity, and ecosystem stability through complex symbiotic and associative interactions. This Special Issue, “Interactions Between Plants and Fungal Networks: From Rhizosphere Processes to Ecosystem Functioning,” aims to highlight recent advances in understanding the multifaceted relationships between plants and their fungal partners. We welcome studies exploring the ecological, physiological, and molecular aspects of interactions involving mycorrhizal fungi, fungal endophytes, and dark-septate endophytes, as well as their interplay with other soil microorganisms such as bacteria and archaea. Contributions addressing the roles of fungal networks in nutrient cycling, stress tolerance, and soil structure formation are encouraged, along with research integrating multi-omics, microscopy, and ecological modeling approaches. By bringing together studies from diverse ecosystems and experimental frameworks, this Special Issue seeks to deepen our understanding of how fungal–plant–microbe interactions shape plant performance and ecosystem functioning under changing environmental conditions.

Dr. Mohamed Hijri
Guest Editor

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Keywords

  • plant–fungal interactions
  • mycorrhizal fungi
  • fungal endophytes
  • dark-septate endophytes
  • rhizosphere microbiome
  • microbial networks
  • soil–plant interactions
  • ecosystem functioning
  • stress tolerance
  • multi-omics approaches

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Published Papers (1 paper)

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Research

16 pages, 5538 KB  
Article
Morphological Characterization and Metabolomic Analysis of the Inhibitory Effects of Pleurotus ostreatus Mycelium on Triticum aestivum L. Growth and Development
by Weiliang Qi, Jianzhao Qi, Zhilong Yao and Minglei Li
Plants 2026, 15(8), 1232; https://doi.org/10.3390/plants15081232 - 16 Apr 2026
Viewed by 767
Abstract
With the continuous expansion of Pleurotus ostreatus cultivation, substantial quantities of post-harvest spent mushroom substrate (SMS) are generated. Improper disposal of this organic waste poses potential threats to soil health, including contamination and ecological imbalance. Consequently, a rigorous safety assessment is indispensable to [...] Read more.
With the continuous expansion of Pleurotus ostreatus cultivation, substantial quantities of post-harvest spent mushroom substrate (SMS) are generated. Improper disposal of this organic waste poses potential threats to soil health, including contamination and ecological imbalance. Consequently, a rigorous safety assessment is indispensable to support the sustainable and agronomically viable utilization of SMS as a soil amendment. In this study, P. ostreatus SMS was subjected to sterilized and non-sterilized treatments, and a controlled co-culture system integrating P. ostreatus mycelium with wheat was established. This system facilitated a comprehensive evaluation of residual mycelium impacts on wheat growth and development at phenotypic, cytological, and non-targeted metabolomics (LC-MS) levels. Results demonstrated that direct field application of non-sterilized SMS severely compromised wheat performance, inducing root necrosis and significantly reducing grain set. Comparative experiments confirmed that non-sterilized SMS—not its sterilized counterpart—exerted pronounced phytotoxic effects, markedly inhibiting seedling growth and triggering wilting symptoms. To elucidate the temporal dynamics of mycelial interaction, wheat seedlings were inoculated with viable P. ostreatus mycelium and co-cultured for seven days. Under these conditions, the mean root length of the control group (10.82 cm) was approximately threefold that of the treatment group. Histopathological analysis revealed a progressive infection pattern initiating at the root apex and extending basipetally; prolonged exposure ultimately caused complete root system collapse. Scanning electron microscopy further showed extensive mycelial colonization on infected root surfaces, accompanied by characteristic cellular damage—including severe cell wall wrinkling and widespread cell death. LC-MS profiling identified 1867 annotated compounds. Comparative analysis revealed significant dysregulation of secondary metabolism, with 495 metabolites upregulated and 419 metabolites downregulated in the treatment group. Collectively, these findings provide robust evidence that unprocessed P. ostreatus SMS poses tangible agronomic risks upon direct soil application. This study establishes a critical scientific foundation for developing safe, evidence-based protocols for the valorization and integrated management of SMS. Full article
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