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Antibodies, Volume 9, Issue 2

2020 June - 20 articles

Cover Story: Driven by its successes across domains such as computer vision and natural language processing, deep learning has recently entered the field of biology by aiding in cellular image classification, finding genomic connections, and advancing drug discovery. While deep learning techniques have more often been applied to small molecules, new approaches are being developed to apply these same principles of deep learning to biologics, such as antibodies. Both at the sequence and structural level, these approaches are showing a significant improvement over conventional methods and are poised to improve alongside advancements in deep learning in general. View this paper
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Articles (20)

  • Review
  • Open Access
36 Citations
7,936 Views
22 Pages

Human natural antibodies to mammalian carbohydrate antigens (MCA) bind to carbohydrate-antigens synthesized in other mammalian species and protect against zoonotic virus infections. Three such anti-MCA antibodies are: (1) anti-Gal, also produced in O...

  • Opinion
  • Open Access
10 Citations
10,738 Views
12 Pages

Background: The terminology of “sick building syndrome” (SBS), meaning that a person may feel sick in a certain building, but when leaving the building, the symptoms will reverse, is imprecise. Many different environmental hazards may cau...

  • Review
  • Open Access
32 Citations
9,108 Views
12 Pages

Immunoglobulins (IGs) are widely used for the treatment of immunodeficiency syndromes and several autoimmune diseases. In neonates, IGs have been used for the treatment of alloimmune thrombocytopenia, in neonatal infections and in the rare cases of n...

  • Review
  • Open Access
11 Citations
6,936 Views
15 Pages

The specific targeting of dendritic cells (DCs) using antigen-delivering antibodies has been established to be a highly efficient protocol for the induction of tolerance and protection from autoimmune processes in experimental autoimmune encephalomye...

  • Review
  • Open Access
114 Citations
29,553 Views
20 Pages

The development of recombinant therapeutic proteins has been a major revolution in modern medicine. Therapeutic-based monoclonal antibodies (mAbs) are growing rapidly, providing a potential class of human pharmaceuticals that can improve the manageme...

  • Review
  • Open Access
27 Citations
9,032 Views
13 Pages

Antibody phage display (APD) technology has revolutionized the field of immunovirology with its application in viral disease diagnostics and antiviral therapy. This robust and versatile technology allows the expression of an antibody fused to a phage...

  • Article
  • Open Access
13 Citations
4,989 Views
11 Pages

Study of Neuraminidase-Inhibiting Antibodies in Clinical Trials of Live Influenza Vaccines

  • Yulia Desheva,
  • Tatiana Smolonogina,
  • Svetlana Donina and
  • Larisa Rudenko

Background: Currently, the immunogenicity of influenza vaccines is assessed by detecting an increase of hemagglutination inhibition (HI) antibodies. As neuraminidase (NA)-based immunity may be significant in protecting against influenza infection, de...

  • Feature Paper
  • Review
  • Open Access
24 Citations
9,942 Views
15 Pages

Anti-Idiotypic Agonistic Antibodies: Candidates for the Role of Universal Remedy

  • Aliya K. Stanova,
  • Varvara A. Ryabkova,
  • Sergei V. Tillib,
  • Vladimir J. Utekhin,
  • Leonid P. Churilov and
  • Yehuda Shoenfeld

Anti-idiotypic antibodies (anti-IDs) were discovered at the very beginning of the 20th century and have attracted attention of researchers for many years. Nowadays, there are five known types of anti-IDs: α, β, γ, ε, and &del...

  • Article
  • Open Access
10 Citations
5,309 Views
12 Pages

Glomerular Diseases Associated with Malignancies: Histopathological Pattern and Association with Circulating Autoantibodies

  • Sophia Lionaki,
  • Smaragdi Marinaki,
  • Konstantinos Panagiotellis,
  • Ioanna Tsoumbou,
  • George Liapis,
  • Ioanna Vlahadami,
  • Athanasios Tzioufas,
  • Petros Sfikakis and
  • Ioannis Boletis

Aim: Glomerular diseases (GD) associated with malignancies (AM, GDAM) have unique features, which are important to recognize, in the light of the progress made in cancer therapy. We aimed to describe the clinical and histopathological characteristics...

  • Feature Paper
  • Review
  • Open Access
23 Citations
8,686 Views
34 Pages

Therapeutic monoclonal antibodies for the treatment of cancer came of age in 1997, with the approval of anti-CD20 Rituximab. Since then, a wide variety of antibodies have been developed with many different formats and mechanisms of action. Among thes...

  • Article
  • Open Access
34 Citations
12,114 Views
11 Pages

In recent years, site-specific antibody drug conjugates (ADC)s have been in great demand because they have an expanded therapeutic index compared with conventional ADCs. AJICAP™ technology is a chemical conjugation platform to obtain site-specific AD...

  • Article
  • Open Access
12 Citations
6,528 Views
15 Pages

Human cathelicidin LL37 is a cationic antimicrobial peptide active against bacteria and viruses and exerting immune modulatory functions. LL37 can be also a target of autoreactive B- and T-lymphocytes in autoimmune settings. Irreversible post-transla...

  • Concept Paper
  • Open Access
7 Citations
6,187 Views
17 Pages

Adaptive immunity in vertebrates is a complex self-organizing network of molecular interactions. While deep sequencing of the immune-receptor repertoire may reveal clonal relationships, functional interpretation of such data is hampered by the inhere...

  • Review
  • Open Access
62 Citations
19,060 Views
22 Pages

A Review of Deep Learning Methods for Antibodies

  • Jordan Graves,
  • Jacob Byerly,
  • Eduardo Priego,
  • Naren Makkapati,
  • S. Vince Parish,
  • Brenda Medellin and
  • Monica Berrondo

28 April 2020

Driven by its successes across domains such as computer vision and natural language processing, deep learning has recently entered the field of biology by aiding in cellular image classification, finding genomic connections, and advancing drug discov...

  • Article
  • Open Access
6 Citations
5,010 Views
9 Pages

Mapping Immunodominant Antibody Epitopes of Abrin

  • Ron Alcalay,
  • Reut Falach,
  • Yoav Gal,
  • Anita Sapoznikov,
  • Tamar Sabo,
  • Chanoch Kronman and
  • Ohad Mazor

27 April 2020

Abrin, a toxin isolated from the seeds of Abrus precatorius (jequirity pea) is considered a biological threat agent by the Center for Disease Control and Prevention. To date, there is no effective postexposure treatment for abrin poisoning, and effor...

  • Article
  • Open Access
2 Citations
6,314 Views
17 Pages

Ion Binding Properties of a Naturally Occurring Metalloantibody

  • Elinaz Farokhi,
  • Jonathan K. Fleming,
  • M. Frank Erasmus,
  • Aaron D. Ward,
  • Yunjin Wu,
  • Maria G. Gutierrez,
  • Jonathan M. Wojciak and
  • Tom Huxford

16 April 2020

LT1009 is a humanized version of murine LT1002 IgG1 that employs two bridging Ca2+ ions to bind its antigen, the biologically active lipid sphingosine-1-phosphate (S1P). We crystallized and determined the X-ray crystal structure of the LT1009 Fab fra...

  • Article
  • Open Access
5 Citations
5,406 Views
17 Pages

Exploration and Modulation of Antibody Fragment Biophysical Properties by Replacing the Framework Region Sequences

  • Thomas Cnudde,
  • Zineb Lakhrif,
  • Justine Bourgoin,
  • Fanny Boursin,
  • Catherine Horiot,
  • Corinne Henriquet,
  • Anne di Tommaso,
  • Matthieu Olivier Juste,
  • Isabella Gizzi Jiacomini and
  • Nicolas Aubrey
  • + 3 authors

In order to increase the successful development of recombinant antibodies and fragments, it seems fundamental to enhance their expression and/or biophysical properties, such as the thermal, chemical, and pH stabilities. In this study, we employed a m...

  • Article
  • Open Access
8 Citations
8,755 Views
17 Pages

Fast Confirmation of Antibody Identity by MALDI-TOF MS Fingerprints

  • Georg Tscheuschner,
  • Timm Schwaar and
  • Michael G. Weller

Thousands of antibodies for diagnostic and other analytical purposes are on the market. However, it is often difficult to identify duplicates, reagent changes, and to assign the correct original publications to an antibody. This slows down scientific...

  • Communication
  • Open Access
7 Citations
7,836 Views
17 Pages

Molecular Interaction Characterization Strategies for the Development of New Biotherapeutic Antibody Modalities

  • Xiangdan Wang,
  • Minh Michael Phan,
  • Ji Li,
  • Herman Gill,
  • Simon Williams,
  • Nidhi Gupta,
  • Valerie Quarmby and
  • Jihong Yang

The characterization of target binding interactions is critical at each stage of antibody therapeutic development. During early development, it is important to design fit-for-purpose in vitro molecular interaction characterization (MIC) assays that a...

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Antibodies - ISSN 2073-4468