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30 pages, 5350 KB  
Article
Odontocete Occurrence in Highly Trafficked European Straits: Insights from Static Acoustic Monitoring
by María Pérez Tadeo and Joanne O’Brien
J. Mar. Sci. Eng. 2026, 14(16), 1473; https://doi.org/10.3390/jmse14161473 - 10 Aug 2026
Viewed by 405
Abstract
Static Acoustic Monitoring (SAM) using C-PODs, deep C-PODs, and F-PODs was conducted as part of the STRAITS project (Strategic Infrastructure for improved animal Tracking in European Seas), funded under the EU’s Horizon research and innovation programme, to investigate odontocete acoustic occurrence across four [...] Read more.
Static Acoustic Monitoring (SAM) using C-PODs, deep C-PODs, and F-PODs was conducted as part of the STRAITS project (Strategic Infrastructure for improved animal Tracking in European Seas), funded under the EU’s Horizon research and innovation programme, to investigate odontocete acoustic occurrence across four European straits: the North Channel, the Sound, the Strait of Gibraltar, and the Dardanelles Strait. The acoustic presence of dolphin species and harbour porpoises was modelled in relation to tidal cycle, moon phase, sea surface temperature (SST), diel period, season, and Sound Pressure Levels (SPLs), representing ambient underwater sound using a Generalised Additive Modelling (GAM) approach. Harbour porpoises were primarily detected in the Sound and the North Channel, while dolphin detections were higher in the Strait of Gibraltar and the Dardanelles Strait. There was a significant association with SPLs on both species across all locations where it was assessed. There was a significant effect of tidal cycle and SST on both species across all locations except the Dardanelles Strait. Temporal patterns were significant across species and study sites. This study presents the first multi-strait assessment of odontocete occurrence in key marine corridors, highlighting the relationship of environmental and temporal drivers, underwater noise, and odontocete occurrence, and providing insights for marine spatial planning and conservation management in highly trafficked regions. Full article
(This article belongs to the Section Marine Ecology)
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25 pages, 11671 KB  
Article
Spatial Priorities for Protecting the Black Sea Harbour Porpoise: Abundance and Habitat Suitability in Bulgarian Waters
by Venceslav Delov, Krastio Dimitrov, Konstantin Mihaylov, Georgi Terziyski, Yana Stoyanova, Petar Dimov, Nikolay Nedyalkov, Gergana Nikolova, Boris Karakushev and Nikolay Natchev
Oceans 2026, 7(2), 28; https://doi.org/10.3390/oceans7020028 - 20 Mar 2026
Viewed by 1251
Abstract
The Black Sea harbour porpoise (Phocoena phocoena relicta Abel, 1905) is an endemic cetacean with poorly understood spatial ecology in Bulgarian waters. This study aimed to update knowledge on its distribution, abundance, and habitat use throughout the Bulgarian Exclusive Economic Zone (EEZ). [...] Read more.
The Black Sea harbour porpoise (Phocoena phocoena relicta Abel, 1905) is an endemic cetacean with poorly understood spatial ecology in Bulgarian waters. This study aimed to update knowledge on its distribution, abundance, and habitat use throughout the Bulgarian Exclusive Economic Zone (EEZ). We conducted systematic aerial line-transect surveys in all four seasons between October 2022 and October 2023, combined with distance sampling and MaxEnt habitat modelling. Porpoises were present year-round across the EEZ, with marked seasonal shifts in distribution and habitat preferences. Highest densities were observed in spring, while winter distributions were concentrated offshore. Habitat suitability was dynamic, with key high-use areas identified near Cape Emine and in southern offshore waters near the Turkish border. Overall, about 40% of the EEZ represented high-suitability habitat. These findings provide the first comprehensive, year-round baseline for P. p. relicta in Bulgarian waters, highlighting the species’ flexible habitat use and seasonality. The study was conducted under extraordinary conditions due to regional military activity, which may have influenced porpoise behaviour and spatial patterns. The provided results are critical for designing effective conservation and management measures in the face of both natural and anthropogenic pressures and threats. Full article
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16 pages, 5032 KB  
Communication
First Histological Study of the Gastrointestinal Tract and Associated Lymphoid Structures of a Harbour Porpoise (Phocoena phocoena)
by Diego Pérez-Maroto, Ana Balseiro, Patricia Barroso, Ignacio Molpeceres-Diego, Antonio Fernández, Juan Francisco García Marín and Natalia García-Álvarez
Animals 2025, 15(22), 3277; https://doi.org/10.3390/ani15223277 - 13 Nov 2025
Viewed by 1181
Abstract
The current knowledge on the histological structure of the gastrointestinal tract (GIT) in cetaceans is based on general descriptions. The aim of this study was to characterize the histology and expression of immune cell markers in samples from the GIT and lymph nodes [...] Read more.
The current knowledge on the histological structure of the gastrointestinal tract (GIT) in cetaceans is based on general descriptions. The aim of this study was to characterize the histology and expression of immune cell markers in samples from the GIT and lymph nodes (LNs) in a harbour porpoise (Phocoena phocoena) bycaught in the Cantabrian Sea. The thickness of the histological layers of the GIT was measured, being greater in the stomach and anal canal, although no significant differences were found among any intestinal segment (p = 0.448). Variation in thickness, morphology of the folds, and the presence of Peyer’s patches allowed the duodenal ampulla and the distal segments to be distinguished from the rest of the intestine. An immunohistochemical technique was performed to identify the following markers: IBA1 for macrophages, CD3 for T lymphocytes, and CD20 for B lymphocytes. The distribution of immune cells varied significantly along the GIT, with higher percentages of all three cell types in the distal intestine and the anal tonsil. Within the LNs, B lymphocytes represented the predominant cell population. This study provides the first description of the histological structure of the GIT and associated lymphoid tissue in a harbour porpoise, which will be useful for future research studies. Full article
(This article belongs to the Section Veterinary Clinical Studies)
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5 pages, 176 KB  
Commentary
Highly Pathogenic Avian Influenza A(H5N1) Virus: How Far Are We from a New Pandemic?
by Giovanni Di Guardo
Vet. Sci. 2025, 12(6), 566; https://doi.org/10.3390/vetsci12060566 - 9 Jun 2025
Cited by 10 | Viewed by 4546
Abstract
The focus of this commentary is represented by the pandemic risk associated with the highly pathogenic avian influenza (HPAI) A(H5N1) virus, clade 2.3.4.4b. More in detail, the herein dealt pandemic alarm appears to be primarily justified by the huge and progressively growing number [...] Read more.
The focus of this commentary is represented by the pandemic risk associated with the highly pathogenic avian influenza (HPAI) A(H5N1) virus, clade 2.3.4.4b. More in detail, the herein dealt pandemic alarm appears to be primarily justified by the huge and progressively growing number of virus-susceptible domestic and wild birds and mammals, including threatened marine mammal species like South American sea lions and elephant seals as well as harbour porpoises, bottlenose dolphins and polar bears. Of major concern is the susceptibility of dairy cattle to HPAI A(H5N1) virus, particularly the documented and unprecedented colonization of host’s mammary gland tissue, resulting in viral shedding through the milk alongside a large series of cases of infection in dairy farm workers in several USA locations. Despite well-documented zoonotic capability, no evidences of a sustained and efficient HPAI A(H5N1) viral transmission between people have been hitherto reported. If this were to happen sooner or later, a new pandemic might consequently arise. Therefore, keeping all this in mind and based upon the lessons taught by the COVID-19 pandemic, a “One Health, One Earth, One Ocean”-centered approach would be absolutely needed in order to deal in the most appropriate way with the HPAI A(H5N1) virus-associated zoonotic and pandemic risk. Full article
(This article belongs to the Section Veterinary Microbiology, Parasitology and Immunology)
13 pages, 13253 KB  
Article
Cetacean Strandings along the Bulgarian Coast of the Black Sea in 2010–2022
by Dimitar Popov and Galina Meshkova
Oceans 2024, 5(3), 429-441; https://doi.org/10.3390/oceans5030025 - 26 Jun 2024
Cited by 2 | Viewed by 3850
Abstract
Cetacean strandings are valuable sources of data about their life history, health status, population trends, and impact of threats. We examined the strandings along the Bulgarian coast of the Black Sea for a period of 13 years from 2010 to 2022. A total [...] Read more.
Cetacean strandings are valuable sources of data about their life history, health status, population trends, and impact of threats. We examined the strandings along the Bulgarian coast of the Black Sea for a period of 13 years from 2010 to 2022. A total of 1528 cetacean strandings of all three species inhabiting the basin were recorded: 1031 harbour porpoises Phocoena phocoena, 199 bottlenose dolphins Tursiops truncatus, 97 common dolphins Delphinus delphis, 19 delphinids and 182 unidentified. The highest numbers were observed in 2016 and 2022. Monthly peaks for harbour porpoise and bottlenose dolphin were in July and August and for common dolphin in May. An unusually high mortality of porpoise neonates was recorded in 2015 and 2016. The overall sex ratio showed a slightly higher share of males at 120:100. This bias was the most pronounced for males of common dolphins. Spatial distribution varied interspecifically but was predominantly along the southern coast. Bycatch signs were detected in 80 animals including during the turbot fishing ban period, suggesting the existence of illegal fishing operations. All of this highlights the need for better reinforcement and control to ensure both the conservation of endangered cetaceans and the sustainability of fisheries. Improvement in data collection is needed to improve the quality of information. Full article
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15 pages, 1418 KB  
Article
Investigation of Spatiotemporal Patterns of Harbour Porpoise (Phocoena phocoena) Strandings in Swedish Waters for Improved Monitoring and Management
by Vigge Ulfsson, Hyeyoung Kim, Linnea Cervin, Anna Roos and Aleksija Neimanis
Oceans 2024, 5(2), 166-180; https://doi.org/10.3390/oceans5020010 - 29 Mar 2024
Cited by 2 | Viewed by 3465
Abstract
Harbour porpoises (Phocoena phocoena) are the only cetacean residents found year-round in Swedish waters and they are exposed to numerous natural and anthropogenic threats. Since the in situ monitoring of cetaceans can be difficult, invasive and often expensive, investigation of stranding patterns [...] Read more.
Harbour porpoises (Phocoena phocoena) are the only cetacean residents found year-round in Swedish waters and they are exposed to numerous natural and anthropogenic threats. Since the in situ monitoring of cetaceans can be difficult, invasive and often expensive, investigation of stranding patterns and examination of stranded animals can be used as a cost-effective source of data to study these elusive animals. The aim of this study was to investigate the spatiotemporal patterns of harbour porpoise stranding reports and the possible underlying causes in Swedish waters over a ten-year period (2014–2023). Additionally, the Swedish stranding network plays a key role in the collection of stranded carcasses for health and disease surveillance, and geographic coverage of the network also was analysed. When making spatial comparisons, the ten-year period was divided into two five-year blocks. Data on 854 stranded harbour porpoises were analysed from the coasts of the Skagerrak, Kattegat, and Baltic Seas. Both significant spatial and temporal patterns could be identified. Strandings peaked in July through September and hotspots occurred along most of the Swedish west coast, with the most frequent hotspots located around Öresund and especially the area around the Kullen peninsula. The spatial patterns of strandings found in this study are consistent with data on porpoise abundance, prey abundance, and gillnet fisheries’ efforts. The latter is known to be one of the primary causes of porpoise mortality. Furthermore, the coverage of the Swedish stranding network increased between the two periods, likely reflecting an increased awareness of the carcass-based surveillance program, and gaps requiring network expansion efforts were identified. These results also provide baseline data to enable the continued monitoring of stranding trends, as changes may indicate changes in population distribution, size or mortality rates. Full article
(This article belongs to the Special Issue Marine Mammals in a Changing World, 2nd Edition)
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12 pages, 4644 KB  
Article
Preliminary Study on Microplastic Contamination in Black Sea Cetaceans: Gastrointestinal Analysis of Phocoena phocoena relicta and Tursiops truncatus ponticus
by Adrian Filimon, Andreea-Mădălina Ciucă, George-Emanuel Harcotă and Elena Stoica
Animals 2024, 14(6), 886; https://doi.org/10.3390/ani14060886 - 13 Mar 2024
Cited by 9 | Viewed by 3446
Abstract
Plastic pollution is a global concern that has a significant impact on marine life. Plastic is widely used and has become a pervasive pollutant in marine environments. Plastic contamination has been documented both in marine environments and biota. Plastic contamination in cetacean gastro-intestinal [...] Read more.
Plastic pollution is a global concern that has a significant impact on marine life. Plastic is widely used and has become a pervasive pollutant in marine environments. Plastic contamination has been documented both in marine environments and biota. Plastic contamination in cetacean gastro-intestinal tract (GIT) content has received limited attention, especially in the Black Sea. This study aims to investigate plastic contamination in the GITs of bottlenose dolphins and harbour porpoises, introducing a novel methodology. Given the limited exploration of this issue in the Black Sea, the research predominantly focuses on microplastic contamination. The GITs were sampled through necropsy from stranded and by-caught cetaceans, and content was washed through a multi-sieves tool. The material retained on each sieve was analysed following specific protocols. All (100%) of the GITs contained plastics (meso- and microplastics). In total, 1059 items (fibres, fragments, and beads) ranging from 22.86 µm to 5776 µm were found, suggesting a high contamination level in the Black Sea cetaceans. Future efforts should concentrate on increasing the number of samples and using the results for the implementation of the Marine Strategy Framework Directive (MSFD). Full article
(This article belongs to the Special Issue Threats to Cetacean Health)
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19 pages, 809 KB  
Article
Microplastics in Cetaceans Stranded on the Portuguese Coast
by Sara Sá, Andreia Torres-Pereira, Marisa Ferreira, Sílvia S. Monteiro, Raquel Fradoca, Marina Sequeira, José Vingada and Catarina Eira
Animals 2023, 13(20), 3263; https://doi.org/10.3390/ani13203263 - 19 Oct 2023
Cited by 14 | Viewed by 4468
Abstract
This study characterises microplastics in small cetaceans on the coast of Portugal and assesses the relationship between several biological variables and the amount of detected microplastics. The intestines of 38 stranded dead cetaceans were processed in the laboratory, with digestion methods adapted to [...] Read more.
This study characterises microplastics in small cetaceans on the coast of Portugal and assesses the relationship between several biological variables and the amount of detected microplastics. The intestines of 38 stranded dead cetaceans were processed in the laboratory, with digestion methods adapted to the amount of organic matter in each sample. The influence of several biological and health variables (e.g., species, sex, body condition) on the amount of microplastics was tested in all analysed species and particularly in common dolphins, due to the larger number of available samples. Most of the analysed individuals had microplastics in the intestine (92.11%), with harbour porpoises revealing a significantly higher median number of microplastics than common dolphins, probably due to their different diets, use of habitat and feeding strategies. None of the other tested variables significantly influenced the number of microplastics. Moreover, the microplastics found should not be enough to cause physical or chemical sublethal effects, although the correlation between microplastic ingestion and plastic additive bioaccumulation in cetacean tissues requires further investigation. Future monitoring in biota should rely on improved and standardised protocols for microplastic analyses in complex samples to allow for accurate analyses of larger samples and spatio-temporal comparisons. Full article
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16 pages, 3262 KB  
Article
Assessment of Harbour Porpoise Bycatch along the Portuguese and Galician Coast: Insights from Strandings over Two Decades
by Andreia Torres-Pereira, Hélder Araújo, Silvia Silva Monteiro, Marisa Ferreira, Jorge Bastos-Santos, Sara Sá, Lídia Nicolau, Ana Marçalo, Carina Marques, Ana Sofia Tavares, Myriam De Bonis, Pablo Covelo, José Martínez-Cedeira, Alfredo López, Marina Sequeira, José Vingada and Catarina Eira
Animals 2023, 13(16), 2632; https://doi.org/10.3390/ani13162632 - 15 Aug 2023
Cited by 15 | Viewed by 3538
Abstract
The Iberian harbour porpoise population is small and fisheries bycatch has been described as one of its most important threats. Data on harbour porpoise strandings collected by the Portuguese and Galician stranding networks between 2000 and 2020 are indicative of a recent mortality [...] Read more.
The Iberian harbour porpoise population is small and fisheries bycatch has been described as one of its most important threats. Data on harbour porpoise strandings collected by the Portuguese and Galician stranding networks between 2000 and 2020 are indicative of a recent mortality increase in the western Iberian coast (particularly in northern Portugal). Overall, in Portugal and Galicia, individuals stranded due to confirmed fishery interaction represented 46.98% of all analysed porpoises, and individuals stranded due to probable fishery interaction represented another 10.99% of all analysed porpoises. Considering the Portuguese annual abundance estimates available between 2011 and 2015, it was possible to calculate that an annual average of 207 individuals was removed from the population in Portuguese waters alone, which largely surpasses the potential biological removal (PBR) estimates (22 porpoises, CI: 12–43) for the same period. These results are conservative and bycatch values from strandings are likely underestimated. A structured action plan accounting for new activities at sea is needed to limit the Iberian porpoise population decline. Meanwhile, there is an urgent need for a fishing effort reorganization to directly decrease porpoise mortality. Full article
(This article belongs to the Section Aquatic Animals)
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13 pages, 1195 KB  
Article
Screening for Influenza and Morbillivirus in Seals and Porpoises in the Baltic and North Sea
by Iben Stokholm, Christine Baechlein, Sara Persson, Anna Roos, Anders Galatius, Line Anker Kyhn, Signe Sveegaard, Charlotte Bie Thøstesen, Morten Tange Olsen, Paul Becher and Ursula Siebert
Pathogens 2023, 12(3), 357; https://doi.org/10.3390/pathogens12030357 - 21 Feb 2023
Cited by 9 | Viewed by 4849
Abstract
Historically, the seals and harbour porpoises of the Baltic Sea and North Sea have been subjected to hunting, chemical pollutants and repeated mass mortalities, leading to significant population fluctuations. Despite the conservation implications and the zoonotic potential associated with viral disease outbreaks in [...] Read more.
Historically, the seals and harbour porpoises of the Baltic Sea and North Sea have been subjected to hunting, chemical pollutants and repeated mass mortalities, leading to significant population fluctuations. Despite the conservation implications and the zoonotic potential associated with viral disease outbreaks in wildlife, limited information is available on the circulation of viral pathogens in Baltic Sea seals and harbour porpoises. Here, we investigated the presence of the influenza A virus (IAV), the phocine distemper virus (PDV) and the cetacean morbillivirus (CeMV) in tracheal swabs and lung tissue samples from 99 harbour seals, 126 grey seals, 73 ringed seals and 78 harbour porpoises collected in the Baltic Sea and North Sea between 2002–2019. Despite screening 376 marine mammals collected over nearly two decades, we only detected one case of PDV and two cases of IAV linked to the documented viral outbreaks in seals in 2002 and 2014, respectively. Although we find no evidence of PDV and IAV during intermediate years, reports of isolated cases of PDV in North Sea harbour seals and IAV (H5N8) in Baltic and North Sea grey seals suggest introductions of those pathogens within the sampling period. Thus, to aid future monitoring efforts we highlight the need for a standardized and continuous sample collection of swabs, tissue and blood samples across Baltic Sea countries. Full article
(This article belongs to the Special Issue Wildlife Hosts Pathogen Interaction)
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15 pages, 4045 KB  
Article
Seasonal Abundance, Density and Distribution of Cetaceans in the Bulgarian Black Sea Shelf in 2017
by Dimitar Popov, Marina Panayotova, Radoslava Bekova, Hristo Dimitrov and Galina Meshkova
Diversity 2023, 15(2), 229; https://doi.org/10.3390/d15020229 - 6 Feb 2023
Cited by 4 | Viewed by 4520
Abstract
Black Sea cetaceans are isolated and nominated as endemic subspecies listed in the IUCN Red List of Endangered species: the harbour porpoise and bottlenose dolphin as Endangered (EN) and the common dolphin as Vulnerable (VU). Studies of their distribution and abundance are scarce [...] Read more.
Black Sea cetaceans are isolated and nominated as endemic subspecies listed in the IUCN Red List of Endangered species: the harbour porpoise and bottlenose dolphin as Endangered (EN) and the common dolphin as Vulnerable (VU). Studies of their distribution and abundance are scarce but obligatory for assessment of their conservation status. Being highly mobile apex predators entails large variations in spatial and temporal distribution. Two vessel line–transect distance sampling surveys were conducted in 2017 in the Bulgarian shelf with the aim to estimate the density, abundance and distribution during spring and autumn. Results have revealed a shift from the coastal to offshore shelf of harbour porpoises with marked southern movement. Density of porpoises varied from 1.423 ind./km2 (CV = 25.4%) in spring to 0.576 ind./km2 (CV = 43.43%) in autumn. The density of common dolphins was also decreasing, from 0.391 ind./km2 (CV = 36.84%) to 0.088 ind./km2 (CV = 42.13%), which was more significant in offshore (0.031 ind./km2, CV = 58.04%) than in the coastal shelf (0.138 ind./km2, CV = 48.59%). Bottlenose dolphins had almost constant density in both seasons in the coastal shelf: 0.211 ind./km2 (CV = 52.15%) and 0.187 ind./km2 (CV = 52.13%) but a very low density in the offshore shelf in autumn: 0.042 ind./km2 (CV = 71.07%). The importance of existing NATURA 2000 sites for the harbour porpoise (BG0000621 Shabla-Ezerets, BG0000573 Kompleks Kaliaka, BG0001001 Ropotamo and BG0001007 Strandzha) and bottlenose dolphin (BG0000621 Shabla-Ezerets, BG0000573 Kompleks Kaliaka, BG0001501 Emona and BG0001001 Ropotamo) were confirmed. Full article
(This article belongs to the Special Issue Biodiversity Research in Bulgaria)
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14 pages, 2195 KB  
Review
Tattoo Skin Disease in Cetacea: A Review, with New Cases for the Northeast Pacific
by Marie-Françoise Van Bressem, Koen Van Waerebeek and Pádraig J. Duignan
Animals 2022, 12(24), 3581; https://doi.org/10.3390/ani12243581 - 18 Dec 2022
Cited by 18 | Viewed by 5550
Abstract
Tattoo skin disease (TSD) is a poxviral dermatopathy diagnosed in cetaceans. We review the literature on TSD aetiology, clinical characteristics, pathology and epidemiology and evaluate immune responses against the virus. In addition, necropsy reports for fifty-five harbour porpoises (Phocoena phocoena), twenty-two [...] Read more.
Tattoo skin disease (TSD) is a poxviral dermatopathy diagnosed in cetaceans. We review the literature on TSD aetiology, clinical characteristics, pathology and epidemiology and evaluate immune responses against the virus. In addition, necropsy reports for fifty-five harbour porpoises (Phocoena phocoena), twenty-two Delphinidae and four Kogiidae stranded in northern California in 2018–2021 were checked for diagnostic tattoo lesions. TSD occurs in the Mediterranean, North and Barents Seas, as well as in the Atlantic, eastern Pacific and Indian Oceans in at least 21 cetacean species, with varying prevalence. Two cetacean poxvirus (CePV) clades are recognised: CePV-1 in odontocetes and CePV-2 in mysticetes. CePV-1 isolates were recovered from six Delphinidae and one Phocoenidae in the Americas, Europe and Hong Kong. Strains from Delphinidae are closely related. Among Phocoenidae, poxviruses were sampled only in harbour porpoises around the British Isles. CePV-2 isolates were obtained from southern right whales (Eubalaena australis) and a bowhead whale (Balaena mysticetus). In healthy animals, an immune response develops over time, with young calves protected by maternal immunity. Salinity and sea surface temperature do not seem to influence TSD prevalence in free-ranging cetaceans. High concentrations of immunotoxic halogenated organochlorines may cause a more severe clinical disease. Substitution and loss of genes involved in anti-viral immunity may favour CePV entry, replication and persistence in the epidermis. Off California, Delphinidae were less often (26.3%) affected by TSD than harbour porpoises (43.6%). Male porpoises were significantly more prone (58.1%) to show clinical disease than females (25%). Among males, TSD affected a high proportion of juveniles and subadults. TSD was not detected in the Kogiidae. Full article
(This article belongs to the Special Issue Frontiers in Marine Mammal Health and Immunity)
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23 pages, 2181 KB  
Article
Occurrence of Antimicrobial-Resistant Escherichia coli in Marine Mammals of the North and Baltic Seas: Sentinels for Human Health
by Stephanie Gross, Anja Müller, Diana Seinige, Peter Wohlsein, Manuela Oliveira, Dieter Steinhagen, Corinna Kehrenberg and Ursula Siebert
Antibiotics 2022, 11(9), 1248; https://doi.org/10.3390/antibiotics11091248 - 14 Sep 2022
Cited by 16 | Viewed by 4896
Abstract
Antimicrobial resistance is a global health threat that involves complex, opaque transmission processes in the environment. In particular, wildlife appears to function as a reservoir and vector for antimicrobial-resistant bacteria as well as resistance genes. In the present study, the occurrence of antimicrobial-resistant [...] Read more.
Antimicrobial resistance is a global health threat that involves complex, opaque transmission processes in the environment. In particular, wildlife appears to function as a reservoir and vector for antimicrobial-resistant bacteria as well as resistance genes. In the present study, the occurrence of antimicrobial-resistant Escherichia coli was determined in marine mammals and various fish species of the North and Baltic Seas. Rectal or faecal swabs were collected from 66 live-caught or stranded marine mammals and 40 fish specimens. The antimicrobial resistance phenotypes and genotypes of isolated E. coli were determined using disk diffusion tests and PCR assays. Furthermore, isolates were assigned to the four major phylogenetic groups of E. coli. Additionally, post mortem examinations were performed on 41 of the sampled marine mammals. The investigations revealed resistant E. coli in 39.4% of the marine mammal samples, while no resistant isolates were obtained from any of the fish samples. The obtained isolates most frequently exhibited resistance against aminoglycosides, followed by β-lactams. Of the isolates, 37.2% showed multidrug resistance. Harbour porpoises (Phocoena phocoena) mainly carried E. coli isolates belonging to the phylogenetic group B1, while seal isolates were most frequently assigned to group B2. Regarding antimicrobial resistance, no significant differences were seen between the two sampling areas or different health parameters, but multidrug-resistant isolates were more frequent in harbour porpoises than in the sampled seals. The presented results provide information on the distribution of antimicrobial-resistant bacteria in the North and Baltic Seas, and highlight the role of these resident marine mammal species as sentinels from a One Health perspective. Full article
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21 pages, 2612 KB  
Article
Harbour Porpoise Abundance in Portugal over a 5-Year Period and Estimates of Potential Distribution
by Andreia Torres-Pereira, Hélder Araújo, Fábio L. Matos, Jorge Bastos-Santos, Sara Sá, Marisa Ferreira, José Martínez-Cedeira, Alfredo López, Marina Sequeira, José Vingada and Catarina Eira
Animals 2022, 12(15), 1935; https://doi.org/10.3390/ani12151935 - 29 Jul 2022
Cited by 5 | Viewed by 5603
Abstract
The Iberian porpoise population is small and under potentially unsustainable removal by fisheries bycatch. Recently, a marine Site of Community Importance (SCI) was legally approved in Portugal, but no measures ensued to promote porpoise conservation. Information about porpoise abundance and distribution is fundamental [...] Read more.
The Iberian porpoise population is small and under potentially unsustainable removal by fisheries bycatch. Recently, a marine Site of Community Importance (SCI) was legally approved in Portugal, but no measures ensued to promote porpoise conservation. Information about porpoise abundance and distribution is fundamental to guide any future conservation measures. Annual aerial surveys conducted between 2011 and 2015 show a low overall porpoise abundance and density (2254 individuals; 0.090 ind/km2, CV = 21.99%) in the Portuguese coast. The highest annual porpoise estimates were registered in 2013 (3207 individuals, 0.128 ind/km2), followed by a sharp decrease in 2014 (1653 individuals, 0.066 ind/km2). The porpoise density and abundance estimated in 2015 remained lower than the 2013 estimates. A potential distribution analysis of the Iberian porpoise population was performed using ensembles of small models (ESMs) with MaxEnt and showed that the overall habitat suitability is particularly high in the Portuguese northern area. The analysis also suggested a different pattern in porpoise potential distribution across the study period. These results emphasize the importance of further porpoise population assessments to fully understand the spatial and temporal porpoise habitat use in the Iberian Peninsula as well as the urgent need for on-site threat mitigation measures. Full article
(This article belongs to the Section Mammals)
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13 pages, 858 KB  
Article
Occurrence of Microplastics in Harbour Seals (Phoca vitulina) and Grey Seals (Halichoerus grypus) from German Waters
by Carolin Philipp, Bianca Unger and Ursula Siebert
Animals 2022, 12(5), 551; https://doi.org/10.3390/ani12050551 - 23 Feb 2022
Cited by 14 | Viewed by 4511
Abstract
The level of knowledge on microplastic exposure in marine mammals is limited by the access to dead and alive individuals. Focusing on the Northeast Atlantic area, some studies already confirmed the microplastic presence in free-ranging marine mammals, such as harbour porpoises or harbour [...] Read more.
The level of knowledge on microplastic exposure in marine mammals is limited by the access to dead and alive individuals. Focusing on the Northeast Atlantic area, some studies already confirmed the microplastic presence in free-ranging marine mammals, such as harbour porpoises or harbour seals inhabiting the North Sea (NS). In contrast, knowledge on the exposure to grey seals and particularly on specimen inhabiting the Baltic Sea (BS) are scarce. This study examined 63 gastrointestinal tracts (GIT) of harbour seals and grey seals originating from German waters (NS and BS) found between 2014 and 2019. Besides the documentation of microplastic findings, this study is dealing with life history and health parameters, attempting to identify correlations with microplastic presence. This study confirmed beside the presence, the egestion of microplastics (>100 µm; MPs) in the examined seals, without correlations in parasite infestations or inflammation responses. 540 suspected MPs were identified in 62 intestinal samples (42% fibres, 58% fragments), and 228 MPs in seven stomachs (28% fibres, 72% fragments). In accordance, first evidence of the retainment of fragments in the GIT were given. However, no significant difference in MP occurrence was indicated for different sex or age groups. Full article
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