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4 October 2026

17 Pages

Responses of Soil Properties and Yield to Crop Residue Return Under Different Cropping Systems in Rainfed Cropland of Northeast China

,
,
and
1
State Key Laboratory of Maize Bio-Breeding, China Agricultural University, Beijing 100193, China
2
College of Agronomy and Biotechnology, China Agricultural University, Beijing 100193, China
3
Key Laboratory of Farming System, Ministry of Agriculture and Rural Affairs of China, Beijing 100193, China
*
Author to whom correspondence should be addressed.

Abstract

Crop residue return is widely used to improve soil conditions in rainfed croplands, but its effects may differ among soil properties and cropping systems. This study evaluated the field performance of crop residue return with three-year consecutive observations in rainfed Northeast China. The field treatments included crop residue removal (R0) and crop residue return (RR) for maize monoculture, fixed maize–soybean strip intercropping, and rotational maize–soybean strip intercropping. The results show that RR significantly decreased soil pH (p < 0.001) and increased available potassium (p < 0.01), particularly in the 0–20 cm soil layer, where mean pH decreased from 8.05 under R0 to 7.59 under RR and available potassium increased from 98.6 to 109.1 mg kg−1. In contrast, bulk density, soil water content, soil organic carbon, total nitrogen, and the C:N ratio showed weaker or less consistent responses across soil depths, cropping systems, and sampling years. Crop yield responses differed between crops. RR significantly increased maize yield overall, whereas no significant overall effect was detected for soybean yield. Overall, crop residue return primarily affected surface-soil pH and potassium availability during the three-year experiment, while its yield effect differed between maize and soybean.

1. Introduction

Rainfed crops are strongly constrained by seasonal precipitation and soil water storage [1], leading to low water-use efficiency [2]. Surface residue return (RR) has been widely reported to improve the near-surface soil environment by increasing infiltration, protecting soil aggregates, and reducing evaporative water loss [3,4,5]. Additionally, RR was also proved to enhance soil organic carbon (SOC) due to organic inputs to cropland soils [6,7]. In dryland systems, RR can increase precipitation storage and support crop production under water-limited conditions [8]. In practice, RR has been widely adopted to regulate near-surface soil conditions in rainfed croplands with limited water and nutrient availability [9,10].
In Northeast China, maintaining crop production is particularly challenging under rainfed conditions, where climate-related yield losses are concentrated and maize and soybean production is strongly influenced by regional soil and climatic conditions [11,12]. At the global scale, evidence further shows that the effects of crop residue retention on soil properties and crop productivity are strongly context-dependent, with their magnitude regulated by soil conditions, climate, nutrient management, and cropping practices [13,14]. The effects of crop residue return vary with residue-management practices, residue input, fertilization regime, soil and climatic conditions, and treatment duration [15,16,17]. Long-term residue return can gradually increase SOC stocks and soil nutrient availability, although the magnitude of these cumulative responses depends on annual carbon inputs, initial soil conditions, and nutrient management [18,19]. During the initial years of residue return, responses are more likely to emerge in dynamic surface-soil properties associated with residue decomposition, nutrient release, microbial turnover, and soil-water regulation, whereas detectable changes in bulk SOC, TN, and crop yield may remain limited or variable [20,21]. Initial responses to residue return are therefore expected to occur primarily in topsoil processes associated with residue decomposition, nutrient release, and microbial activity [22,23]. These processes can rapidly alter labile carbon pools, microbial biomass, available nutrients, and soil water conditions [24,25,26]. Among these responses, soil P availability is particularly sensitive to RR because straw decomposition can release P and accelerate microbial P turnover [27,28,29]. Residue return can also redistribute P among inorganic and organic fractions, thereby altering both immediate P availability and potential P-supply capacity [30,31]. Soil pH may also respond during the initial period of residue return, although the direction and magnitude of this response depend on initial soil pH, buffering capacity, residue chemistry, and nutrient management [32,33]. In comparison with these rapid responses, detectable changes in bulk SOC and TN generally require sustained residue inputs and are strongly regulated by return duration, fertilization regime, and regional soil conditions [34,35,36]. Crop yield responses may also develop at different rates and vary with crop species, residue input, placement method, treatment duration, and background nutrient management [37,38,39]. Therefore, whether short-term crop residue return produces consistent surface-soil responses across contrasting cropping systems, and which soil properties respond most rapidly to residue inputs, remains to be clarified.
Diversified cropping systems have been recommended globally to regulate soil quality and productivity through changes in plant inputs, nutrient acquisition, and belowground biological activity [40,41,42]. Cereal–legume multiple systems (i.e., rotation or intercropping) have been demonstrated to enhance resource use, rhizosphere interactions, and modify soil nutrient availability, pH, and microbial processes [43,44,45]. Determining how diversified cropping systems influence the decomposition and nutrient release of returned crop residues is essential for understanding soil nutrient cycling and optimizing field management [46,47,48]. However, most studies have evaluated residue return within a single cropping system or have focused on long-term changes in soil carbon and crop yield. Consequently, it remains unclear whether early RR responses represent general, reproducible changes in sensitive topsoil indicators or responses that depend on cropping-system context. Comparing maize monoculture, fixed maize–soybean strip intercropping, and rotational maize–soybean strip intercropping therefore provides an opportunity to distinguish common short-term RR responses from responses that depend on cropping-system context.
A three-year field experiment was conducted in rainfed Northeast China to evaluate the effects of RR on soil properties and crop yield across contrasting maize-based cropping systems. Univariate, multivariate, and correlation analyses were combined to identify initial RR responses that recurred across cropping systems and years, along with responses that remained context-dependent. We hypothesized that short-term RR would produce stronger changes in dynamic surface-soil chemical and available nutrient properties than in slower-changing bulk soil properties, while the magnitude of these early responses would vary among cropping systems. This study aimed to determine whether RR produced consistent changes in surface-soil chemical conditions, available nutrient status, soil-property associations, and crop yield during the initial three years under contrasting maize-based cropping systems.

2. Materials and Methods

2.1. Site Description

A field experiment was conducted from spring 2023 to autumn 2025 at Taoli Village (42°07′39″ N, 121°43′49″ E), Fuxin Mongol Autonomous County, northwest Liaoning Province, China, within the National Observation and Research Station for Agricultural Environment. Residue-return treatments had been initiated before planting in 2023, using crop residues produced during the 2022 growing season. The region has a temperate continental monsoon climate, with hot summers and cold, dry winters. The mean annual temperature is 7–8 °C, and the mean annual precipitation is 391 mm. Rainfall is unevenly distributed and is mainly concentrated in the middle and late stages of crop growth. Monthly precipitation and mean air temperature during the 2023–2025 growing seasons are shown in Figure 1.
Figure 1. Monthly precipitation and mean air temperature at the experimental site in Fuxin, Northeast China, during the 2023–2025 growing seasons.
The soil at the experimental site is a cinnamon soil, classified as a Cambisol according to the World Reference Base for Soil Resources (WRB). Baseline soil characterization of the 0–20 cm cultivated layer was based on samples collected from multiple locations across the experimental field. Initial soil properties in the 0–20 cm layer included 14.4 g kg−1 soil organic matter, 0.78 g kg−1 total nitrogen, 45.2 mg kg−1 available nitrogen, 17.4 mg kg−1 available phosphorus, 69.5 mg kg−1 available potassium, and a pH of 7.83. Before establishment of the experiment, the field had been continuously cropped with maize.

2.2. Experimental Design and Crop Management

The experiment was arranged as a randomized complete block design with four spatial blocks, with the six treatment combinations randomly allocated within each block. The three cropping systems were maize monoculture (M), fixed maize–soybean strip intercropping (MS), and rotational maize–soybean strip intercropping (MSR). The two residue-management regimes were residue removal (R0) and crop residue return (RR). This resulted in six treatment combinations: M-R0, M-RR, MS-R0, MS-RR, MSR-R0, and MSR-RR. Each plot measured 7 m × 12 m (84 m2) and contained 24 ridges. The field layout and treatment allocation within the four blocks are shown in Supplementary Figure S1.
The maize–soybean intercropping systems were arranged as alternating 6:6 row strips, with six maize rows and six soybean rows in each strip unit. Row spacing was 50 cm for both crops. In the MS system, the positions of maize and soybean strips remained unchanged across years. In the MSR system, maize and soybean strip positions were rotated annually; strips planted with maize in one year were planted with soybean in the following year, and vice versa.
Crop varieties and planting densities were kept consistent across the corresponding cropping systems. Maize cultivar ‘Dongdan 1331’ was planted at a density of 60,000 plants ha−1, with 50 cm between rows and 33.3 cm between plants. Soybean cultivar ‘Liaodou 32’ was planted at a density of 180,000 plants ha−1, with two plants per hill, 50 cm between rows, and 22.2 cm between hills.
A compound fertilizer containing 17% N, 17% P2O5, and 17% K2O was applied at 675 kg ha−1, providing 114.8 kg N ha−1, 114.8 kg P2O5 ha−1, and 114.8 kg K2O ha−1 on a total land-area basis across all treatments. The fertilizer was band-applied in furrows before planting, and no topdressing fertilizer was applied during the growing seasons. No irrigation was applied from 2023 to 2025, and crop production relied on natural rainfall.
For residue management, all aboveground crop residues were removed after harvest in the R0 treatment. In the RR treatment, only maize residues were returned, whereas soybean residues were removed. To maintain approximately equivalent residue inputs on a plot-area basis across the three cropping systems, additional maize residue was supplied to the MS and MSR plots as needed to compensate for the absence of soybean residue return and to match the residue input used in maize monoculture. Before planting, the maize residues were chopped and spread uniformly over the soil surface as mulch. In each year, residue application and planting were conducted in mid- to late April. Soil sampling was conducted at crop physiological maturity in late September, followed by harvest at the end of September. The returned maize residue contained 42.15% C, 1.52% N, and 1.74 g kg−1 total P, with a C:N ratio of approximately 27.75.
At physiological maturity, border rows were excluded, and several internal rows were randomly selected in each plot, from which 3–5 plants per row were harvested for yield determination. Maize and soybean grains were threshed, and grain yields were expressed on an area basis according to the corresponding planting arrangement. In the intercropping treatments, maize and soybean yields were determined separately according to the area occupied by each crop.

2.3. Soil Sampling and Laboratory Analysis

At crop maturity in each year, soil samples were collected from four depth intervals: 0–10, 10–20, 20–30, and 30–50 cm. The upper 30 cm was sampled at 10 cm intervals to capture near-surface variation associated with residue return, whereas 30–50 cm was sampled as a broader interval to characterize deeper-soil responses. In maize monoculture plots, five soil cores were collected from randomly selected positions within each plot and composited for each depth × plot combination. In maize–soybean intercropping plots, seven soil cores were collected across both maize and soybean strips and composited for each depth × plot combination. Fresh soil samples were passed through a 2 mm sieve and divided into subsamples for soil physicochemical analyses.
Soil water content (SWC) was determined gravimetrically by oven drying fresh soil at 105 °C to constant mass [49]. Bulk density (BD) was determined using the core method [50]. Soil pH was measured in a 2.5:1 water to soil suspension [51]. Soil organic carbon (SOC) was determined by dichromate oxidation and titration [52]. Total nitrogen (TN) was determined by Kjeldahl digestion [53]. Available potassium (AK) was extracted with 1.0 M NH4OAc and measured by flame photometry [54]. Available phosphorus (AP) was extracted with 0.5 M NaHCO3 (pH 8.5) and determined colorimetrically using the molybdenum blue method [55].

2.4. Statistical Analysis

All statistical analyses were conducted in R v4.4.3 using the lme4, lmerTest, emmeans, and vegan packages. Linear mixed-effects models were used to test the effects of cropping system, residue-return treatment, sampling year, soil layer, and their interactions on soil physicochemical properties. Cropping system, residue-return treatment, sampling year, soil layer, and their two- and three-way interactions were treated as fixed effects, while block and plot identity were included as random effects. Fixed effects were assessed using Type III analysis of variance.
Residue-return responses were further quantified within each cropping system, sampling year, and aggregated soil layer using standardized RR–R0 mean differences. For graphical presentation, the original four soil layers were combined into 0–20 and 20–50 cm using depth-weighted averages. Within each block, the RR–R0 difference was calculated, and the mean paired difference across the four blocks was standardized by a common reference SD calculated from all observations of the same indicator within the same aggregated soil layer. The 95% confidence interval was calculated from the block-level paired differences using Student’s t distribution (df = 3) and standardized by the same reference SD. Effects were considered significant when the 95% confidence interval did not overlap zero.
Crop yield was analyzed separately for maize and soybean using linear mixed-effects models. The maize yield model included M, MS, and MSR, whereas the soybean yield model included MS and MSR. Residue-return treatment, sampling year, cropping system, and all two- and three-way interactions were included as fixed effects, with plot identity as a random effect. Estimated marginal means were calculated across years for graphical presentation, and RR–R0 contrasts were estimated within each cropping system from the same mixed-effects model.
Principal component analysis and partial redundancy analysis were performed using standardized soil physicochemical indicators from the 0–20 cm soil layer. For RDA, cropping system, residue treatment, and their interaction were included as constraining variables, with block as a conditioning variable; significance was assessed using 9999 permutations restricted within blocks. Spearman correlation analysis was conducted separately for R0 and RR treatments using three-year-averaged plot-level observations from the 0–20 cm soil layer (n = 12 per treatment) to descriptively examine associations among soil physicochemical properties.

3. Results

3.1. Overall Soil Responses to Residue Return

In the first three years of RR, obvious responses to RR occurred for pH and AK (Table 1). Averaged across cropping systems, years, and soil layers, RR decreased soil pH (F = 179.73, p < 0.001) and increased AK (F = 13.71, p < 0.01), compared to R0. No significant overall effect of RR was detected for BD, SWC, SOC, TN, the C:N ratio, or AP (Table 1). The magnitude of these short-term RR effects varied with year, soil depth, and cropping system.
Table 1. Linear mixed effects model results for soil physicochemical properties under residue return and residue removal.
Significant R × Y interactions were detected for pH (F = 78.83, p < 0.001), AK (F = 5.40, p < 0.01), and AP (F = 14.23, p < 0.001; Table 1). The strongest annual variation was observed for pH (F = 78.83, p < 0.001), followed by AP (F = 14.23, p < 0.001) and AK (F = 5.40, p < 0.01). Significant R × D interactions were detected for BD (F = 4.05, p < 0.01), SOC (F = 8.09, p < 0.001), TN (F = 12.83, p < 0.001), and AP (F = 24.19, p < 0.001). Significant S × R interactions were detected for pH (F = 4.38, p < 0.05) and TN (F = 3.74, p < 0.05), indicating that their responses to RR differed among cropping systems. Significant S × R × Y interactions were detected for pH (F = 7.60, p < 0.001), AK (F = 7.57, p < 0.001), and AP (F = 2.76, p < 0.05), indicating that annual RR responses differed among cropping systems. The RR response of SWC depended jointly on sampling year and soil depth, as indicated by a significant R × Y × D interaction (F = 3.44, p < 0.01). By contrast, neither the overall RR effect nor any interaction involving RR was significant for the C:N ratio (Table 1).

3.2. Responses of Soil Properties to Residue Return Across Soil Depths

In the 0–20 cm soil layer, the most consistent RR responses were detected for pH, AK, and AP, as indicated by the directions and 95% confidence intervals of their standardized effect sizes (Figure 2). RR generally decreased pH and increased AK and AP across cropping systems and years, although the magnitudes and statistical significance of these effects varied among individual combinations. RR also increased SWC and TN in several intercropping treatments, but these positive effects did not recur across all years. The effect sizes of BD, SOC, and the C:N ratio varied in direction among cropping systems and years, and no consistent response to RR was detected across the 0–20 cm soil layer (Figure 2).
Figure 2. Standardized changes of soil physicochemical properties responding to residue return compared to residue removed in the 0–20 cm soil layer. Note: Points represent standardized block-paired RR–R0 mean differences, and horizontal bars indicate 95% confidence intervals based on Student’s t distribution. Positive values indicate higher values under residue return than under residue removal, whereas negative values indicate lower values under residue return. Asterisks indicate estimates whose 95% confidence intervals did not overlap zero. R0, residue removal; RR, residue return; M, maize monoculture; MS, maize–soybean intercropping; MSR, rotational maize–soybean intercropping.
Below 20 cm, the effects of RR were generally weaker and less directionally consistent (Figure 3). Significant positive effect sizes for SWC were detected in specific maize-monoculture and rotational maize–soybean intercropping combinations (Figure 3). Significant negative effect sizes for pH were detected in several maize-monoculture and fixed-intercropping combinations, whereas significant positive effect sizes for AP were detected in several cropping-system × year combinations (Figure 3). The effect sizes of BD, SOC, TN, and the C:N ratio varied in direction among years and cropping systems, and no recurrent response was detected across the 20–50 cm soil layer (Figure 3).
Figure 3. Standardized changes of soil physicochemical properties responding to residue return compared to residue removed in the 20–50 cm soil layer. Note: Points represent standardized block-paired RR–R0 mean differences, and horizontal bars indicate 95% confidence intervals based on Student’s t distribution. Positive values indicate higher values under residue return than under residue removal, whereas negative values indicate lower values under residue return. Asterisks indicate estimates whose 95% confidence intervals did not overlap zero. R0, residue removal; RR, residue return; M, maize monoculture; MS, maize–soybean intercropping; MSR, rotational maize–soybean intercropping.

3.3. Associations Among Soil Properties Under Residue Return

Spearman correlation analysis based on three-year-averaged plot-level observations showed positive and negative associations among soil physicochemical properties under both R0 and RR in the 0–20 cm soil layer (Figure 4). Under R0, associations were mainly observed among TN, AK, AP, pH, SOC, and BD. Under RR, relatively strong associations were observed among BD, SOC, TN, and AK. These correlations were used descriptively and were not interpreted as evidence of differences in correlation structure between R0 and RR.
Figure 4. Spearman correlations among soil physicochemical properties under residue-removal and residue-return treatments in the 0–20 cm soil layer. Note: Spearman correlation analysis was performed separately for the residue-removal treatment (R0) and residue-return treatment (RR) using three-year-averaged plot-level observations from the 0–20 cm soil layer (n = 12 per treatment). (a) R0 treatment; (b) RR treatment. Colors indicate Spearman’s correlation coefficients, with red indicating positive correlations and blue indicating negative correlations. R0, residue removal; RR, residue return; BD, bulk density; SWC, soil water content; SOC, soil organic carbon; TN, total nitrogen; C:N, carbon-to-nitrogen ratio; AK, available potassium; AP, available phosphorus.
Principal component analysis was used to evaluate whether residue return altered the overall profile of soil physicochemical properties in the 0–20 cm layer (Figure 5a). The first two principal components explained 58.6% of the total variation, with PC1 and PC2 accounting for 32.0% and 26.6%, respectively. Along PC1, pH and BD were mainly separated from SWC, C:N ratio, AK, and AP. Along PC2, SOC and TN were mainly separated from AP. These loading patterns indicated that variation in surface-soil properties was mainly associated with gradients of pH, BD, SWC, available nutrients, SOC, and TN.
Figure 5. Multivariate analysis of soil physicochemical properties in the 0–20 cm soil layer based on PCA and RDA. Note: Principal component analysis (PCA) and redundancy analysis (RDA) were performed using standardized soil physicochemical indicators from the 0–20 cm soil layer. (a) PCA ordination showing the variation in soil physicochemical properties in the 0–20 cm soil layer. PC1 and PC2 explained 32.0% and 26.6% of the total variation, respectively. (b) Partial RDA ordination. RDA1 and RDA2 explained 22.6% and 14.8% of the total variation, respectively. Points represent three-year-averaged plot-level observations, colors indicate cropping systems, and shapes indicate residue treatments. Arrows indicate the loading directions of soil physicochemical indicators. R0, residue removal; RR, residue return; BD, bulk density; SWC, soil water content; SOC, soil organic carbon; TN, total nitrogen; C:N, carbon-to-nitrogen ratio; AK, available potassium; AP, available phosphorus.
The PCA ordination showed partial overlap between R0 and RR samples, indicating that residue return did not lead to a complete separation of the overall soil physicochemical profile. However, the distribution of samples and variable loadings was broadly consistent with the single-indicator results, in which residue-return responses were mainly associated with pH, AK, AP, and related soil-property gradients. Therefore, the effect of residue return was reflected more clearly in specific chemical and nutrient-related properties than in a complete shift of the overall soil-property assemblage.
Redundancy analysis further supported this pattern (Figure 5b). The partial RDA model was significant (F = 3.44, p < 0.001), with RDA1 and RDA2 explaining 22.6% and 14.8% of the total variation, respectively. The main variable directions in the RDA ordination were broadly consistent with those in the PCA, with pH and BD oriented away from SWC, AK, AP, SOC, and C:N ratio. Variation in soil physicochemical properties was structured mainly along gradients associated with pH, BD, SWC, and available nutrients, consistent with the patterns observed in the PCA (Figure 5).

3.4. Crop Yield Responses to Residue Return Across Cropping Systems

Maize yield was significantly affected by RR (F = 10.19, p = 0.002), year (F = 53.45, p < 0.001), and cropping system (F = 4.96, p = 0.010; Table 2). The interaction between year and cropping system was also significant (F = 6.80, p < 0.001), whereas the interactions involving RR were not significant. Soybean yield was significantly affected by year (F = 60.32, p < 0.001) and cropping system (F = 5.32, p = 0.040), while no significant overall effect of RR was detected (F = 0.70, p = 0.419).
Table 2. Effects of residue return, year, and cropping system on maize and soybean yields based on linear mixed-effects models.
Across the three experimental years, maize yield was generally higher under RR than under R0 (Figure 6a), consistent with the significant overall effect of RR on maize yield (F = 10.19, p = 0.002; Table 2). In contrast, no significant overall effect of RR was detected for soybean yield (F = 0.70, p = 0.419; Table 2; Figure 6b).
Figure 6. Crop yield under residue-removal and residue-return treatments in maize monoculture and maize–soybean intercropping systems. Note: (a) Maize yield in maize monoculture (M), fixed maize–soybean strip intercropping (MS), and rotational maize–soybean strip intercropping (MSR). (b) Soybean yield in MS and MSR. Bars represent estimated marginal means across the three experimental years, and error bars indicate standard errors. Asterisks indicate significant RR–R0 contrasts within the same cropping system based on estimated marginal means averaged across the three experimental years (* p < 0.05). R0, residue removal; RR, residue return.

4. Discussion

4.1. Short-Term Effects on Soil Chemical and Nutrient of Residue Return

The early influence of RR was concentrated in soil chemical conditions and available nutrient pools, indicating that surface-applied straw initially affected rapidly cycling processes rather than slowly accumulating soil stocks. Straw decomposition can release soluble compounds and readily available nutrients and may stimulate microbial processes involved in nutrient transformation [22,24]. These relatively rapid processes may help explain why early RR responses were more clearly expressed in pH and available nutrients than in bulk soil carbon and nitrogen pools [18,34,35].
Soil pH showed the clearest early response to RR in the present study. Residue inputs can alter soil proton balance through the release of organic compounds and base cations, while their interaction with fertilizer nitrogen further affects acid production and neutralization during decomposition [56]. The direction and persistence of these changes depend on the initial soil acidity, buffering capacity, residue chemistry, and the surrounding nutrient environment [57]. The predominance of negative pH responses therefore identifies soil acidity regulation as one of the earliest and most sensitive expressions of RR under the present field conditions.
The relatively clear AK response and the more variable AP may reflect fundamental differences in the release and transformation of K and P after residue return. Potassium in crop residues is readily released during decomposition and can subsequently enter exchangeable soil pools, although its retention also depends on adsorption, leaching, and aggregate associated organic matter [58,59]. Phosphorus availability is more strongly regulated by biological and geochemical transformations during residue decomposition [60,61,62]. These differences in nutrient-release pathways may help explain the relatively clear AK response and the greater variability of AP responses to RR. The significant year-dependent responses of pH, AK, and AP may also partly reflect interannual differences in rainfall distribution, particularly the higher precipitation during July–September in 2024 (Figure 1).

4.2. Cropping Systems Independent Changes in Soil Properties Under RR

Across the three cropping systems examined, residue return generated a shared early soil signal, with a general decrease in pH and increases in AK and AP; comparable changes in soil acidity have been observed at soil straw interfaces and after sustained straw incorporation [63,64]. The positive AK response is also consistent with the redistribution of residue-derived K among soil pools, although straw inputs may not fully offset K removal by crops under all field conditions [65,66]. Increases in AP under residue return have similarly been associated with alleviated microbial P limitation and enhanced transformation of organic and mineral associated P forms [67,68]. Evidence from different soil and fertilization backgrounds therefore supports the conclusion that cropping systems can regulate the magnitude of soil responses while retaining the common direction of early nutrient changes following residue return [69,70].
The variation in response magnitude among the three cropping systems may reflect differences in crop composition and the soil environment in which the returned maize residues decomposed [71,72]. Initial soil fertility can further modify these responses by altering microbial resource allocation and the turnover and retention of residue-derived C [73,74]. Crop identity also shapes rhizosphere microbial communities and their contribution to residue mineralization, creating distinct biological environments for nutrient transformation after residue return [75,76]. Variation in crop composition and soil biological context can therefore change the strength of soil responses while preserving their general direction across the three cropping systems [77,78].

4.3. Holistic Changes Induced by Short-Term Crop Residue Return

In the present study, the ordination analyses indicated variation in the multivariate patterns of surface-soil properties among treatments, whereas overlap between residue treatments was still evident (Figure 5). Similar changes in soil multifunctionality and interactions among soil properties have been reported following residue inputs, particularly when residue return modifies microbial functions and nutrient cycling processes [79,80]. The strong contributions of pH, AK, and AP indicate that changes in the soil chemical environment and available nutrient pools formed the main axis of this reorganization [81,82]. Residue decomposition simultaneously modifies physicochemical conditions and microbial functions at the soil straw interface, thereby connecting nutrient availability with broader carbon and nutrient transformation processes [83,84]. These linked responses can produce a clear multivariate signal even when several individual soil properties show weak or variable changes [85,86].
In the present study, SOC, TN, and BD showed weak or inconsistent responses to residue return across years and cropping systems (Table 1; Figure 2). Previous studies indicate that detectable changes in SOC, TN, and BD generally require sustained residue inputs because carbon and nitrogen accumulation and soil structural adjustment develop gradually over time [87,88,89,90]. This may explain their relatively weak or inconsistent responses during the first three years of RR. These processes may therefore alter relationships among soil properties before clear changes emerge in bulk C and N pools or soil structural indicators [91,92].

4.4. Crop Yield Responses to Residue Return

In the present study, RR had a significant overall positive effect on maize yield, whereas no significant overall response was detected for soybean yield (Table 2; Figure 6). Long-term field evidence shows that yield benefits become clearer when repeated residue inputs improve soil quality and multifunctionality, although their magnitude continues to vary with soil conditions and return practices [93,94]. Residue nutrients can contribute to crop production after decomposition and plant uptake, making the synchronization between nutrient release and crop demand important for the formation of yield benefits [95,96]. In rainfed systems, soil water storage further regulates crop access to these nutrients and can strengthen or constrain yield responses to surface straw management [97]. The significant maize yield response indicates that the agronomic effects of RR emerged within the three-year experiment, although the absence of a soybean response suggests that these effects differed between crops [98,99].
This three-year field study provides field-based evidence of the short-term responses of soil properties and crop yield to residue return across contrasting maize-based cropping systems under rainfed conditions. However, the single-site design limits the broader extrapolation of the present findings, while the absence of biological measurements constrains mechanistic interpretation. Future studies across multiple sites, with continued long-term observations, quantified residue inputs, and integrated biological measurements, are needed to determine whether these response patterns persist across rainfed cropping systems.

5. Conclusions

The short-term effects of residue return were concentrated in surface-soil chemical conditions and available nutrient status. Across maize monoculture and maize–soybean intercropping systems, the most consistent soil responses to RR were observed for pH and AK, particularly in the 0–20 cm soil layer. Multivariate analyses further showed that these responses were associated with coordinated variation in pH, available nutrients, soil water status, and soil physical properties. The contrasting yield responses of maize and soybean suggest that the agronomic benefits of residue return may depend on crop type. Overall, the stronger responses of surface-soil chemical properties and available nutrients indicate that these relatively dynamic soil processes may respond earlier than bulk soil properties during the initial stage of residue return.

Supplementary Materials

The following supporting information can be downloaded at https://www.mdpi.com/article/10.3390/land15101873/s1. Figure S1: Schematic representation of the randomized complete block design and treatment allocation; Table S1: Soil physicochemical properties under residue removal across cropping systems, years, and soil depths; Table S2: Soil physicochemical properties under residue return across cropping systems, years, and soil depths.

Author Contributions

Conceptualization, Y.-X.C.; methodology, Y.-X.C. and X.-W.J.; formal analysis, Y.-X.C.; investigation, Y.-X.C. and J.M.; writing—original draft preparation, Y.-X.C.; writing—review and editing, J.M. and X.Z.; visualization, Y.-X.C.; supervision, X.Z. All authors have read and agreed to the published version of the manuscript.

Funding

This work was supported by the National Key R & D Program of China (2023YFD1501500).

Data Availability Statement

The raw data supporting the conclusions of this article will be made available by the authors on request.

Conflicts of Interest

The authors declare no conflicts of interest.

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