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Genes, Volume 13, Issue 8

2022 August - 208 articles

Cover Story: Environmental factors such as diet, gut microbiota, and infections have proven to have a significant role in epigenetic modifications. In this study, prenatal exposure to Lactobacillus reuteri, a well-studied species of probiotic bacteria, prevented FXS-like symptoms in mice fed with a westernized diet. Epigenetic profiles in the offspring mice descended from mothers treated with Lactobacillus reuteri identified genes involved in different neurological pathways including synaptogenesis, neurogenesis, reelin signaling pathway, and long-term potentiation. The epigenetic signature resulting from this study could lead to a better understanding of the pathways involved in neurodevelopmental disorders and to the identification of potential diagnostic biomarkers, and it could pave the way for novel therapeutic approaches. View this paper
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Articles (208)

  • Article
  • Open Access
14 Citations
3,885 Views
14 Pages

22 August 2022

Increased trabecular meshwork (TM) cell and tissue contractility is a driver of the reduced outflow facility and elevation of intraocular pressure (IOP) associated with primary open-angle glaucoma (POAG). Connective tissue growth factor (CTGF) is an...

(This article belongs to the Section Human Genomics and Genetic Diseases)
  • Article
  • Open Access
11 Citations
4,534 Views
12 Pages

Predominance of the Rare EGFR Mutation p.L861Q in Tunisian Patients with Non-Small Cell Lung Carcinoma

  • Rania Abdelmaksoud-Dammak,
  • Nihel Ammous-Boukhris,
  • Amèna Saadallah-Kallel,
  • Slim Charfi and ,
  • Souhir Khemiri,
  • Rim Khemakhem,
  • Nesrin Kallel,
  • Wala Ben Kridis-Rejeb,
  • Tahya Sallemi-Boudawara and
  • Raja Mokdad-Gargouri
  • + 8 authors+ 3 authors

22 August 2022

Objectives: Several new cancer therapies targeting signaling pathways involved in the growth and progression of cancer cells were developed as personalized medicine. Our study aimed to identify epidermal growth factor receptor (EGFR) mutations for TK...

(This article belongs to the Section Genetic Diagnosis)
  • Review
  • Open Access
14 Citations
7,850 Views
14 Pages

Relationship between Nutrition, Lifestyle, and Neurodegenerative Disease: Lessons from ADH1B, CYP1A2 and MTHFR

  • Shila Barati,
  • Carlo Fabrizio,
  • Claudia Strafella,
  • Raffaella Cascella and ,
  • Valerio Caputo,
  • Domenica Megalizzi,
  • Cristina Peconi,
  • Julia Mela,
  • Luca Colantoni and
  • Emiliano Giardina
  • + 7 authors+ 2 authors

22 August 2022

In the present review, the main features involved in the susceptibility and progression of neurodegenerative disorders (NDDs) have been discussed, with the purpose of highlighting their potential application for promoting the management and treatment...

(This article belongs to the Special Issue Feature Papers in Human Genomics and Genetic Diseases)
  • Communication
  • Open Access
9 Citations
3,738 Views
11 Pages

Genetic Variants Associated with Elevated Plasma Ceramides in Individuals with Metabolic Syndrome

  • Sanghoo Lee,
  • Seol-A Kim,
  • Yejin Kim,
  • Juhoon Kim and ,
  • Gayeon Hong,
  • Jeonghoon Hong,
  • Kyeonghwan Choi,
  • Chun-Sick Eom,
  • Saeyun Baik and
  • Kyoung-Ryul Lee
  • + 6 authors+ 1 author

22 August 2022

Metabolic syndrome (MetS) is a complex condition of metabolic disorders and shows a steady onset globally. Ceramides are known as intracellular signaling molecules that influence key metabolism through various pathways such as MetS and insulin resist...

(This article belongs to the Section Genetic Diagnosis)
  • Article
  • Open Access
5 Citations
4,890 Views
20 Pages

Genomic Assessment of Cancer Susceptibility in the Threatened Catalina Island Fox (Urocyon littoralis catalinae)

  • Sarah A. Hendricks,
  • Julie L. King,
  • Calvin L. Duncan,
  • Winston Vickers and ,
  • Paul A. Hohenlohe and
  • Brian W. Davis
  • + 1 author+ 0 author

22 August 2022

Small effective population sizes raise the probability of extinction by increasing the frequency of potentially deleterious alleles and reducing fitness. However, the extent to which cancers play a role in the fitness reduction of genetically depaupe...

(This article belongs to the Special Issue Advances in Canine Genetics)
  • Article
  • Open Access
12 Citations
3,327 Views
13 Pages

Cathepsin D Plays a Vital Role in Macrobrachium nipponense of Ovary Maturation: Identification, Characterization, and Function Analysis

  • Dan Cheng,
  • Wenyi Zhang,
  • Sufei Jiang,
  • Yiwei Xiong and ,
  • Shubo Jin,
  • Fangyan Pan,
  • Junpeng Zhu,
  • Yongsheng Gong,
  • Yan Wu and
  • Hongtuo Fu
  • + 6 authors+ 1 author

21 August 2022

The oriental river prawn Macrobrachium nipponense is an economically important aquacultural species. However, its aquaculture is negatively impacted by the rapid sexual maturation of female M. nipponense. The fast sexual maturation produces a large n...

(This article belongs to the Section Animal Genetics and Genomics)
  • Article
  • Open Access
10 Citations
5,004 Views
21 Pages

A Comparison of Three Machine Learning Methods for Multivariate Genomic Prediction Using the Sparse Kernels Method (SKM) Library

  • Osval A. Montesinos-López,
  • Abelardo Montesinos-López,
  • Bernabe Cano-Paez,
  • Carlos Moisés Hernández-Suárez and ,
  • Pedro C. Santana-Mancilla and
  • José Crossa
  • + 1 author+ 0 author

21 August 2022

Genomic selection (GS) changed the way plant breeders select genotypes. GS takes advantage of phenotypic and genotypic information to training a statistical machine learning model, which is used to predict phenotypic (or breeding) values of new lines...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
8 Citations
4,330 Views
18 Pages

Identification of Alkaline Salt Tolerance Genes in Brassica napus L. by Transcriptome Analysis

  • Yu Xu,
  • Shunxian Tao,
  • Yunlin Zhu,
  • Qi Zhang and ,
  • Ping Li,
  • Han Wang,
  • Yan Zhang,
  • Aldiyar Bakirov,
  • Hanming Cao and
  • Zhen Huang
  • + 11 authors+ 6 authors

21 August 2022

Soil salt alkalization is one major abiotic factor reducing the productivity of crops, including rapeseed, an indispensable oil crop and vegetable. The mechanism studies of alkali salt tolerance can help breed highly resistant varieties. In the curre...

(This article belongs to the Topic Genetic Engineering in Agriculture)
  • Article
  • Open Access
15 Citations
3,354 Views
14 Pages

Association Analysis for Some Biochemical Traits in Wild Relatives of Wheat under Drought Stress Conditions

  • Alireza Pour-Aboughadareh,
  • Omid Jadidi,
  • Lia Shooshtari,
  • Peter Poczai and
  • Ali Ashraf Mehrabi

21 August 2022

In the present study, we estimated genetic diversity and population structure in 186 accessions of Triticum and Aegilops species using 24 simple sequence repeat markers (SSR). Furthermore, an association analysis was performed for antioxidant activit...

(This article belongs to the Special Issue Genetic Diversity, Conservation and Utilization of Plant Genetic Resources)
  • Article
  • Open Access
11 Citations
4,226 Views
10 Pages

Inherited Retinal Dystrophy in Southeastern United States: Characterization of South Carolina Patients and Comparative Literature Review

  • Joseph Griffith,
  • Kareem Sioufi,
  • Laurie Wilbanks,
  • George N. Magrath and ,
  • Emil A. T. Say,
  • Michael J. Lyons,
  • Meg Wilkes,
  • Gurpur Shashidhar Pai and
  • Mae Millicent Winfrey Peterseim
  • + 4 authors+ 0 author

20 August 2022

Inherited retinal dystrophies (IRDs) are a group of rare diseases involving more than 340 genes and a variety of clinical phenotypes that lead to significant visual impairment. The aim of this study is to evaluate the rates and genetic characteristic...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
6 Citations
3,299 Views
15 Pages

Genome-Wide Identification and Expression Analyses of the Cotton AGO Genes and Their Potential Roles in Fiber Development and Stress Response

  • Mingchuan Fu,
  • Yizhen Chen,
  • Hao Li,
  • Liguo Wang and ,
  • Renzhong Liu and
  • Zhanji Liu
  • + 1 author+ 0 author

20 August 2022

Argonaute proteins (AGOs) are indispensable components of RNA silencing. However, systematic characterization of the AGO genes have not been completed in cotton until now. In this study, cotton AGO genes were identified and analyzed with respect to t...

(This article belongs to the Section Genes & Environments)
  • Article
  • Open Access
7 Citations
3,790 Views
13 Pages

20 August 2022

The green peach aphid (GPA), Myzus persicae, is an important pest of the peach crop. Three major dominant resistance genes have already been detected, Rm1 in the Weeping Flower Peach (WFP) clone, Rm2 in the Rubira clone, and Rm3 in the Fen Shouxing c...

(This article belongs to the Special Issue Genetics and Genomics of Edible Rosaceae)
  • Article
  • Open Access
1 Citations
3,125 Views
15 Pages

20 August 2022

In the nervous system, synapses are special and pervasive structures between axonal and dendritic terminals, which facilitate electrical and chemical communications among neurons. Extensive studies have been conducted in mice and rats to explore the...

(This article belongs to the Section RNA)
  • Article
  • Open Access
3 Citations
3,539 Views
10 Pages

20 August 2022

The main objective of this study was to determine the impact of increased demand for peregrine falcons via breeding (mainly Polish, Czech, German and Slovak) on the genetic structure of the birds. In the analysis, 374 specimens from six countries wer...

(This article belongs to the Special Issue Genetic Structure of World Animal Populations)
  • Article
  • Open Access
32 Citations
6,869 Views
8 Pages

19 August 2022

Term synonymous variation is widely used, but frequently in a wrong or misleading meaning and context. Twenty three point eight % of possible nucleotide substitution types in the universal genetic code are for synonymous amino acid changes, but when...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
25 Citations
3,342 Views
16 Pages

Selection of Suitable Reference Genes for Gene Expression Normalization Studies in Dendrobium huoshanense

  • Shanyong Yi,
  • Haibo Lu,
  • Chuanjun Tian,
  • Tao Xu and ,
  • Cheng Song,
  • Wei Wang,
  • Peipei Wei,
  • Fangli Gu,
  • Dong Liu and
  • Bangxing Han
  • + 6 authors+ 1 author

19 August 2022

Dendrobium huoshanense is a kind of precious herb with important medicinal and edible value in China, which is widely used in traditional Chinese medicine for various diseases. Recent studies have paid close attention to the genetic expression of the...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
12 Citations
3,124 Views
9 Pages

Circular Noncoding RNA hsa_circ_0003570 as a Prognostic Biomarker for Hepatocellular Carcinoma

  • Se Young Jang,
  • Gyeonghwa Kim,
  • Won Young Tak,
  • Young Oh Kweon and ,
  • Yu Rim Lee,
  • Young Seok Han,
  • Ja Ryung Han,
  • Jung Gil Park,
  • Min Kyu Kang and
  • Keun Hur
  • + 8 authors+ 3 authors

19 August 2022

Circular RNAs (circRNAs) are potential biomarkers owing to their stability, tissue specificity, and abundance. This study aimed to evaluate the clinical significance of hsa_circ_0003570 expression and to investigate its potential as a biomarker in he...

(This article belongs to the Special Issue Non-coding RNAs in Human Health and Diseases)
  • Case Report
  • Open Access
5 Citations
4,042 Views
9 Pages

An Atypical Presentation of Upper Motor Neuron Predominant Juvenile Amyotrophic Lateral Sclerosis Associated with TARDBP Gene: A Case Report and Review of the Literature

  • Daniel Sánchez-Tejerina,
  • Juan Luis Restrepo-Vera,
  • Eulalia Rovira-Moreno,
  • Marta Codina-Sola and ,
  • Arnau Llauradó,
  • Javier Sotoca,
  • Maria Salvado,
  • Núria Raguer,
  • Elena García-Arumí and
  • Raúl Juntas-Morales
  • + 5 authors+ 0 author

19 August 2022

Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease that can rarely affect young individuals. Juvenile ALS (JALS) is defined for individuals with an onset of the disease before the age of 25. The contribution of genetics to ALS patholo...

(This article belongs to the Special Issue Advances in Genetics of Motor Neuron Diseases)
  • Article
  • Open Access
9 Citations
3,593 Views
11 Pages

Metabolomic Profiling Reveals Common Metabolic Alterations in Plasma of Patients with Toxoplasma Infection and Schizophrenia

  • Emelia Osman,
  • Anis Safirah Mohammad Zahariluddin,
  • Shalisah Sharip,
  • Zulkarnain Md Idris and
  • Jen Kit Tan

19 August 2022

Toxoplasma gondii is an opportunistic protozoan parasite known to affect the human brain. The infection has been associated with an increased incidence of schizophrenia; however, the link between the two conditions remains unclear. This study aimed t...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
12 Citations
3,338 Views
13 Pages

Genome-Wide Analysis of the WOX Transcription Factor Genes in Dendrobium catenatum Lindl.

  • Hefan Li,
  • Cheng Li,
  • Yuhua Wang,
  • Xiangshi Qin and ,
  • Lihua Meng and
  • Xudong Sun
  • + 1 author+ 0 author

19 August 2022

The WUSCHEL-related homeobox (WOX) proteins are a class of transcription factors exclusive to plants. They can promote cell division or inhibit stem cell differentiation to regulate plant growth and development. However, the WOX transcription factor...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
7 Citations
4,071 Views
13 Pages

Gene–microRNA Network Analysis Identified Seven Hub Genes in Association with Progression and Prognosis in Non-Small Cell Lung Cancer

  • Zhiyuan Yang,
  • Hongqi Wang,
  • Zixin Zhao,
  • Yunlong Jin and ,
  • Zhengnan Zhang,
  • Jiayi Tan and
  • Fuyan Hu
  • + 2 authors+ 0 author

19 August 2022

Introduction: Lung cancer is the leading cause of cancer deaths in the world and is usually divided into non-small cell lung cancer (NSCLC) and small cell lung cancer. NSCLC is dominant and accounts for 85% of the total cases. Currently, the therapeu...

(This article belongs to the Special Issue Bioinformatics of Disease Genes)
  • Review
  • Open Access
10 Citations
3,049 Views
8 Pages

19 August 2022

Extrahepatic cholangiocarcinomas, also called bile duct carcinomas, represent a special entity in gastrointestinal tumors, and histological specimens of the tumors are often difficult to obtain. A special feature of these tumors is the strong neovasc...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
3 Citations
2,530 Views
6 Pages

Predisposition to Myocardial Infarction Influenced by Interleukin 13 Gene Polymorphisms: A Case-Control Study

  • Seyyed Fatemeh Hosseini,
  • Khalil Khashei Varnamkhasti,
  • Raziyeh Naeimi,
  • Leila Naeimi and
  • Sirous Naeimi

19 August 2022

Background: Additional inflammatory responses and subsequent damage—arising from enhance transcriptional activity or forming the more active protein due to existence of polymorphic sites in the pro-inflammatory cytokines gene loci—give ri...

(This article belongs to the Special Issue Genetics and Mechanistic Basis of Cardiomyopathies)
  • Article
  • Open Access
25 Citations
3,847 Views
14 Pages

Development of SLAF-Sequence and Multiplex SNaPshot Panels for Population Genetic Diversity Analysis and Construction of DNA Fingerprints for Sugarcane

  • Hui Zhang,
  • Pingping Lin,
  • Yanming Liu,
  • Chaohua Huang and ,
  • Guoqiang Huang,
  • Hongtao Jiang,
  • Liangnian Xu,
  • Muqing Zhang,
  • Zuhu Deng and
  • Xinwang Zhao
  • + 5 authors+ 0 author

19 August 2022

A genetic diversity analysis and identification of plant germplasms and varieties are important and necessary for plant breeding. Deoxyribonucleotide (DNA) fingerprints based on genomic molecular markers play an important role in accurate germplasm i...

(This article belongs to the Special Issue Genetic Diversity, Conservation and Utilization of Plant Genetic Resources)
  • Article
  • Open Access
35 Citations
4,755 Views
20 Pages

IbMYB308, a Sweet Potato R2R3-MYB Gene, Improves Salt Stress Tolerance in Transgenic Tobacco

  • Chong Wang,
  • Lianjun Wang,
  • Jian Lei,
  • Shasha Chai and ,
  • Xiaojie Jin,
  • Yuyan Zou,
  • Xiaoqiong Sun,
  • Yuqin Mei,
  • Xianliang Cheng and
  • Xiaohai Tian
  • + 7 authors+ 2 authors

18 August 2022

The MYB (v-myb avian myeloblastosis viral oncogene homolog) transcription factor family plays an important role in plant growth, development, and response to biotic and abiotic stresses. However, the gene functions of MYB transcription factors in swe...

(This article belongs to the Special Issue Sweet Potato Genetics and Genomics)
  • Review
  • Open Access
12 Citations
6,263 Views
20 Pages

18 August 2022

Atherosclerosis is one of the most important medical and social problems of modern society. Atherosclerosis causes a large number of hospitalizations, disability, and mortality. A considerable amount of evidence suggests that inflammation is one of t...

(This article belongs to the Special Issue Molecular Mechanisms of Vascular Disease)
  • Article
  • Open Access
9 Citations
3,656 Views
15 Pages

18 August 2022

Taxonomy in Bufonidae witnessed notable transformations. Bufotes viridis and Epidalea calamita, previously included in genus Bufo, were relocated in other genera, while the genus Bufo was restricted to members of the earlier Bufo bufo group. On the o...

(This article belongs to the Special Issue Chromosome Evolution and Karyotype Analysis)
  • Article
  • Open Access
5 Citations
3,810 Views
17 Pages

Life-Course Associations between Blood Pressure-Related Polygenic Risk Scores and Hypertension in the Bogalusa Heart Study

  • Xiao Sun,
  • Yang Pan,
  • Ruiyuan Zhang,
  • Ileana De Anda-Duran and ,
  • Zhijie Huang,
  • Changwei Li,
  • Mengyao Shi,
  • Alexander C. Razavi,
  • Lydia A. Bazzano and
  • Tanika N. Kelly
  • + 7 authors+ 2 authors

18 August 2022

Genetic information may help to identify individuals at increased risk for hypertension in early life, prior to the manifestation of elevated blood pressure (BP) values. We examined 369 Black and 832 White Bogalusa Heart Study (BHS) participants recr...

(This article belongs to the Section Human Genomics and Genetic Diseases)
  • Article
  • Open Access
20 Citations
9,399 Views
17 Pages

Analysis of Common SNPs across Continents Reveals Major Genomic Differences between Human Populations

  • Larisa Fedorova,
  • Andrey Khrunin,
  • Gennady Khvorykh,
  • Jan Lim and ,
  • Nicholas Thornton,
  • Oleh A. Mulyar,
  • Svetlana Limborska and
  • Alexei Fedorov
  • + 3 authors+ 0 author

18 August 2022

Common alleles tend to be more ancient than rare alleles. These common SNPs appeared thousands of years ago and reflect intricate human evolution including various adaptations, admixtures, and migration events. Eighty-four thousand abundant region-sp...

(This article belongs to the Special Issue Feature Papers in Population and Evolutionary Genetics and Genomics)
  • Review
  • Open Access
20 Citations
7,354 Views
39 Pages

Epigenetic Alterations in Sports-Related Injuries

  • Maciej Tarnowski,
  • Patrycja Tomasiak,
  • Marta Tkacz,
  • Katarzyna Zgutka and
  • Katarzyna Piotrowska

17 August 2022

It is a well-known fact that physical activity benefits people of all age groups. However, highly intensive training, maladaptation, improper equipment, and lack of sufficient rest lead to contusions and sports-related injuries. From the perspectives...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
8 Citations
3,473 Views
14 Pages

Evolution of the Noncoding Features of Sea Snake Mitochondrial Genomes within Elapidae

  • Xiakena Xiaokaiti,
  • Yasuyuki Hashiguchi,
  • Hidetoshi Ota and
  • Yoshinori Kumazawa

17 August 2022

Mitochondrial genomes of four elapid snakes (three marine species [Emydocephalus ijimae, Hydrophis ornatus, and Hydrophis melanocephalus], and one terrestrial species [Sinomicrurus japonicus]) were completely sequenced by a combination of Sanger sequ...

(This article belongs to the Special Issue Phylogeny and Genomics of Reptiles)
  • Review
  • Open Access
17 Citations
3,371 Views
9 Pages

Research Progress in J-Proteins in the Chloroplast

  • Lu Zhao,
  • Ting Jia,
  • Qingsong Jiao and
  • Xueyun Hu

17 August 2022

The J-proteins, also called DNAJ-proteins or heat shock protein 40 (HSP40), are one of the famous molecular chaperones. J-proteins, HSP70s and other chaperones work together as constitute ubiquitous types of molecular chaperone complex, which functio...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
20 Citations
5,095 Views
23 Pages

Interspecific and Intraspecific Hybrid Rootstocks to Improve Horticultural Traits and Soil-Borne Disease Resistance in Tomato

  • Mean Vanlay,
  • Song Samnang,
  • Hee-Jong Jung,
  • Phillip Choe and ,
  • Kwon Kyoo Kang and
  • Ill-Sup Nou
  • + 1 author+ 0 author

17 August 2022

Tomato rootstocks are important to increase yield and control soil-borne pathogens, increasing vigor for a longer crop cycle and tolerance to biotic and abiotic stress. This study, conducted in the greenhouse of Sunchon National University during the...

(This article belongs to the Special Issue Genetic Research and Plant Breeding)
  • Article
  • Open Access
9 Citations
3,013 Views
13 Pages

MiR-107 Regulates Adipocyte Differentiation and Adipogenesis by Targeting Apolipoprotein C-2 (APOC2) in Bovine

  • Xuefeng Wei,
  • Xue Zhao,
  • Xinyue Shan,
  • Yunchang Zhu and ,
  • Shuzhe Wang,
  • Hong Chen,
  • Hui Li and
  • Yun Ma
  • + 3 authors+ 0 author

17 August 2022

Adipogenesis is a complex and precisely orchestrated process mediated by a series of adipogenic regulatory factors. Recent studies have highlighted the importance of microRNAs (miRNAs) in diverse biological processes, most specifically in regulating...

(This article belongs to the Section Animal Genetics and Genomics)
  • Article
  • Open Access
5 Citations
3,731 Views
10 Pages

17 August 2022

Myotonic dystrophy type 1 (DM1) is the most common autosomal-dominant disorder caused by the CTG repeat expansion of the DMPK, and it has been categorized into three phenotypes: mild, classic, and congenital DM1. Here, we reviewed the intergeneration...

(This article belongs to the Special Issue Genetics of Muscular Dystrophies from Pathogenesis to Gene Therapy)
  • Article
  • Open Access
21 Citations
4,882 Views
10 Pages

Genetics of Pediatric Epilepsy: Next-Generation Sequencing in Clinical Practice

  • Antonela Blazekovic,
  • Kristina Gotovac Jercic,
  • Sarah Meglaj,
  • Vlasta Duranovic and ,
  • Igor Prpic,
  • Bernarda Lozic,
  • Masa Malenica,
  • Silvana Markovic,
  • Lucija Lujic and
  • Fran Borovecki
  • + 9 authors+ 4 authors

17 August 2022

Epilepsy is one of the most common neurological disorders with diverse phenotypic characteristics and high genetic heterogeneity. Epilepsy often occurs in childhood, so timely diagnosis and adequate therapy are crucial for preserving quality of life...

(This article belongs to the Special Issue Genetics of Complex Human Disease)
  • Article
  • Open Access
5 Citations
3,238 Views
14 Pages

Analysis of Protein Sequence Identity, Binding Sites, and 3D Structures Identifies Eight Pollen Species and Ten Fruit Species with High Risk of Cross-Reactive Allergies

  • Wei Zhou,
  • Kaylah Bias,
  • Dylan Lenczewski-Jowers,
  • Jiliah Henderson and ,
  • Victor Cupp,
  • Anthony Ananga,
  • Joel Winyo Ochieng and
  • Violeta Tsolova
  • + 3 authors+ 0 author

17 August 2022

Fruit allergens are proteins from fruits or pollen that cause allergy in humans, an increasing food safety concern worldwide. With the globalization of food trade and changing lifestyles and dietary habits, characterization and identification of thes...

(This article belongs to the Section Bioinformatics)
  • Article
  • Open Access
14 Citations
4,551 Views
14 Pages

17 August 2022

Background: Polycystic ovary syndrome (PCOS) is commonly associated with metabolic abnormalities such as hyperinsulinemia, insulin resistance and obesity. The genetic variants of genes regulating insulin action, expression and regulation are suggeste...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Article
  • Open Access
6 Citations
3,265 Views
10 Pages

17 August 2022

The abnormal expression of long non-coding RNAs(lncRNAs) is closely related to the prognosis of patients. This finding may indicate a new target for the treatment of malignant tumors. Non-muscle invasive bladder cancer (NMIBC) is the most common subt...

(This article belongs to the Special Issue The Role of RNA Processing and Metabolism in Tumors)
  • Article
  • Open Access
3 Citations
2,972 Views
11 Pages

A Mouse Model with Ablated Asparaginase and Isoaspartyl Peptidase 1 (Asrgl1) Develops Early Onset Retinal Degeneration (RD) Recapitulating the Human Phenotype

  • Pooja Biswas,
  • Anne Marie Berry,
  • Qais Zawaydeh,
  • Dirk-Uwe G. Bartsch and ,
  • Pongali B. Raghavendra,
  • J. Fielding Hejtmancik,
  • Naheed W. Khan,
  • S. Amer Riazuddin and
  • Radha Ayyagari
  • + 4 authors+ 0 author

17 August 2022

We previously identified a homozygous G178R mutation in human ASRGL1 (hASRGL1) through whole-exome analysis responsible for early onset retinal degeneration (RD) in patients with cone–rod dystrophy. The mutant G178R ASRGL1 expressed in Cos-7 ce...

(This article belongs to the Section Human Genomics and Genetic Diseases)
  • Article
  • Open Access
4 Citations
4,094 Views
9 Pages

Molecular Dynamic Simulation Reveals Structure Differences in APOL1 Variants and Implication in Pathogenesis of Chronic Kidney Disease

  • Richard Mayanja,
  • Christopher Kintu,
  • Oudou Diabate,
  • Opeyemi Soremekun and ,
  • Olugbenga Oluseun Oluwagbemi,
  • Mamadou Wele,
  • Robert Kalyesubula,
  • Daudi Jjingo,
  • Tinashe Chikowore and
  • Segun Fatumo
  • + 5 authors+ 0 author

16 August 2022

Background: According to observational studies, two polymorphisms in the apolipoprotein L1 (APOL1) gene have been linked to an increased risk of chronic kidney disease (CKD) in Africans. One polymorphism involves the substitution of two amino-acid re...

(This article belongs to the Topic Bioinformatics in Drug Design and Discovery)
  • Review
  • Open Access
6 Citations
7,641 Views
12 Pages

16 August 2022

Pluripotent stem cells (PSCs), which can self-renew and give rise to all cell types in all three germ layers, have great potential in regenerative medicine. Recent studies have shown that PSCs can have three distinct but interrelated pluripotent stat...

(This article belongs to the Special Issue Gene Regulation of Development and Reproduction in Mammals)
  • Article
  • Open Access
10 Citations
4,034 Views
14 Pages

16 August 2022

(1) Background: Wharton’s Jelly stem cells (WJ-MSCs) are multipotent mesenchymal stem cells that can proliferate rapidly and have low immunogenicity. Therefore, WJ-MSCs have gained considerable attention in the fields of immunomodulation and di...

(This article belongs to the Section Technologies and Resources for Genetics)
  • Article
  • Open Access
13 Citations
3,572 Views
13 Pages

LHX2 Enhances the Malignant Phenotype of Esophageal Squamous Cell Carcinoma by Upregulating the Expression of SERPINE2

  • Xukun Li,
  • Xueling Wu,
  • Hongyan Chen,
  • Zhihua Liu and ,
  • Huan He and
  • Luhua Wang
  • + 1 author+ 0 author

16 August 2022

LHX2 dysregulations have been found to present in cancers, but the function of LHX2 in esophageal squamous cell carcinoma (ESCC) remains unknown. Here, we report that LHX2 was upregulated in ESCC tissues in comparison to the LHX2 levels in adjacent n...

(This article belongs to the Special Issue Gene Regulation in Cancers)
  • Article
  • Open Access
8 Citations
3,543 Views
14 Pages

16 August 2022

This study aimed to investigate the impact of heat stress (HS) and the effects of dietary soluble fiber from beet pulp (BP) on gene expression (differentially expressed genes, DEGs) of the porcine jejunum. Out of the 82 DEGs, 47 genes were up-regulat...

(This article belongs to the Section Animal Genetics and Genomics)
  • Article
  • Open Access
13 Citations
3,789 Views
22 Pages

Genome-Wide Identification and Characterization of SPL Family Genes in Chenopodium quinoa

  • Hongmei Zhao,
  • Huaqi Cao,
  • Mian Zhang,
  • Sufang Deng and ,
  • Tingting Li and
  • Shuping Xing
  • + 1 author+ 0 author

16 August 2022

SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes encode a large family of plant-specific transcription factors that play important roles in plant growth, development, and stress responses. However, there is little information available on SPL genes...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
16 Citations
4,285 Views
13 Pages

Genome-Wide Association Study Reveals Additive and Non-Additive Effects on Growth Traits in Duroc Pigs

  • Yahui Xue,
  • Shen Liu,
  • Weining Li,
  • Ruihan Mao and ,
  • Yue Zhuo,
  • Wenkai Xing,
  • Jian Liu,
  • Chuang Wang,
  • Lei Zhou and
  • Jianfeng Liu
  • + 6 authors+ 1 author

16 August 2022

Growth rate plays a critical role in the pig industry and is related to quantitative traits controlled by many genes. Here, we aimed to identify causative mutations and candidate genes responsible for pig growth traits. In this study, 2360 Duroc pigs...

(This article belongs to the Special Issue Quantitative Genetics and Bioinformatics Method in Animals)
  • Article
  • Open Access
9 Citations
5,168 Views
15 Pages

Integrity, Trustworthiness, and Effectiveness: Towards an Ethos for Forensic Genetics

  • Matthias Wienroth,
  • Aaron Opoku Amankwaa and
  • Carole McCartney

16 August 2022

Forensic genetics comes under critical scrutiny when developments challenge previously accepted legal, ethical, social, and other boundaries. Forensic geneticists continue to build a knowledge culture within a community of practice that acknowledges...

(This article belongs to the Special Issue State-of-the-Art in Forensic Genetics)
  • Article
  • Open Access
5 Citations
3,071 Views
23 Pages

Comparative Transcriptome Analysis Reveals Genes Associated with the Gossypol Synthesis and Gland Morphogenesis in Gossypium hirsutum

  • Cuiping Zhang,
  • Xiuyan Liu,
  • Yin Song,
  • Zhengran Sun and ,
  • Jinli Zhang,
  • Hao Wu,
  • Yuzhen Yang,
  • Zhenkai Wang and
  • Daohua He
  • + 4 authors+ 0 author

15 August 2022

Gossypium hirsutum is an important source of natural textile fibers. Gossypol, which is a sesquiterpenoid compound mainly existing in the cotton pigment glands, can facilitate resistance to the stress from diseases and pests. The level of gossypol in...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
10 Citations
2,476 Views
13 Pages

Expression Profiles of Microsatellites in Fruit Tissues of Akebia trifoliata and Development of Efficient EST-SSR Markers

  • Wei Chen,
  • Huai Yang,
  • Shengfu Zhong,
  • Jun Zhu and ,
  • Qiuyi Zhang,
  • Zhi Li,
  • Tianheng Ren,
  • Feiquan Tan,
  • Jinliang Shen and
  • Peigao Luo
  • + 6 authors+ 1 author

15 August 2022

Akebia trifoliata, a member of the family Lardizabalaceae, has high exploitation potential for multiple economic purposes, so genetic improvements to meet requirements for commercial demand are needed. However, this progress is largely impeded by a l...

(This article belongs to the Section Plant Genetics and Genomics)

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Genes - ISSN 2073-4425