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Volume 13
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Article

Genome-Wide Association for Morphological and Agronomic Traits in Phaseolus vulgaris L. Accessions

by
Stephanie Mariel Alves
1,
Giselly Figueiredo Lacanallo
2,
Maria Celeste Gonçalves-Vidigal
1,*,
Mariana Vaz Bisneta
1,
Andressa Gonçalves Vidigal Rosenberg
1 and
Pedro Soares Vidigal Filho
1
1
Pós-Graduação em Genética e Melhoramento, Universidade Estadual de Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
2
Departamento de Agronomia, Universidade Estadual de Maringá, Av. Colombo, 5790, Maringá 87020-900, Brazil
*
Author to whom correspondence should be addressed.
Plants 2024, 13(18), 2638; https://doi.org/10.3390/plants13182638
Submission received: 17 August 2024 / Revised: 4 September 2024 / Accepted: 18 September 2024 / Published: 21 September 2024
(This article belongs to the Special Issue Genome-Wide Association Study Accelerates Deciphering of Crop Complex Agronomic Traits)
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Abstract

Exploring genetic resources through genomic analyses has emerged as a powerful strategy to develop common bean (Phaseolus vulgaris L.) cultivars that are both productive and well-adapted to various environments. This study aimed to identify genomic regions linked to morpho-agronomic traits in Mesoamerican and Andean common bean accessions and to elucidate the proteins potentially involved in these traits. We evaluated 109 common bean accessions over three agricultural years, focusing on traits including the grain yield (YDSD), 100-seed weight (SW), number of seeds per pod (SDPD), number of pods per plant (PDPL), first pod insertion height (FPIH), plant height (PLHT), days to flowering (DF), and days to maturity (DPM). Using multilocus methods such as mrMLM, FASTmrMLM, FASTmrEMMA, ISIS EM-BLASSO, and pLARmEB, we identified 36 significant SNPs across all chromosomes (Pv01 to Pv11). Validating these SNPs and candidate genes in segregating populations is crucial for developing more productive common bean cultivars through marker-assisted selection.
Keywords: common bean; GWAS; single nucleotide polymorphism common bean; GWAS; single nucleotide polymorphism

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MDPI and ACS Style

Alves, S.M.; Lacanallo, G.F.; Gonçalves-Vidigal, M.C.; Vaz Bisneta, M.; Vidigal Rosenberg, A.G.; Vidigal Filho, P.S. Genome-Wide Association for Morphological and Agronomic Traits in Phaseolus vulgaris L. Accessions. Plants 2024, 13, 2638. https://doi.org/10.3390/plants13182638

AMA Style

Alves SM, Lacanallo GF, Gonçalves-Vidigal MC, Vaz Bisneta M, Vidigal Rosenberg AG, Vidigal Filho PS. Genome-Wide Association for Morphological and Agronomic Traits in Phaseolus vulgaris L. Accessions. Plants. 2024; 13(18):2638. https://doi.org/10.3390/plants13182638

Chicago/Turabian Style

Alves, Stephanie Mariel, Giselly Figueiredo Lacanallo, Maria Celeste Gonçalves-Vidigal, Mariana Vaz Bisneta, Andressa Gonçalves Vidigal Rosenberg, and Pedro Soares Vidigal Filho. 2024. "Genome-Wide Association for Morphological and Agronomic Traits in Phaseolus vulgaris L. Accessions" Plants 13, no. 18: 2638. https://doi.org/10.3390/plants13182638

APA Style

Alves, S. M., Lacanallo, G. F., Gonçalves-Vidigal, M. C., Vaz Bisneta, M., Vidigal Rosenberg, A. G., & Vidigal Filho, P. S. (2024). Genome-Wide Association for Morphological and Agronomic Traits in Phaseolus vulgaris L. Accessions. Plants, 13(18), 2638. https://doi.org/10.3390/plants13182638

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