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International Journal of Molecular Sciences, Volume 12, Issue 5

2011 May - 43 articles

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Articles (43)

  • Article
  • Open Access
20 Citations
9,818 Views
15 Pages

24 May 2011

The endo-β-1,4-glucanase gene celE from the anaerobic fungus Orpinomyces PC-2 was placed under the control of an alcohol oxidase promoter (AOX1) in the plasmid pPIC9K, and integrated into the genome of a methylotrophic yeast P. pastoris GS115 by elec...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
17 Citations
9,766 Views
13 Pages

24 May 2011

Extractable dietary fiber (DF) plays an important role in nutrition. This study on porridge making with whole grain rye investigated the effect of rest time of flour slurries at room temperature before cooking and amount of flour and salt in the reci...

(This article belongs to the Special Issue Dietary Fibre: Biochemistry and Nutritional Science)
  • Article
  • Open Access
61 Citations
10,091 Views
12 Pages

23 May 2011

To investigate anticancer effect of lycopene, we examined the effects of lycopene on the oxidative injury and immunity activities of N-methyl-N′-nitro-N-nitrosoguanidine (MNNG)-induced gastric cancer rats. The animals were divided into five groups. G...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
99 Citations
13,526 Views
14 Pages

Anticoagulant, Antioxidant and Antitumor Activities of Heterofucans from the Seaweed Dictyopteris delicatula

  • Kaline Dantas Magalhaes,
  • Leandro Silva Costa,
  • Gabriel Pereira Fidelis,
  • Ruth Medeiros Oliveira,
  • Leonardo Thiago Duarte Barreto Nobre,
  • Nednaldo Dantas-Santos,
  • Rafael Barros Gomes Camara,
  • Ivan Rui Lopes Albuquerque,
  • Sara Lima Cordeiro and
  • Hugo Alexandre Oliveira Rocha
  • + 3 authors

23 May 2011

In the present study, six families of sulfated polysaccharides were obtained from seaweed Dictyopteris delicatula by proteolytic digestion, followed by acetone fractionation and molecular sieving on Sephadex G-100. Chemical analyses demonstrated that...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
29 Citations
10,829 Views
18 Pages

20 May 2011

A molecularly imprinted polymer (MIP), obtained by precipitation polymerisation with 4-vinylpyridine as the functional monomer, ethylene glycol dimethacrylate as cross-linker, and bisphenol-A (BPA) as template, was prepared. The binding site configur...

(This article belongs to the Special Issue Molecular Imprinting Science and Technology)
  • Review
  • Open Access
170 Citations
22,192 Views
19 Pages

Nanomedicine: Application Areas and Development Prospects

  • Houria Boulaiz,
  • Pablo J. Alvarez,
  • Alberto Ramirez,
  • Juan A. Marchal,
  • Jose Prados,
  • Fernando Rodríguez-Serrano,
  • Macarena Perán,
  • Consolación Melguizo and
  • Antonia Aranega

19 May 2011

Nanotechnology, along with related concepts such as nanomaterials, nanostructures and nanoparticles, has become a priority area for scientific research and technological development. Nanotechnology, i.e., the creation and utilization of materials and...

(This article belongs to the Special Issue Bioactive Nanoparticles (special issue))
  • Article
  • Open Access
31 Citations
12,970 Views
13 Pages

Novel Natural Inhibitors of CYP1A2 Identified by in Silico and in Vitro Screening

  • Ruixin Zhu,
  • Liwei Hu,
  • Haiyun Li,
  • Juan Su,
  • Zhiwei Cao and
  • Weidong Zhang

18 May 2011

Inhibition of cytochrome P450 (CYP) is a major cause of herb–drug interactions. The CYP1A2 enzyme plays a major role in the metabolism of drugs in humans. Its broad substrate specificity, as well as its inhibition by a vast array of structurally dive...

(This article belongs to the Section Biochemistry)
  • Review
  • Open Access
1,025 Citations
50,323 Views
25 Pages

Microfluidic Mixing: A Review

  • Chia-Yen Lee,
  • Chin-Lung Chang,
  • Yao-Nan Wang and
  • Lung-Ming Fu

18 May 2011

The aim of microfluidic mixing is to achieve a thorough and rapid mixing of multiple samples in microscale devices. In such devices, sample mixing is essentially achieved by enhancing the diffusion effect between the different species flows. Broadly...

(This article belongs to the Special Issue Microfluidics)
  • Article
  • Open Access
77 Citations
11,219 Views
15 Pages

18 May 2011

In this research, two types of sulfated polysaccharide derivatives were successfully synthesized. Their antioxidant activities were investigated by employing various established in vitro systems. In addition, the degree of sulfation was evaluated usi...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
53 Citations
10,357 Views
14 Pages

KRAS Mutation Detection in Paired Frozen and Formalin-Fixed Paraffin-Embedded (FFPE) Colorectal Cancer Tissues

  • Jérome Solassol,
  • Jeanne Ramos,
  • Evelyne Crapez,
  • Majda Saifi,
  • Alain Mangé,
  • Evelyne Vianès,
  • Pierre-Jean Lamy,
  • Valérie Costes and
  • Thierry Maudelonde

17 May 2011

KRAS mutation has been unambiguously identified as a marker of resistance to cetuximab-based treatment in metastatic colorectal cancer (mCRC) patients. However, most studies of KRAS mutation analysis have been performed using homogenously archived CR...

(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
  • Review
  • Open Access
49 Citations
10,415 Views
15 Pages

17 May 2011

Intrinsically disordered proteins (IDPs) are proteins that usually do not adopt well-defined native structures when isolated in solution under physiological conditions. Numerous IDPs have close relationships with human diseases such as tumor, Parkins...

(This article belongs to the Section Biochemistry)
  • Review
  • Open Access
51 Citations
15,480 Views
17 Pages

Evolution of Plant-Made Pharmaceuticals

  • David R. Thomas,
  • Claire A. Penney,
  • Amrita Majumder and
  • Amanda M. Walmsley

17 May 2011

The science and policy of pharmaceuticals produced and/or delivered by plants has evolved over the past twenty-one years from a backyard remedy to regulated, purified products. After seemingly frozen at Phase I human clinical trials with six orally d...

(This article belongs to the Special Issue Plant-Derived Pharmaceuticals by Molecular Farming)
  • Communication
  • Open Access
11 Citations
7,431 Views
13 Pages

17 May 2011

The lysophospholipids sphingosine 1-phosphate (S1P) and lysophosphatidic acid (LPA) act via G-protein coupled receptors S1P1–5 and LPA1–3 respectively, and are implicated in allergy. Eosinophils accumulate at innervating cholinergic nerves in asthma...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
72 Citations
10,005 Views
12 Pages

Enhancing Effect of Glycerol on the Tensile Properties of Bombyx mori Cocoon Sericin Films

  • Haiping Zhang,
  • Lianxia Deng,
  • Mingying Yang,
  • Sijia Min,
  • Lei Yang and
  • Liangjun Zhu

16 May 2011

An environmental physical method described herein was developed to improve the tensile properties of Bombyx mori cocoon sericin films, by using the plasticizer of glycerol, which has a nontoxic effect compared with other chemical crosslinkers. The ch...

(This article belongs to the Section Materials Science)
  • Article
  • Open Access
23 Citations
8,099 Views
9 Pages

16 May 2011

A new homologous series (ten compounds) of 2-hydroxy azo compounds SRn (where n:1–10) were synthesized. Their structures were elucidated using spectroscopic techniques such as IR (Infrared), 1H-NMR as well as elemental analysis. Mesomorphic propertie...

(This article belongs to the Section Materials Science)
  • Review
  • Open Access
1,315 Citations
49,998 Views
16 Pages

Inflammation, Oxidative Stress, and Obesity

  • Alba Fernández-Sánchez,
  • Eduardo Madrigal-Santillán,
  • Mirandeli Bautista,
  • Jaime Esquivel-Soto,
  • Ángel Morales-González,
  • Cesar Esquivel-Chirino,
  • Irene Durante-Montiel,
  • Graciela Sánchez-Rivera,
  • Carmen Valadez-Vega and
  • José A. Morales-González

13 May 2011

Obesity is a chronic disease of multifactorial origin and can be defined as an increase in the accumulation of body fat. Adipose tissue is not only a triglyceride storage organ, but studies have shown the role of white adipose tissue as a producer of...

(This article belongs to the Special Issue Antioxidants)
  • Article
  • Open Access
116 Citations
13,418 Views
15 Pages

13 May 2011

We have previously shown a tissue-specific increase in oxidative stress in the early stages of streptozotocin (STZ)-induced diabetic rats. In this study, we investigated oxidative stress-related long-term complications and mitochondrial dysfunctions...

(This article belongs to the Special Issue Oxidative Stress and Mitochondria)
  • Article
  • Open Access
311 Citations
14,440 Views
14 Pages

13 May 2011

The contributions of individual amino acid residues or groups of amino acids to antioxidant activities of some food protein hydrolysates were investigated using partial least squares (PLS) regression method. PLS models were computed with amino acid c...

(This article belongs to the Special Issue Recent Advances in QSAR/QSPR Theory)
  • Article
  • Open Access
7 Citations
8,634 Views
8 Pages

13 May 2011

The electronic properties of Te doped-ZnSb systems are investigated by first-principles calculations. We focus on the Zn64Sb64−xTex systems (x = 0, 2, 3, 4), which respond to the 0, 1.56at%, 2.34at% and 3.12at% of Te doping concentration. We confirm...

(This article belongs to the Special Issue Atoms in Molecules and in Nanostructures)
  • Article
  • Open Access
55 Citations
13,505 Views
17 Pages

Genetic Diversity and Phylogeny of Antagonistic Bacteria against Phytophthora nicotianae Isolated from Tobacco Rhizosphere

  • Fengli Jin,
  • Yanqin Ding,
  • Wei Ding,
  • M.S. Reddy,
  • W.G. Dilantha Fernando and
  • Binghai Du

12 May 2011

The genetic diversity of antagonistic bacteria from the tobacco rhizosphere was examined by BOXAIR-PCR, 16S-RFLP, 16S rRNA sequence homology and phylogenetic analysis methods. These studies revealed that 4.01% of the 6652 tested had some inhibitory a...

(This article belongs to the Section Biochemistry)
  • Review
  • Open Access
12 Citations
10,282 Views
13 Pages

Antioxidant Properties of Aminoethylcysteine Ketimine Decarboxylated Dimer: A Review

  • Alberto Macone,
  • Mario Fontana,
  • Marco Barba,
  • Bruno Botta,
  • Mirella Nardini,
  • Francesca Ghirga,
  • Andrea Calcaterra,
  • Laura Pecci and
  • Rosa Marina Matarese

12 May 2011

Aminoethylcysteine ketimine decarboxylated dimer is a natural sulfur-containing compound detected in human plasma and urine, in mammalian brain and in many common edible vegetables. Over the past decade many studies have been undertaken to identify i...

(This article belongs to the Special Issue Antioxidants)
  • Article
  • Open Access
84 Citations
11,315 Views
17 Pages

12 May 2011

The formation of a self-sustaining autocatalytic chemical network is a necessary but not sufficient condition for the origin of life. The question of whether such a network could form “by chance” within a sufficiently complex suite of molecules and r...

(This article belongs to the Special Issue Origin of Life 2011)
  • Article
  • Open Access
7 Citations
9,337 Views
15 Pages

12 May 2011

The study aims to present a detailed theoretical investigation of noncovalent intermolecular interactions between different π–π stacking nitrogen substituted phenothiazine derivatives by applying second-order Møller-Plesset perturbation (MP2), densit...

(This article belongs to the Special Issue Advances in Molecular Electronic Structure Calculations)
  • Article
  • Open Access
6 Citations
8,898 Views
16 Pages

11 May 2011

The hedgehog signal pathway is an essential agent in developmental patterning, wherein the local concentration of the Hedgehog morphogens directs cellular differentiation and expansion. Furthermore, the Hedgehog pathway has been implicated in tumor/s...

(This article belongs to the Section Physical Chemistry, Theoretical and Computational Chemistry)
  • Communication
  • Open Access
18 Citations
8,256 Views
8 Pages

11 May 2011

The effects of high pressure (to 600 MPa) at different temperatures (20 to 60 °C) for 20 min on protein solubilization and electrophoretic pattern in beef post-rigor longissimus dorsi muscle were studied. The results showed that protein solubilizatio...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
71 Citations
12,069 Views
13 Pages

11 May 2011

In order to improve its stability and catalytic rate in flour, the immobilization of glucose oxidase (GOX) was investigated in this work. The enzyme was encapsulated in calcium alginate-chitosan microspheres (CACM) using an emulsification-internal ge...

(This article belongs to the Section Materials Science)
  • Article
  • Open Access
10 Citations
7,847 Views
12 Pages

10 May 2011

The active metabolite of the novel immunosuppressive agent leflunomide has been shown to inhibit the enzyme dihydroorotate dehydrogenase (DHODH). This enzyme catalyzes the fourth step in de novo pyrimidine biosynthesis. Self-organizing molecular fiel...

(This article belongs to the Section Physical Chemistry, Theoretical and Computational Chemistry)
  • Article
  • Open Access
32 Citations
8,578 Views
12 Pages

Knockdown of Akt Sensitizes Osteosarcoma Cells to Apoptosis Induced by Cisplatin Treatment

  • Guoyou Zhang,
  • Ming Li,
  • Xiaodong Zhu,
  • Yushu Bai and
  • Changwei Yang

10 May 2011

Akt plays an important role in the inhibition of apoptosis induced by chemotherapy and other stimuli. We therefore investigated if knockdown of Akt2 promoted drug-induced apoptosis in cultured osteosarcoma cells in vitro. SAOS-2 cells were transfecte...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
153 Citations
16,787 Views
12 Pages

10 May 2011

Mulberry is one of the most widely used traditional Chinese medicines. Anthocyanins are the main bioactive components of mulberry, and possess important biological activities, such as antimicrobial, anti-inflammatory and antioxidant activities. This...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
36 Citations
12,254 Views
10 Pages

First-Principles Investigation of Ag-Doped Gold Nanoclusters

  • Xiao-Dong Zhang,
  • Mei-Li Guo,
  • Di Wu,
  • Pei-Xun Liu,
  • Yuan-Ming Sun,
  • Liang-An Zhang,
  • Yi She,
  • Qing-Fen Liu and
  • Fei-Yue Fan

9 May 2011

Gold nanoclusters have the tunable optical absorption property, and are promising for cancer cell imaging, photothermal therapy and radiotherapy. First-principle is a very powerful tool for design of novel materials. In the present work, structural p...

(This article belongs to the Special Issue Advances in Molecular Electronic Structure Calculations)
  • Communication
  • Open Access
35 Citations
8,993 Views
12 Pages

d-(+)-Galactose-Conjugated Single-Walled Carbon Nanotubes as New Chemical Probes for Electrochemical Biosensors for the Cancer Marker Galectin-3

  • Young Kum Park,
  • Bayarmaa Bold,
  • Woo Kyung Lee,
  • Min Hyon Jeon,
  • Kay Hyeok An,
  • Seung Yol Jeong and
  • Young Key Shim

5 May 2011

d-(+)-Galactose-conjugated single-walled carbon nanotubes (SWCNTs) were synthesized for use as biosensors to detect the cancer marker galectin-3. To investigate the binding of galectin-3 to the d-(+)-galactose-conjugated SWCNTs, an electrochemical bi...

(This article belongs to the Section Materials Science)
  • Article
  • Open Access
105 Citations
13,691 Views
14 Pages

Polyphenolic Contents and Antioxidant Potential of Stem Bark Extracts from Jatropha curcas (Linn)

  • Osamuyimen O. Igbinosa,
  • Isoken H. Igbinosa,
  • Vincent N. Chigor,
  • Olohirere E. Uzunuigbe,
  • Sunday O. Oyedemi,
  • Emmanuel E. Odjadjare,
  • Anthony I. Okoh and
  • Etinosa O. Igbinosa

5 May 2011

We assessed the polyphenolic contents and antioxidant potential of the aqueous, ethanol and methanol stem bark extracts of Jatropha curcas. The total phenol, flavonoids, flavonols and proanthocyanidin contents of the extracts were evaluated to determ...

(This article belongs to the Special Issue Antioxidants)
  • Article
  • Open Access
48 Citations
10,015 Views
18 Pages

A Newly Isolated Thermostable Lipase from Bacillus sp.

  • Fairolniza Mohd Shariff,
  • Raja Noor Zaliha Raja Abd. Rahman,
  • Mahiran Basri and
  • Abu Bakar Salleh

4 May 2011

A thermophilic lipolytic bacterium identified as Bacillus sp. L2 via 16S rDNA was previously isolated from a hot spring in Perak, Malaysia. Bacillus sp. L2 was confirmed to be in Group 5 of bacterial classification, a phylogenically and phenotypicall...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
75 Citations
11,745 Views
11 Pages

4 May 2011

Flavonoids and phenolics are abundant in loquat flowers. Methanol had the highest extraction efficiency among five solvents, followed by ethanol. Considering the safety and residue, ethanol is better as extraction solvent. The average content of flav...

(This article belongs to the Section Biochemistry)
  • Review
  • Open Access
38 Citations
17,405 Views
38 Pages

Conformationally Constrained Histidines in the Design of Peptidomimetics: Strategies for the χ-Space Control

  • Azzurra Stefanucci,
  • Francesco Pinnen,
  • Federica Feliciani,
  • Ivana Cacciatore,
  • Gino Lucente and
  • Adriano Mollica

3 May 2011

A successful design of peptidomimetics must come to terms with χ-space control. The incorporation of χ-space constrained amino acids into bioactive peptides renders the χ1 and χ2 torsional angles of pharmacophore amino acids critical for activity and...

(This article belongs to the Section Molecular Recognition)
  • Review
  • Open Access
5 Citations
9,149 Views
10 Pages

3 May 2011

The helical shape of the thin filaments causes their passive counterclockwise rotation during muscle stretch that increases tensile stress and torque at first by unwinding and then by winding up the four anchoring Z-filaments. This means storage of e...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
11 Citations
8,331 Views
16 Pages

3 May 2011

Divalent metal ions are essential for the efficient catalysis and structural stability of many nucleotidyl-transfer enzymes. Poly(A)-specific ribonuclease (PARN) belongs to the DEDD superfamily of 3'-exonucleases, and the active site of PARN contains...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
42 Citations
13,856 Views
14 Pages

29 April 2011

Elastin-like peptide (ELP) was fused to two different avian flu H5N1 antigens and expressed in transgenic tobacco plants. The presence of the ELP tag enhanced the accumulation of the heterologous proteins in the tobacco leaves. An effective membran...

(This article belongs to the Special Issue Plant-Derived Pharmaceuticals by Molecular Farming)
  • Article
  • Open Access
103 Citations
12,186 Views
20 Pages

In Vitro Antioxidant Activity of Selected 4-Hydroxy-chromene-2-one Derivatives—SAR, QSAR and DFT Studies

  • Milan Mladenović,
  • Mirjana Mihailović,
  • Desanka Bogojević,
  • Sanja Matić,
  • Neda Nićiforović,
  • Vladimir Mihailović,
  • Nenad Vuković,
  • Slobodan Sukdolak and
  • Slavica Solujić

29 April 2011

The series of fifteen synthesized 4-hydroxycoumarin derivatives was subjected to antioxidant activity evaluation in vitro, through total antioxidant capacity, 1,1-diphenyl-2-picryl-hydrazyl (DPPH), hydroxyl radical, lipid peroxide scavenging and chel...

(This article belongs to the Special Issue Recent Advances in QSAR/QSPR Theory)
  • Short Note
  • Open Access
13 Citations
8,363 Views
11 Pages

Serine Proteases-Like Genes in the Asian Rice Gall Midge Show Differential Expression in Compatible and Incompatible Interactions with Rice

  • Deepak Kumar Sinha,
  • Mulagondla Lakshmi,
  • Ghanta Anuradha,
  • Shaik J. Rahman,
  • Ebrahimali A. Siddiq,
  • Jagadish S. Bentur and
  • Suresh Nair

29 April 2011

The Asian rice gall midge, Orseolia oryzae (Wood-Mason), is a serious pest of rice. Investigations into the gall midge-rice interaction will unveil the underlying molecular mechanisms which, in turn, can be used as a tool to assist in developing suit...

(This article belongs to the Section Biochemistry)
  • Article
  • Open Access
18 Citations
8,543 Views
14 Pages

28 April 2011

Past research has demonstrated that oestrogenic compounds produce strand breaks in the DNA of sperm and lymphocytes via reactive oxygen species (ROS). In the current investigation, sperm and lymphocytes were treated in vitro with oestrogenic compound...

(This article belongs to the Special Issue Advances in Molecular Toxicology)
  • Article
  • Open Access
7 Citations
9,791 Views
11 Pages

28 April 2011

The deficiency of human carbonic anhydrase II (HCAII) has been recognized to be associated with a disease called CAII deficiency syndrome (CADS). Among the many mutations, the P237H mutation has been characterized to lead to a significant decrease in...

(This article belongs to the Special Issue Protein Folding 2011)
  • Article
  • Open Access
24 Citations
8,368 Views
14 Pages

Phenols in Leaves and Bark of Fagus sylvatica as Determinants of Insect Occurrences

  • Panos V. Petrakis,
  • Kostas Spanos,
  • Alan Feest and
  • Evangelia Daskalakou

26 April 2011

Beech forests play an important role in temperate and north Mediterranean ecosystems in Greece since they occupy infertile montane soils. In the last glacial maximum, Fagus sylvatica (beech) was confined to Southern Europe where it was dominant and i...

(This article belongs to the Section Biochemistry)
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Int. J. Mol. Sci. - ISSN 1422-0067