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Keywords = hydrogenotrophic methanogens

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19 pages, 2131 KB  
Article
Effects of Temperature and Organic Loading Rates on the Performance of an Anaerobic Sequencing Batch Reactor (ASBR) Treating High-Strength Food Waste Wastewater
by Xueyang Ma, Xingguo Wu, Ruotong Liu, Penghui Chen, Quanyuan Wei and Jianbin Guo
Water 2026, 18(11), 1313; https://doi.org/10.3390/w18111313 - 29 May 2026
Viewed by 356
Abstract
In 2024, China generated approximately 130 million tons of food waste. This study focuses on food wastewater characterized by exceptionally high organic strength (chemical oxygen demand (COD) > 80 g·L−1, total suspended solids (TSS) > 20 g·L−1) content. Conventional [...] Read more.
In 2024, China generated approximately 130 million tons of food waste. This study focuses on food wastewater characterized by exceptionally high organic strength (chemical oxygen demand (COD) > 80 g·L−1, total suspended solids (TSS) > 20 g·L−1) content. Conventional continuous stirred tank reactors (CSTRs) inherently couple hydraulic retention time (HRT) and sludge retention time (SRT), making them prone to microbial washout under high organic loading. To overcome this limitation, this study employed two anaerobic sequencing batch reactors (ASBRs) for treating such high-strength food wastewater. This study systematically evaluated the impacts of temperature (mesophilic: 37 °C and thermophilic: 55 °C) and organic loading rate (OLR) on fermentation performance. Under stable operation (OLR = 5.6 kgCOD·m−3·d−1; HRT = 16 days), the mesophilic ASBR achieved a specific methane yield of 307 mL CH4·gCODremoved−1, an average COD removal efficiency of 81%, and a volatile fatty acids-to-total alkalinity (VFA/TA) ratio of 0.2, indicating robust process stability. In contrast, the thermophilic ASBR exhibited a VFA/TA ratio of 0.5, signaling incipient acidification. Microbial community analysis revealed significantly higher bacterial and archaeal alpha diversity in the mesophilic system. Notably, Methanothrix—a versatile acetoclastic methanogen—dominated the mesophilic archaeal community (66.65%), conferring functional redundancy and resilience against organic shock loads. By contrast, the thermophilic system was overwhelmingly dominated by the hydrogenotrophic Methanothermobacter (99.28%), resulting in low functional diversity and structural fragility. Compared with a benchmark mesophilic CSTR (specific methane yield: 276 mL CH4·gCODremoved−1; COD removal efficiency: 70.6%), the mesophilic ASBR improved methane yield by 11%, COD removal efficiency by 15%, and operational stability (VFA/TA = 0.2 vs. 0.6). This work addresses a gap in ASBR applications for high-strength food wastewater treatment and provides experimental validation of the performance, stability, and scalability of mesophilic ASBRs. The proposed process represents a technically feasible, resource-efficient, and operationally robust solution for the valorization of organic wastewater with COD > 80 g·L−1 and TSS > 20 g·L−1. Full article
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21 pages, 1604 KB  
Article
Enhancing Hydrogenotrophic Methanation in a Bentonite-Amended Bubble Reactor Under Mesophilic Conditions
by Apostolos Spyridonidis and Katerina Stamatelatou
Energies 2026, 19(7), 1613; https://doi.org/10.3390/en19071613 - 25 Mar 2026
Viewed by 416
Abstract
This study explores the use of bentonite to enhance biological biogas upgrading in a bubble reactor (BR) operated under mesophilic conditions (39 ± 1 °C). The experimental setup consisted of a 2 L vertically oriented BR (height-to-diameter ratio 16:1) fed with a synthetic [...] Read more.
This study explores the use of bentonite to enhance biological biogas upgrading in a bubble reactor (BR) operated under mesophilic conditions (39 ± 1 °C). The experimental setup consisted of a 2 L vertically oriented BR (height-to-diameter ratio 16:1) fed with a synthetic gas mixture (60% H2, 15% CO2, 25% CH4, v/v) at a gas recirculation rate of 4 L LR−1 h−1. The aim was to overcome hydrogen’s low gas–liquid mass transfer rate while avoiding the operational challenges typically associated with trickle-bed reactors (TBR). Bentonite increases the density and hydrostatic pressure of the liquid medium and likely alters its rheology, thereby extending the gas–liquid contact time without requiring elevated pressures or intensive gas recirculation. Additionally, bentonite is expected to provide microstructural support that promotes the formation of biofilm-like communities, creating favorable microenvironments for hydrogenotrophic methanogens. As a clay-based additive, bentonite may also contribute to improved process stability through adsorption of inhibitory compounds, enhanced biomass retention, and pH buffering. Under mesophilic conditions, the bentonite-modified BR achieved a methane production rate of 2.17 ± 0.06 LCH4 LR−1 d−1 at a gas retention time of 1.49 h, with methane purity reaching 96.25%. In comparison, a previously reported mesophilic BR operated under an identical reactor configuration and operating conditions but without bentonite exhibited substantially lower methane production rates, supporting the beneficial role of bentonite in biological methanation. The findings highlight bentonite’s potential dual role (physical and biological) in improving process efficiency and stability in biological methanation. Full article
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21 pages, 1458 KB  
Review
Microbial Metabolic Pathways for Synergistic Biomethane Augmentation and CO2 Sequestration in Coalbed Systems: A Mini-Review
by Yang Li, Longxi Shuai and Qian Zhang
Microorganisms 2026, 14(3), 566; https://doi.org/10.3390/microorganisms14030566 - 2 Mar 2026
Viewed by 873
Abstract
Natural gas represents a pivotal transitional clean energy resource, and biogenic coalbed methane (CBM) is ubiquitously distributed in coal reservoirs worldwide. In the context of carbon neutrality targets and the growing demand for large-scale commercial CBM exploitation, innovative technological solutions are urgently required. [...] Read more.
Natural gas represents a pivotal transitional clean energy resource, and biogenic coalbed methane (CBM) is ubiquitously distributed in coal reservoirs worldwide. In the context of carbon neutrality targets and the growing demand for large-scale commercial CBM exploitation, innovative technological solutions are urgently required. CBM bioengineering aims to substantially enhance CBM production by stimulating biomethane generation, promoting gas desorption, and improving reservoir permeability, while simultaneously enabling effective CO2 sequestration. The potential for biomethane generation is largely governed by the intrinsic physicochemical characteristics of coal, including aromatic structures, maceral composition, and pore–fracture architecture. In addition, hydrogeological conditions—such as geothermal gradients, pH variability, and redox potential—play critical roles in regulating microbial functional gene expression and metabolic enzyme synthesis. Core pretreatment strategies in coalbed gas bioengineering can be broadly classified into approaches that enhance coal bioconversion potential and those that optimize functional microbial consortia. Electric fields and conductive materials can influence microbial community structure by enriching electroactive microorganisms and facilitating interspecies electron transfer. In addition to engineered conductive interventions, reservoir environmental conditions also play an important role in shaping methanogenic community structure. Experimental observations under reservoir-relevant CO2 pressure and temperature conditions indicate that deep coalbed environments are associated with shifts in methanogenic community composition, including an increased relative abundance of hydrogenotrophic methanogens. These observations suggest that physicochemical conditions in deep coal seams may favor hydrogen-dependent CO2 reduction pathways, thereby supporting hydrogenotrophic methanogenesis and contributing to biomethane generation. The integration of supercritical CO2 with microbially acclimated stimulation fluids as an innovative reservoir fracturing strategy offers multiple advantages, including effective reservoir stimulation, permanent carbon sequestration, and sustainable biomethane generation. Future research should focus on modulating coal matrix bioavailability, optimizing microbial consortia, enhancing interspecies metabolic synergies, and advancing carbon fixation bioprocesses to facilitate the large-scale implementation of coalbed gas bioengineering systems. This review synthesizes recent advances in microbially mediated CBM enhancement and CO2 sequestration, with a particular focus on field-scale evidence and the key challenges that must be addressed for large-scale implementation. Full article
(This article belongs to the Section Microbial Biotechnology)
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11 pages, 1241 KB  
Article
Substrate Composition Shapes Methanogenesis, Microbial Ecology, and Digestate Dewaterability in Microbial Electrolysis Cell-Assisted Anaerobic Digestion of Food Waste
by Jiaojiao Yang, Baihui Cui, Xiaodong Xin, Yves Iradukunda and Wangwang Yan
Methane 2026, 5(1), 2; https://doi.org/10.3390/methane5010002 - 25 Dec 2025
Cited by 1 | Viewed by 1029
Abstract
The compositional heterogeneity of food waste greatly influences its bioconversion in microbial electrolysis cell (MEC)-assisted anaerobic digestion (AD), but the underlying mechanism remains unclear. Therefore, this study assessed two typical food wastes, i.e., starch-rich rice and cellulose-rich vegetables, on methane production, microbial constituents, [...] Read more.
The compositional heterogeneity of food waste greatly influences its bioconversion in microbial electrolysis cell (MEC)-assisted anaerobic digestion (AD), but the underlying mechanism remains unclear. Therefore, this study assessed two typical food wastes, i.e., starch-rich rice and cellulose-rich vegetables, on methane production, microbial constituents, and digestate dewaterability in single-chamber MECs. The results demonstrated that, while the rice-fed MEC (258.56 mL/g VS) achieved a higher methane yield compared to the vegetable-fed MEC (161.79 mL/g VS), the latter achieved higher methane purity. Temporal profiles of volatile fatty acids (VFAs) revealed rapid acidification and consumption in rice-fed systems, whereas vegetable-fed MEC exhibited delayed degradation. Additionally, the substrate type greatly influenced digestate dewaterability, since digestate from the vegetable-fed MEC exhibited lower specific resistance to filtration (3.25 × 1012 m/kg vs. 12.46 × 1012 m/kg) and capillary suction time (8.16 s·L/g vs. 19.14 s·L/g) compared to that from the rice-fed MEC. This improvement was likely attributed to high polysaccharides in extracellular polymeric substances (EPS) and cellulose’s structural properties, which promoted the formation of a porous, less compressible sludge cake that facilitated sludge dewaterability. Microbial community analysis revealed a substrate-driven specialization, as the rice-fed MECs enriched exoelectrogens (e.g., Geobacter, Trichococcus) and hydrogenotrophic methanogens (i.e., Methanobacterium), while the vegetables enriched Bacteroides and Methanosarcina. Collectively, these results suggest substrate composition profoundly influences methane yield, metabolic pathways, microbial ecology, and digestate properties in MEC-assisted AD. This work provides key insights into the role of feedstock characteristics in shaping MEC-assisted AD systems. Full article
(This article belongs to the Special Issue Innovations in Methane Production from Anaerobic Digestion)
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20 pages, 2770 KB  
Article
Spatial Multi-Omics Analysis of the Qianqiu Goat Gut Microbiome and Metabolome
by Panpan Guo, Wenjuan Qin, Wencheng Song and Hongquan Chen
Int. J. Mol. Sci. 2025, 26(24), 11815; https://doi.org/10.3390/ijms262411815 - 7 Dec 2025
Cited by 1 | Viewed by 985
Abstract
This study profiled the rumen (RM), small intestine (SI), and large intestine (LI) of 24 samples collected from eight 6-month-old Qianqiu goats (body weight 28.40 ± 1.80 kg), with the samples equally divided into three groups. A combination of methods was used, including [...] Read more.
This study profiled the rumen (RM), small intestine (SI), and large intestine (LI) of 24 samples collected from eight 6-month-old Qianqiu goats (body weight 28.40 ± 1.80 kg), with the samples equally divided into three groups. A combination of methods was used, including 16S rRNA sequencing, untargeted liquid chromatography–mass spectrometry (LC-MS) metabolomics, Orthogonal Partial Least Squares Discriminant Analysis (OPLS-DA), Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment, and weighted gene co-expression network analysis-based module detection (WGCNA) with network integration. An uncommon composition of organisms dominated the SI: the hydrogenotrophic methanogens Methanobrevibacter (SI 24.51%; RM 1.92%; LI 2.19%) and Methanosphaera (SI 0.43%; RM 0.02%; LI 0.02%), together with the acetogen Acetitomaculum (SI 1.58%; RM 0.34%; LI 0.11%), were markedly more abundant compared to the RM or LI. Correlation and pathway analyses indicated that Methanobrevibacter was positively correlated with a steroid-type lipid metabolite (r = 0.52, p < 0.05) and with bile-acid-related metabolites. Acetitomaculum was positively correlated with several metabolites: 4-Hydroxyphenyl 4-hydroxybenzoate (r = 0.79, p < 0.05), 2-Aminoethyl dihydrogen phosphate (r = 0.76, p < 0.05), 1-Myristoyl-2-stearoyl-sn-glycero-3-phosphocholine (r = 0.76, p < 0.05), and 1,2-Dioleoyl-sn-Glycero-3-Phosphocholine (r = 0.74, p < 0.05). Together, these data define a small-intestinal microbial–metabolite module in Qianqiu goats characterized by elevated abundances of specific methanogens and acetogens in the SI. Specific positive correlations were identified between these taxa and metabolites associated with lipids and bile acids. Full article
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28 pages, 1153 KB  
Review
Kinetics and Energy Yield in Anaerobic Digestion: Effects of Substrate Composition and Fundamental Operating Conditions
by Krzysztof Pilarski and Agnieszka A. Pilarska
Energies 2025, 18(23), 6262; https://doi.org/10.3390/en18236262 - 28 Nov 2025
Cited by 8 | Viewed by 2069
Abstract
This review relates the kinetics of anaerobic digestion (AD) to energy outcomes, including typical ranges of methane yields and volumetric methane productivities (down to hourly g L−1 h−1 scales relevant for industrial plants). It further translates these relationships into practical control [...] Read more.
This review relates the kinetics of anaerobic digestion (AD) to energy outcomes, including typical ranges of methane yields and volumetric methane productivities (down to hourly g L−1 h−1 scales relevant for industrial plants). It further translates these relationships into practical control principles that support stable, high methane productivity. Evidence spans substrate selection and co-digestion with emphasis on carbon/nitrogen (C/N) balance, pretreatment strategies, and reactor operation, linking process constraints with operating parameters to identify interventions that raise performance while limiting inhibition. Improving substrate accessibility is the primary step: pretreatment and co-digestion shift limitation beyond hydrolysis and allow safe increases in organic loading. Typical mesophilic operation involves hydraulic retention times of about 10–40 days for food waste and 20–60 days for different types of livestock manure and slowly degradable energy crops, with stable performance achieved when the solids retention time (SRT) is maintained longer than the hydraulic retention time (HRT). Stability is further governed by sustaining a low hydrogen partial pressure through hydrogenotrophic methanogenesis. Temperature and pH define practicable operating ranges; meanwhile, mixing should minimise diffusion resistance without damaging biomass structure. Early-warning indicators—volatile fatty acids (VFAs)/alkalinity, the propionate/acetate ratio, specific methanogenic activity, methane (CH4)% and gas flow—enable timely adjustment of loading, retention, buffering, mixing intensity and micronutrient supply (Ni, Co, Fe, Mo). In practice, robust operation is generally associated with VFA/alkalinity ratios below about 0.3 and CH4 contents typically in the range of 50–70% (v/v) in biogas. The review consolidates typical feedstock characteristics and biochemical methane potential (BMP) ranges, as well as outlines common reactor types with their advantages and limitations, linking operational choices to energy yield in combined heat and power (CHP) and biomethane pathways. Reported pretreatment effects span approximately 20–100% higher methane yields; for example, 18–37% increases after mechanical size reduction, around 20–30% gains at 120–121 °C for thermal treatments, and in some cases nearly a two-fold increase for more severe thermal or combined methods. Priorities are set for adaptive control, micronutrient management, biomass-retention strategies, and standardised monitoring, providing a coherent route from kinetic understanding to dependable energy performance and explaining how substrate composition, pretreatment, operating parameters, and kinetic constraints jointly determine methane and energy yield, with particular emphasis on early-warning indicators. Full article
(This article belongs to the Special Issue New Challenges in Biogas Production from Organic Waste)
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14 pages, 2505 KB  
Article
Coupling Granular Activated Carbon with Waste Iron Scraps Enhances Anaerobic Digestion of PBAT Wastewater: Performance Improvement and Mechanistic Insights
by Chunhua He, Jingjing Wen, Zhiqiang Huang, Qilong Jin, Ziyao Li, Hua Zhang, Houyun Yang, Jian Huang, Wei Wang and Hao Hu
Fermentation 2025, 11(11), 614; https://doi.org/10.3390/fermentation11110614 - 28 Oct 2025
Viewed by 1283
Abstract
Poly(butylene adipate-co-terephthalate) (PBAT) wastewater, characterized by high chemical oxygen demand (COD) and acidity, poses significant challenges to anaerobic digestion (AD) due to toxicity and volatile fatty acids (VFAs) accumulation. This study coupled granular activated carbon (GAC) and waste iron scraps (WISs) to synergistically [...] Read more.
Poly(butylene adipate-co-terephthalate) (PBAT) wastewater, characterized by high chemical oxygen demand (COD) and acidity, poses significant challenges to anaerobic digestion (AD) due to toxicity and volatile fatty acids (VFAs) accumulation. This study coupled granular activated carbon (GAC) and waste iron scraps (WISs) to synergistically enhance AD performance. Batch experiments demonstrated that, compared with the control, the GAC/WISs group achieved a COD removal efficiency of 53.18% and a methane production of 207.53 ± 5.80 mL/g COD, which were 5.48- and 12.14-fold increases, respectively, while reducing the accumulation of total VFAs by 98.48% (to 15.09 mg/L). Mechanistic analysis revealed that GAC adsorbed inhibitors and enriched methanogens, while WISs buffered pH and promoted direct interspecies electron transfer (DIET) through hydrogenotrophic methanogenesis. Metagenomic sequencing showed shifts in microbial communities, with enrichment of syntrophic bacteria (Syntrophobacter) and functional genes (pta, bcd, and pccA), indicating metabolic reprogramming. This study provided a theoretical foundation and engineering strategy for the anaerobic treatment of PBAT wastewater. Full article
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32 pages, 2165 KB  
Review
Biogeochemical Interactions and Their Role in European Underground Hydrogen Storage
by Frank E. Viveros, Na Liu and Martin A. Fernø
Minerals 2025, 15(9), 929; https://doi.org/10.3390/min15090929 - 1 Sep 2025
Cited by 6 | Viewed by 2764
Abstract
Integrating renewable energy requires robust, large-scale storage solutions to balance intermittent supply. Underground hydrogen storage (UHS) in geological formations, such as salt caverns, depleted hydrocarbon reservoirs, or aquifers, offers a promising way to store large volumes of energy for seasonal periods. This review [...] Read more.
Integrating renewable energy requires robust, large-scale storage solutions to balance intermittent supply. Underground hydrogen storage (UHS) in geological formations, such as salt caverns, depleted hydrocarbon reservoirs, or aquifers, offers a promising way to store large volumes of energy for seasonal periods. This review focuses on the biological aspects of UHS, examining the biogeochemical interactions between H2, reservoir minerals, and key hydrogenotrophic microorganisms such as sulfate-reducing bacteria, methanogens, acetogens, and iron-reducing bacteria within the gas–liquid–rock–microorganism system. These microbial groups use H2 as an electron donor, triggering biogeochemical reactions that can affect storage efficiency through gas loss and mineral dissolution–precipitation cycles. This review discusses their metabolic pathways and the geochemical interactions driven by microbial byproducts such as H2S, CH4, acetate, and Fe2+ and considers biofilm formation by microbial consortia, which can further change the petrophysical reservoir properties. In addition, the review maps 76 ongoing European projects focused on UHS, showing 71% target salt caverns, 22% depleted hydrocarbon reservoirs, and 7% aquifers, with emphasis on potential biogeochemical interactions. It also identifies key knowledge gaps, including the lack of in situ kinetic data, limited field-scale monitoring of microbial activity, and insufficient understanding of mineral–microbe interactions that may affect gas purity. Finally, the review highlights the need to study microbial adaptation over time and the influence of mineralogy on tolerance thresholds. By analyzing these processes across different geological settings and integrating findings from European research initiatives, this work evaluates the impact of microbial and geochemical factors on the safety, efficiency, and long-term performance of UHS. Full article
(This article belongs to the Special Issue Mineral Dissolution and Precipitation in Geologic Porous Media)
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16 pages, 1398 KB  
Article
Gas Substrate Effects on Hydrogenotrophic Biomethanation in Flocculent and Granular Sludge Systems
by Sıdıka Tuğçe Kalkan
Sustainability 2025, 17(17), 7667; https://doi.org/10.3390/su17177667 - 25 Aug 2025
Viewed by 1892
Abstract
The biotechnological conversion of CO2 to biomethane represents an energy-efficient, environmentally friendly, and sustainable approach within the waste-to-energy cycle. This process, in which CO2 and H2 are converted to biomethane in anaerobic bioreactors, is referred to as hydrogenotrophic biomethane production. [...] Read more.
The biotechnological conversion of CO2 to biomethane represents an energy-efficient, environmentally friendly, and sustainable approach within the waste-to-energy cycle. This process, in which CO2 and H2 are converted to biomethane in anaerobic bioreactors, is referred to as hydrogenotrophic biomethane production. While several studies have investigated hydrogenotrophic biomethane production, there is a lack of research comparing flocculent and granular sludge inoculum in continuously operated systems fed with a gas substrate. Both granular and flocculent sludge possess distinct advantages: granular sludge offers higher density, stronger microbial cohesion, and superior settling performance, whereas flocculent sludge provides faster substrate accessibility and more rapid initial microbial activity. In this study, two UASB (Upflow Anaerobic Sludge Blanket) reactors operated under mesophilic conditions were continuously fed with synthetic off-gas composed of pure H2 and CO2 in a 4:1 ratio and were compared in terms of microbial community shifts and their effects on hydrogenotrophic biomethane production. Biomethane production reached 75 ± 2% in the granular sludge reactor, significantly higher than the 64 ± 1.3% obtained with flocculent sludge. Although hydrogen consumption did not differ significantly, the granular sludge reactor exhibited higher CO2 removal efficiency. Microbial analyses further revealed that granular sludge was more effective in supporting methanogenic archaea under conditions of gas substrate feeding. These findings offer advantageous suggestions for improving biogas production, enhancing waste gas management, and advancing sustainable energy generation. Full article
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13 pages, 2084 KB  
Article
Effects of Applied Voltage on the Microbial Communities at the Anode and Cathode During Methane Fermentation
by Hikaru Kaneko, Mitsuhiko Koyama and Hiroyuki Daimon
Fermentation 2025, 11(8), 488; https://doi.org/10.3390/fermentation11080488 - 21 Aug 2025
Cited by 1 | Viewed by 1422
Abstract
This study investigated the effects of applied voltage on methane fermentation using separate reactors for the anode and cathode, with activated carbon felt as electrodes and a constant voltage of 0.7 V. Compared to the control, the cathode reactor exhibited approximately 1.2 times [...] Read more.
This study investigated the effects of applied voltage on methane fermentation using separate reactors for the anode and cathode, with activated carbon felt as electrodes and a constant voltage of 0.7 V. Compared to the control, the cathode reactor exhibited approximately 1.2 times higher methane production and 1.3 times higher methane concentration, whereas the anode reactor showed a reduction to about 0.5 times and 0.8 times, respectively. Microbial analysis revealed that the anode reactor created an electron-accepting environment, promoting the growth of Clostridium sensu stricto 1 and Fastidiosipila, both contributing to organic acid (electron) production. Conversely, the cathode reactor established an electron-donating environment, enhancing methane production by hydrogenotrophic methanogens such as Methanoculleus and Methanobacterium. Although similar methanogen levels were found in the anode reactor, methane production was higher in the cathode reactor. These findings indicate that the anode facilitates organic acid production via electron acceptance, while the cathode acts as an electron donor that promotes hydrogenotrophic methanogenesis. This study provides a clear evaluation of the effects of microbial electrochemical technologies on methane fermentation, demonstrating their potential to stimulate microbial activities and enhance methane production. Full article
(This article belongs to the Section Industrial Fermentation)
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17 pages, 2147 KB  
Article
Enhancing Methanogenic Efficiency in Dry Anaerobic Digestion of Kitchen Waste Through Optimization of Total Solids Content
by Lan Liu, Jiaxi Zheng and Jianwei Liu
Processes 2025, 13(8), 2332; https://doi.org/10.3390/pr13082332 - 23 Jul 2025
Cited by 2 | Viewed by 1231
Abstract
The urbanization-driven surge in kitchen waste necessitates optimized dry anaerobic digestion (DAD; total solids > 15%). Despite its valorization potential, this technology requires efficiency improvements due to mass transfer constraints. This study evaluated TS effects (15%, 20%, or 25%) on methane production. The [...] Read more.
The urbanization-driven surge in kitchen waste necessitates optimized dry anaerobic digestion (DAD; total solids > 15%). Despite its valorization potential, this technology requires efficiency improvements due to mass transfer constraints. This study evaluated TS effects (15%, 20%, or 25%) on methane production. The TS = 20% system achieved peak cumulative methane yield (405.73 ± 11.71 mL/gVS), exceeding TS = 15% (348.09 ± 12.19 mL/gVS) and TS = 25% (293.08 ± 3.55 mL/gVS). This optimization was attributable to synergistic maintenance of metabolic equilibrium through autonomous pH recovery, rapid VFAs degradation, and enhanced TAN tolerance. Conversely, TS = 25% exhibited impaired mass transfer efficiency under high solids, causing VFAs accumulation, ammonia toxicity, and progressive pH decline to 7.5, indicating system destabilization. Organic degradation analysis confirmed superior conversion efficiency in TS = 20% through dynamic SPS–SPN equilibrium. Microbial analysis revealed enhanced metabolic efficiency via synergistic interactions between acetoclastic and hydrogenotrophic methanogens in TS = 20%. This research provides technical parameters for optimizing methane production in kitchen waste DAD systems. Full article
(This article belongs to the Section Environmental and Green Processes)
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19 pages, 3834 KB  
Article
The Effects of Iron-Bearing Minerals on the Community Diversity and Physiological Activity of Prokaryotic Microorganisms in Pit Mud Used for Strong-Flavor baijiu Production
by Kairui Jiao, Bo Deng, Ping Song, Liwei Wang and Bin Lian
Foods 2025, 14(11), 1883; https://doi.org/10.3390/foods14111883 - 26 May 2025
Cited by 2 | Viewed by 1212
Abstract
The quality of strong-flavor baijiu largely depends on the physicochemical properties and prokaryotic microbial activities of pit mud. However, the impact of the iron-bearing minerals in pit mud on its prokaryotic microbial communities remains unknown. This study examined the differences in the prokaryotic [...] Read more.
The quality of strong-flavor baijiu largely depends on the physicochemical properties and prokaryotic microbial activities of pit mud. However, the impact of the iron-bearing minerals in pit mud on its prokaryotic microbial communities remains unknown. This study examined the differences in the prokaryotic communities between 2-year, 40-year, and 100-year pit mud and yellow soil (the raw material for pit mud), as well as the impacts of environmental factors, particularly iron-bearing minerals, on the structure and diversity of these prokaryotic communities. The results indicated that there were significant differences in the composition of prokaryotic microorganisms between yellow soil and pit mud. As the fermentation pit aged, the relative abundance of dominant fermentation bacteria (including Petrimonas, Syntrophomonas, Clostridium, etc.) and hydrogenotrophic methanogens in the pit mud increased. The relative abundance of Lactobacillus in the 2-year pit mud was low (0.33%). Under laboratory conditions, goethite (a typical crystalline iron mineral, denoted as Fec) reduced the physiological and metabolic activity of Lacticaseibacillus paracasei JN01 in a concentration-dependent manner. The results of the physicochemical analysis showed that the contents of total iron (TFe) and Fec significantly decreased, while the contents of Fe(II) and amorphous iron (hydr)oxides (Feo) significantly increased with an increasing fermentation pit age. TFe and Fec were significantly negatively correlated with both the Chao1 and Shannon indexes and functional microorganisms such as Clostridium_sensu_stricto_12, Sedimentibacter, and hydrogenotrophic methanogens. The current results contribute to our understanding of the aging process of pit mud from the perspective of the interaction between iron-bearing minerals and prokaryotic microorganisms. Full article
(This article belongs to the Section Drinks and Liquid Nutrition)
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31 pages, 4371 KB  
Article
Biological, Equilibrium and Photochemical Signatures of C, N and S Isotopes in the Early Earth and Exoplanet Atmospheres
by James R. Lyons
Life 2025, 15(3), 398; https://doi.org/10.3390/life15030398 - 3 Mar 2025
Cited by 1 | Viewed by 2342
Abstract
The unambiguous detection of biosignatures in exoplanet atmospheres is a primary objective for astrobiologists and exoplanet astronomers. The primary methodology is the observation of combinations of gases considered unlikely to coexist in an atmosphere or individual gases considered to be highly biogenic. Earth-like [...] Read more.
The unambiguous detection of biosignatures in exoplanet atmospheres is a primary objective for astrobiologists and exoplanet astronomers. The primary methodology is the observation of combinations of gases considered unlikely to coexist in an atmosphere or individual gases considered to be highly biogenic. Earth-like examples of the former include CH4 and O3, and the latter includes dimethyl sulfide (DMS). To improve the plausibility of the detection of life, I argue that the isotope ratios of key atmospheric species are needed. The C isotope ratios of CO2 and CH4 are especially valuable. On Earth, thermogenesis and volcanism result in a substantial difference in δ13C between atmospheric CH4 and CO2 of ~−25‰. This difference could have changed significantly, perhaps as large as −95‰ after the evolution of hydrogenotrophic methanogens. In contrast, nitrogen fixation by nitrogenase results in a relatively small difference in δ15N between N2 and NH3. Isotopic biosignatures on ancient Earth and rocky exoplanets likely coexist with much larger photochemical signatures. Extreme δ15N enrichment in HCN may be due to photochemical self-shielding in N2, a purely abiotic process. Spin-forbidden photolysis of CO2 produces CO with δ13C < −200‰, as has been observed in the Venus mesosphere. Self-shielding in SO2 may generate detectable 34S enrichment in SO in atmospheres similar to that of WASP-39b. Sufficiently precise isotope ratio measurements of these and related gases in terrestrial-type exoplanet atmospheres will require instruments with significantly higher spectral resolutions and light-collecting areas than those currently available. Full article
(This article belongs to the Special Issue Origin of Life in Chemically Complex Messy Environments: 2nd Edition)
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19 pages, 4145 KB  
Article
Enhanced Anaerobic Digestion Performance Through Acyl Homoserine Lactone-Mediated Quorum Sensing and Supplemental Voltage Regulation
by Jie Zhou, Mingxuan Xu, Diwen Cao, Shuhuan Li, Xiaorui Yang, Weiliang Dong, Honghua Jia and Xiayuan Wu
Fermentation 2025, 11(3), 117; https://doi.org/10.3390/fermentation11030117 - 2 Mar 2025
Cited by 3 | Viewed by 2135
Abstract
Traditional anaerobic digestion (AD) technology continues to have severe limitations in terms of complicated substrate degradation efficiency and methane production. This study optimizes the AD system using corn straw and cattle manure as substrates by introducing an exogenous N-Hexanoyl-L-Homoserine lactone (C6-HSL) signaling molecule [...] Read more.
Traditional anaerobic digestion (AD) technology continues to have severe limitations in terms of complicated substrate degradation efficiency and methane production. This study optimizes the AD system using corn straw and cattle manure as substrates by introducing an exogenous N-Hexanoyl-L-Homoserine lactone (C6-HSL) signaling molecule in concert with an applied external voltage of 0.8 V, systematically investigating its impact on methanogenic performance and microbial community dynamics. The results show that the combined regulation significantly increased methane production (by 29.74%) and substrate utilization rate (by 74.73%) while preventing acid inhibition and ammonia nitrogen inhibition. Mechanistic analysis revealed that the external voltage enhanced the system’s electrocatalytic activity, while the C6-HSL signaling molecule further facilitated the electron transfer efficiency of the biofilm on the electrode. The combined regulation notably enriched hydrogenotrophic methanogens (with Methanobacterium predominating on the cathode and Methanobrevibacter in the digestate), establishing a stable metabolic cooperative network on both the electrode and in the digestate, optimizing the hydrogenotrophic methanogenesis pathway, and enhancing the synergistic effects among microbial communities and system robustness. This study uncovers the synergistic enhancement mechanism of C6-HSL and external voltage, providing new technological pathways and theoretical support for the efficient conversion of low-quality biomass resources and the production of clean energy. Full article
(This article belongs to the Section Industrial Fermentation)
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16 pages, 2318 KB  
Article
Effect of Temperature on the Inocula Preservation, Mesophilic Anaerobic Digestion Start-Up, and Microbial Community Dynamics
by Jingwei Wu, Huan Zhang, Ye Zhao, Xufeng Yuan and Zongjun Cui
Agronomy 2024, 14(12), 2991; https://doi.org/10.3390/agronomy14122991 - 16 Dec 2024
Cited by 7 | Viewed by 3205
Abstract
Anaerobic digestion (AD) is a well-established technology for the sustainable conversion of agricultural organic by-products and waste into bioenergy. Temperature is crucial for optimizing methane production through inocula preservation and reactor start-up in AD. The preservation of inocula induced by temperature has rarely [...] Read more.
Anaerobic digestion (AD) is a well-established technology for the sustainable conversion of agricultural organic by-products and waste into bioenergy. Temperature is crucial for optimizing methane production through inocula preservation and reactor start-up in AD. The preservation of inocula induced by temperature has rarely been assessed from an engineering perspective. There has also been limited exploration of the influence of high-to-moderate temperature transition on the initiation of AD. This study employed continuous mesophilic AD reactors with potential engineering applications to conduct revival tests. These tests evaluated the methane production activity of sludge stored at different temperatures and investigated the impact of high-temperature initiation on mesophilic AD. Additionally, we elucidated the correlation between these assessments and microbial diversity as well as composition. The results indicated that bacterial diversity was higher in the inoculum stored at 35 °C compared to 15 °C, ensuring a stable start-up operation of the mesophilic AD. The richness of the bacteria and diversity of the archaea remained stable during the transition from high to mesophilic temperatures. This was conducive to enhancing methanogenic activity of mesophilic AD initiated at 55 °C. The continuously operated AD system showed significant differences in microbial composition compared to its inoculum. Increased abundance of Coriobacteriaceae and Prevotellaceae led to propionate and butyrate accumulation, respectively, reducing AD operational capacity. Methanogenic archaea were less diverse in AD initiated with low-temperature preserved inoculum compared to that with a medium temperature. Streptococcaceae induced by high temperarure could promote AD stability. Hydrogenotrophic methanogens had a competitive advantage in mesophilic AD due to their prior exposure to high-temperature initiation, possibly influenced by Thermotogaceae. Full article
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